RNA–Protein interactions for RNA: ENST00000537466.6

GPN3-202, Transcript of GPN-loop GTPase 3, humanhuman

TSL 1 (best) BASIC

Gene GPN3, Length 1,491 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-202ENST00000537466 NHSL1Q5SYE7 1610 aa25.07■■□□□ 1.6
GPN3-202ENST00000537466 C1orf167Q5SNV9 1468 aa25.06■■□□□ 1.6
GPN3-202ENST00000537466 L3MBTL2Q969R5 705 aa25.06■■□□□ 1.6
GPN3-202ENST00000537466 SIRT1Q96EB6 747 aa25.06■■□□□ 1.6
GPN3-202ENST00000537466 ARHGEF28Q8N1W1 1705 aaKnown RBP25.05■■□□□ 1.6
GPN3-202ENST00000537466 MED1Q15648 1581 aaPredicted RBP25.05■■□□□ 1.6
GPN3-202ENST00000537466 FMN2Q9NZ56 1722 aa25.05■■□□□ 1.6
GPN3-202ENST00000537466 TRAK1Q9UPV9 953 aa25.03■■□□□ 1.6
GPN3-202ENST00000537466 PRAM1Q96QH2 718 aa25.02■■□□□ 1.6
GPN3-202ENST00000537466 RGPD8O14715 1765 aaPredicted RBP25.01■■□□□ 1.59
GPN3-202ENST00000537466 SAFB2Q14151 953 aaKnown RBP eCLIP25.01■■□□□ 1.59
GPN3-202ENST00000537466 PCGF6Q9BYE7 350 aa25.01■■□□□ 1.59
GPN3-202ENST00000537466 DISP3Q9P2K9 1392 aa24.99■■□□□ 1.59
GPN3-202ENST00000537466 TRPM1Q7Z4N2 1603 aa24.99■■□□□ 1.59
GPN3-202ENST00000537466 ORAI2Q96SN7 254 aa24.98■■□□□ 1.59
GPN3-202ENST00000537466 NBPF1Q3BBV0 1214 aa24.97■■□□□ 1.59
GPN3-202ENST00000537466 POGKQ9P215 609 aa24.97■■□□□ 1.59
GPN3-202ENST00000537466 DDX17Q92841 729 aaKnown RBP24.96■■□□□ 1.59
GPN3-202ENST00000537466 ADGRB2O60241 1585 aa24.96■■□□□ 1.59
GPN3-202ENST00000537466 NUTM2FA1L443 756 aa24.96■■□□□ 1.59
GPN3-202ENST00000537466 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
GPN3-202ENST00000537466 JCADQ9P266 1359 aa24.93■■□□□ 1.58
GPN3-202ENST00000537466 USP32Q8NFA0 1604 aa24.91■■□□□ 1.58
GPN3-202ENST00000537466 ESCO1Q5FWF5 840 aa24.9■■□□□ 1.58
GPN3-202ENST00000537466 MINK1Q8N4C8 1332 aaPredicted RBP24.9■■□□□ 1.58
GPN3-202ENST00000537466 HIRIP3Q9BW71 556 aaPredicted RBP24.89■■□□□ 1.58
GPN3-202ENST00000537466 KIF1AQ12756 1690 aa24.88■■□□□ 1.57
GPN3-202ENST00000537466 TONSLQ96HA7 1378 aa24.88■■□□□ 1.57
GPN3-202ENST00000537466 NBPF8Q3BBV2 869 aa24.86■■□□□ 1.57
GPN3-202ENST00000537466 QRICH2Q9H0J4 1663 aa24.85■■□□□ 1.57
GPN3-202ENST00000537466 SOS2Q07890 1332 aaPredicted RBP24.84■■□□□ 1.57
GPN3-202ENST00000537466 PXDNQ92626 1479 aa24.83■■□□□ 1.57
GPN3-202ENST00000537466 LRRC59Q96AG4 307 aaKnown RBP24.83■■□□□ 1.56
GPN3-202ENST00000537466 LRP6O75581 1613 aa24.82■■□□□ 1.56
GPN3-202ENST00000537466 TULP4Q9NRJ4 1543 aa24.82■■□□□ 1.56
GPN3-202ENST00000537466 FOXO3O43524 673 aa24.82■■□□□ 1.56
GPN3-202ENST00000537466 ANKARQ7Z5J8 1434 aa24.81■■□□□ 1.56
GPN3-202ENST00000537466 ROCK2O75116 1388 aaKnown RBP24.81■■□□□ 1.56
GPN3-202ENST00000537466 NPHP3Q7Z494 1330 aa24.8■■□□□ 1.56
GPN3-202ENST00000537466 WASLO00401 505 aaPredicted RBP24.8■■□□□ 1.56
GPN3-202ENST00000537466 SPATA31A6Q5VVP1 1343 aa24.8■■□□□ 1.56
GPN3-202ENST00000537466 PNPLA6Q8IY17 1366 aa24.79■■□□□ 1.56
GPN3-202ENST00000537466 XPCQ01831 940 aaPredicted RBP24.79■■□□□ 1.56
GPN3-202ENST00000537466 PRR36Q9H6K5 1346 aa24.79■■□□□ 1.56
GPN3-202ENST00000537466 ITSN1Q15811 1721 aa24.78■■□□□ 1.56
GPN3-202ENST00000537466 PHF23Q9BUL5 403 aaPredicted RBP24.78■■□□□ 1.56
GPN3-202ENST00000537466 ILDR2Q71H61 639 aa24.77■■□□□ 1.56
GPN3-202ENST00000537466 PHF8Q9UPP1 1060 aa24.77■■□□□ 1.56
GPN3-202ENST00000537466 CENPJQ9HC77 1338 aaPredicted RBP24.76■■□□□ 1.55
GPN3-202ENST00000537466 EIF3AQ14152 1382 aaKnown RBP24.76■■□□□ 1.55
GPN3-202ENST00000537466 COL22A1Q8NFW1 1626 aaPredicted RBP24.76■■□□□ 1.55
GPN3-202ENST00000537466 RALGAPBQ86X10 1494 aa24.75■■□□□ 1.55
GPN3-202ENST00000537466 GPRASP1Q5JY77 1395 aa24.75■■□□□ 1.55
GPN3-202ENST00000537466 ATP7BP35670 1465 aa24.75■■□□□ 1.55
GPN3-202ENST00000537466 TOPAZ1Q8N9V7 1692 aa24.74■■□□□ 1.55
GPN3-202ENST00000537466 NUTM2BA6NNL0 878 aaPredicted RBP24.73■■□□□ 1.55
GPN3-202ENST00000537466 NUTM2EB1AL46 878 aaPredicted RBP24.73■■□□□ 1.55
GPN3-202ENST00000537466 NUTM2AQ8IVF1 878 aaPredicted RBP24.73■■□□□ 1.55
GPN3-202ENST00000537466 PMFBP1Q8TBY8 1022 aa24.73■■□□□ 1.55
GPN3-202ENST00000537466 RGS17Q9UGC6 210 aaPredicted RBP24.73■■□□□ 1.55
GPN3-202ENST00000537466 CDK19Q9BWU1 502 aa24.72■■□□□ 1.55
GPN3-202ENST00000537466 CLSPNQ9HAW4 1339 aa24.7■■□□□ 1.55
GPN3-202ENST00000537466 TRPM3Q9HCF6 1732 aaPredicted RBP24.7■■□□□ 1.54
GPN3-202ENST00000537466 KRT28Q7Z3Y7 464 aa24.7■■□□□ 1.54
GPN3-202ENST00000537466 NUDT16Q96DE0 195 aaKnown RBP24.69■■□□□ 1.54
GPN3-202ENST00000537466 MEX3CQ5U5Q3 659 aaKnown RBP24.67■■□□□ 1.54
GPN3-202ENST00000537466 CARD11Q9BXL7 1154 aa24.67■■□□□ 1.54
GPN3-202ENST00000537466 SPATA31A3Q5VYP0 1347 aa24.66■■□□□ 1.54
GPN3-202ENST00000537466 MARF1Q9Y4F3 1742 aaKnown RBP24.66■■□□□ 1.54
GPN3-202ENST00000537466 PSME1Q06323 249 aa24.65■■□□□ 1.54
GPN3-202ENST00000537466 TNS3Q68CZ2 1445 aa24.64■■□□□ 1.54
GPN3-202ENST00000537466 CCER1Q8TC90 406 aaPredicted RBP24.64■■□□□ 1.53
GPN3-202ENST00000537466 ALS2Q96Q42 1657 aa24.63■■□□□ 1.53
GPN3-202ENST00000537466 SRPK2P78362 688 aaKnown RBP24.63■■□□□ 1.53
GPN3-202ENST00000537466 CABP2Q9NPB3 220 aa24.63■■□□□ 1.53
GPN3-202ENST00000537466 SBNO1A3KN83 1393 aa24.62■■□□□ 1.53
GPN3-202ENST00000537466 ABCA3Q99758 1704 aa24.62■■□□□ 1.53
GPN3-202ENST00000537466 POTEAQ6S8J7 498 aa24.61■■□□□ 1.53
GPN3-202ENST00000537466 NGDNQ8NEJ9 315 aaKnown RBP24.6■■□□□ 1.53
GPN3-202ENST00000537466 CCDC61Q9Y6R9 512 aa24.6■■□□□ 1.53
GPN3-202ENST00000537466 ADAMTS2O95450 1211 aa24.59■■□□□ 1.53
GPN3-202ENST00000537466 TIMELESSQ9UNS1 1208 aa24.58■■□□□ 1.53
GPN3-202ENST00000537466 EVC2Q86UK5 1308 aa24.58■■□□□ 1.53
GPN3-202ENST00000537466 PPIP5K1Q6PFW1 1433 aa24.58■■□□□ 1.53
GPN3-202ENST00000537466 C8orf37Q96NL8 207 aa24.58■■□□□ 1.52
GPN3-202ENST00000537466 POLR3AO14802 1390 aaPredicted RBP24.57■■□□□ 1.52
GPN3-202ENST00000537466 SBNO2Q9Y2G9 1366 aa24.56■■□□□ 1.52
GPN3-202ENST00000537466 PLEKHG3A1L390 1219 aa24.56■■□□□ 1.52
GPN3-202ENST00000537466 LMOD2Q6P5Q4 547 aa24.56■■□□□ 1.52
GPN3-202ENST00000537466 ACEP12821 1306 aa24.55■■□□□ 1.52
GPN3-202ENST00000537466 AFF2P51816 1311 aa24.55■■□□□ 1.52
GPN3-202ENST00000537466 CRYBG1Q9Y4K1 1723 aa24.55■■□□□ 1.52
GPN3-202ENST00000537466 ARHGEF10O15013 1369 aa24.54■■□□□ 1.52
GPN3-202ENST00000537466 PLEKHG5O94827 1062 aa24.52■■□□□ 1.52
GPN3-202ENST00000537466 CABLES1Q8TDN4 633 aa24.52■■□□□ 1.52
GPN3-202ENST00000537466 ZNF772Q68DY9 489 aaPredicted RBP24.51■■□□□ 1.51
GPN3-202ENST00000537466 AKAP12Q02952 1782 aa24.51■■□□□ 1.51
GPN3-202ENST00000537466 PAK3O75914 559 aaPredicted RBP24.51■■□□□ 1.51
GPN3-202ENST00000537466 NGLY1Q96IV0 654 aa24.51■■□□□ 1.51
GPN3-202ENST00000537466 CABP1Q9NZU7 370 aa24.5■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms