RNA–Protein interactions for RNA: ENST00000537877.5

DDB1-209, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-209ENST00000537877 ADGRB2O60241 1585 aa17.08■□□□□ 0.32
DDB1-209ENST00000537877 NWD1Q149M9 1564 aa17.07■□□□□ 0.32
DDB1-209ENST00000537877 ROBO2Q9HCK4 1378 aa17.06■□□□□ 0.32
DDB1-209ENST00000537877 NCKAP5LQ9HCH0 1330 aa17.05■□□□□ 0.32
DDB1-209ENST00000537877 PLEKHH1Q9ULM0 1364 aa17.05■□□□□ 0.32
DDB1-209ENST00000537877 AMOTL2Q9Y2J4 779 aa17.04■□□□□ 0.32
DDB1-209ENST00000537877 SAFB2Q14151 953 aaKnown RBP eCLIP17.03■□□□□ 0.32
DDB1-209ENST00000537877 WAPLQ7Z5K2 1190 aa17.02■□□□□ 0.32
DDB1-209ENST00000537877 MINK1Q8N4C8 1332 aaPredicted RBP17.02■□□□□ 0.32
DDB1-209ENST00000537877 ATAD2Q6PL18 1390 aa17.02■□□□□ 0.31
DDB1-209ENST00000537877 NINLQ9Y2I6 1382 aa17.02■□□□□ 0.31
DDB1-209ENST00000537877 STRCQ7RTU9 1775 aa17.01■□□□□ 0.31
DDB1-209ENST00000537877 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.01■□□□□ 0.31
DDB1-209ENST00000537877 HSPA2P54652 639 aa17.01■□□□□ 0.31
DDB1-209ENST00000537877 ANP32CO43423 234 aa17■□□□□ 0.31
DDB1-209ENST00000537877 NKTRP30414 1462 aaKnown RBP16.99■□□□□ 0.31
DDB1-209ENST00000537877 MIER1Q8N108 512 aa16.99■□□□□ 0.31
DDB1-209ENST00000537877 KCNA6P17658 529 aa16.98■□□□□ 0.31
DDB1-209ENST00000537877 SRPK2P78362 688 aaKnown RBP16.97■□□□□ 0.31
DDB1-209ENST00000537877 WASLO00401 505 aaPredicted RBP16.96■□□□□ 0.31
DDB1-209ENST00000537877 CDK19Q9BWU1 502 aa16.95■□□□□ 0.3
DDB1-209ENST00000537877 PANK3Q9H999 370 aa16.95■□□□□ 0.3
DDB1-209ENST00000537877 CABP2Q9NPB3 220 aa16.95■□□□□ 0.3
DDB1-209ENST00000537877 CDC42BPGQ6DT37 1551 aa16.95■□□□□ 0.3
DDB1-209ENST00000537877 NALCNQ8IZF0 1738 aa16.95■□□□□ 0.3
DDB1-209ENST00000537877 USP32Q8NFA0 1604 aa16.94■□□□□ 0.3
DDB1-209ENST00000537877 TOPAZ1Q8N9V7 1692 aa16.93■□□□□ 0.3
DDB1-209ENST00000537877 KTN1Q86UP2 1357 aaKnown RBP16.93■□□□□ 0.3
DDB1-209ENST00000537877 ANKRD36BQ8N2N9 1353 aa16.93■□□□□ 0.3
DDB1-209ENST00000537877 ATP7BP35670 1465 aa16.93■□□□□ 0.3
DDB1-209ENST00000537877 ADGRL3Q9HAR2 1447 aa16.93■□□□□ 0.3
DDB1-209ENST00000537877 PER1O15534 1290 aaPredicted RBP16.92■□□□□ 0.3
DDB1-209ENST00000537877 ITSN1Q15811 1721 aa16.92■□□□□ 0.3
DDB1-209ENST00000537877 FMN2Q9NZ56 1722 aa16.92■□□□□ 0.3
DDB1-209ENST00000537877 STRCP1A6NGW2 1772 aa16.9■□□□□ 0.3
DDB1-209ENST00000537877 NPC1L1Q9UHC9 1359 aa16.9■□□□□ 0.3
DDB1-209ENST00000537877 TMC1Q8TDI8 760 aa16.9■□□□□ 0.3
DDB1-209ENST00000537877 PRKRIP1Q9H875 184 aaPredicted RBP16.9■□□□□ 0.3
DDB1-209ENST00000537877 ANKARQ7Z5J8 1434 aa16.9■□□□□ 0.3
DDB1-209ENST00000537877 KNSTRNQ9Y448 316 aa16.89■□□□□ 0.3
DDB1-209ENST00000537877 CCER2I3L3R5 266 aa16.89■□□□□ 0.29
DDB1-209ENST00000537877 SLC12A5Q9H2X9 1139 aa16.89■□□□□ 0.29
DDB1-209ENST00000537877 NCOA3Q9Y6Q9 1424 aa16.88■□□□□ 0.29
DDB1-209ENST00000537877 CD163L1Q9NR16 1453 aa16.88■□□□□ 0.29
DDB1-209ENST00000537877 PPIP5K1Q6PFW1 1433 aa16.88■□□□□ 0.29
DDB1-209ENST00000537877 A0A1W2PP64 1363 aa16.87■□□□□ 0.29
DDB1-209ENST00000537877 NUDT16Q96DE0 195 aaKnown RBP16.87■□□□□ 0.29
DDB1-209ENST00000537877 NSD3Q9BZ95 1437 aa16.87■□□□□ 0.29
DDB1-209ENST00000537877 TERF2IPQ9NYB0 399 aa16.87■□□□□ 0.29
DDB1-209ENST00000537877 DMRT2Q9Y5R5 561 aa16.87■□□□□ 0.29
DDB1-209ENST00000537877 PARD3Q8TEW0 1356 aa16.86■□□□□ 0.29
DDB1-209ENST00000537877 CCDC61Q9Y6R9 512 aa16.86■□□□□ 0.29
DDB1-209ENST00000537877 PRR36Q9H6K5 1346 aa16.86■□□□□ 0.29
DDB1-209ENST00000537877 AKAP12Q02952 1782 aa16.85■□□□□ 0.29
DDB1-209ENST00000537877 RALBP1Q15311 655 aa16.85■□□□□ 0.29
DDB1-209ENST00000537877 HDGFL2Q7Z4V5 671 aaPredicted RBP16.85■□□□□ 0.29
DDB1-209ENST00000537877 MON2Q7Z3U7 1717 aa16.85■□□□□ 0.29
DDB1-209ENST00000537877 AMER1Q5JTC6 1135 aaPredicted RBP16.84■□□□□ 0.29
DDB1-209ENST00000537877 PROSER2Q86WR7 435 aaPredicted RBP16.84■□□□□ 0.29
DDB1-209ENST00000537877 CARD14Q9BXL6 1004 aa16.84■□□□□ 0.29
DDB1-209ENST00000537877 CABP1Q9NZU7 370 aa16.84■□□□□ 0.29
DDB1-209ENST00000537877 DCCP43146 1447 aa16.83■□□□□ 0.29
DDB1-209ENST00000537877 CPSF1Q10570 1443 aaKnown RBP16.83■□□□□ 0.29
DDB1-209ENST00000537877 NSD2O96028 1365 aa16.83■□□□□ 0.28
DDB1-209ENST00000537877 ANKRD26Q9UPS8 1709 aa16.81■□□□□ 0.28
DDB1-209ENST00000537877 CGNL1Q0VF96 1302 aa16.81■□□□□ 0.28
DDB1-209ENST00000537877 TMEM94Q12767 1356 aa16.81■□□□□ 0.28
DDB1-209ENST00000537877 RGPD8O14715 1765 aaPredicted RBP16.8■□□□□ 0.28
DDB1-209ENST00000537877 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
DDB1-209ENST00000537877 PLEKHG3A1L390 1219 aa16.8■□□□□ 0.28
DDB1-209ENST00000537877 C14orf37Q86TY3 774 aa16.8■□□□□ 0.28
DDB1-209ENST00000537877 MYBBP1AQ9BQG0 1328 aaKnown RBP16.8■□□□□ 0.28
DDB1-209ENST00000537877 EDC4Q6P2E9 1401 aaKnown RBP16.8■□□□□ 0.28
DDB1-209ENST00000537877 NRKQ7Z2Y5 1582 aa16.8■□□□□ 0.28
DDB1-209ENST00000537877 CC2D1BQ5T0F9 858 aaKnown RBP16.79■□□□□ 0.28
DDB1-209ENST00000537877 XIRP1Q702N8 1843 aaKnown RBP16.79■□□□□ 0.28
DDB1-209ENST00000537877 LRRC7Q96NW7 1537 aa16.78■□□□□ 0.28
DDB1-209ENST00000537877 POLR3AO14802 1390 aaPredicted RBP16.78■□□□□ 0.28
DDB1-209ENST00000537877 ZNF335Q9H4Z2 1342 aaPredicted RBP16.77■□□□□ 0.28
DDB1-209ENST00000537877 ZNF692Q9BU19 519 aaPredicted RBP16.77■□□□□ 0.28
DDB1-209ENST00000537877 C19orf44Q9H6X5 657 aa16.77■□□□□ 0.28
DDB1-209ENST00000537877 RBM33Q96EV2 1170 aaKnown RBP16.77■□□□□ 0.27
DDB1-209ENST00000537877 BRD4O60885 1362 aaPredicted RBP16.76■□□□□ 0.27
DDB1-209ENST00000537877 KIF1AQ12756 1690 aa16.76■□□□□ 0.27
DDB1-209ENST00000537877 NUTM2FA1L443 756 aa16.76■□□□□ 0.27
DDB1-209ENST00000537877 CNGB1Q14028 1251 aaPredicted RBP16.76■□□□□ 0.27
DDB1-209ENST00000537877 USP6P35125 1406 aa16.75■□□□□ 0.27
DDB1-209ENST00000537877 MSH6P52701 1360 aa16.75■□□□□ 0.27
DDB1-209ENST00000537877 ACEP12821 1306 aa16.75■□□□□ 0.27
DDB1-209ENST00000537877 NLRP13Q86W25 1043 aa16.75■□□□□ 0.27
DDB1-209ENST00000537877 C1orf167Q5SNV9 1468 aa16.72■□□□□ 0.27
DDB1-209ENST00000537877 MRS2Q9HD23 443 aa16.72■□□□□ 0.27
DDB1-209ENST00000537877 MST1RQ04912 1400 aa16.72■□□□□ 0.27
DDB1-209ENST00000537877 ATF3P18847 181 aa16.71■□□□□ 0.27
DDB1-209ENST00000537877 SSH2Q76I76 1423 aa16.71■□□□□ 0.27
DDB1-209ENST00000537877 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
DDB1-209ENST00000537877 MORC1Q86VD1 984 aa16.7■□□□□ 0.26
DDB1-209ENST00000537877 NGDNQ8NEJ9 315 aaKnown RBP16.7■□□□□ 0.26
DDB1-209ENST00000537877 PHF8Q9UPP1 1060 aa16.7■□□□□ 0.26
DDB1-209ENST00000537877 TTC21AQ8NDW8 1320 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms