RNA–Protein interactions for RNA: ENST00000536702.1

CUL3-213, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 404 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-213ENST00000536702 SOS2Q07890 1332 aaPredicted RBP22.94■■□□□ 1.26
CUL3-213ENST00000536702 CDC42BPGQ6DT37 1551 aa22.93■■□□□ 1.26
CUL3-213ENST00000536702 CCDC144AA2RUR9 1427 aa22.93■■□□□ 1.26
CUL3-213ENST00000536702 ADGRF5Q8IZF2 1346 aa22.93■■□□□ 1.26
CUL3-213ENST00000536702 QTRT2Q9H974 415 aaKnown RBP22.91■■□□□ 1.26
CUL3-213ENST00000536702 RGL3Q3MIN7 710 aa22.9■■□□□ 1.26
CUL3-213ENST00000536702 NGLY1Q96IV0 654 aa22.9■■□□□ 1.26
CUL3-213ENST00000536702 SPATA31E1Q6ZUB1 1445 aa22.9■■□□□ 1.26
CUL3-213ENST00000536702 IFT172Q9UG01 1749 aa22.89■■□□□ 1.26
CUL3-213ENST00000536702 RBM6P78332 1123 aaKnown RBP22.89■■□□□ 1.25
CUL3-213ENST00000536702 CNKSR2Q8WXI2 1034 aa22.89■■□□□ 1.25
CUL3-213ENST00000536702 STK26Q9P289 416 aa22.88■■□□□ 1.25
CUL3-213ENST00000536702 COL22A1Q8NFW1 1626 aaPredicted RBP22.87■■□□□ 1.25
CUL3-213ENST00000536702 TECPR2O15040 1411 aa22.86■■□□□ 1.25
CUL3-213ENST00000536702 ESCO1Q5FWF5 840 aa22.86■■□□□ 1.25
CUL3-213ENST00000536702 MPHOSPH9Q99550 1183 aa22.85■■□□□ 1.25
CUL3-213ENST00000536702 LRPPRCP42704 1394 aaKnown RBP22.85■■□□□ 1.25
CUL3-213ENST00000536702 ANKRD30BQ9BXX2 1392 aa22.85■■□□□ 1.25
CUL3-213ENST00000536702 PXDNQ92626 1479 aa22.85■■□□□ 1.25
CUL3-213ENST00000536702 NPHP3Q7Z494 1330 aa22.84■■□□□ 1.25
CUL3-213ENST00000536702 WAPLQ7Z5K2 1190 aa22.84■■□□□ 1.25
CUL3-213ENST00000536702 KNDC1Q76NI1 1749 aa22.84■■□□□ 1.25
CUL3-213ENST00000536702 PLEKHH1Q9ULM0 1364 aa22.84■■□□□ 1.25
CUL3-213ENST00000536702 MYOM2P54296 1465 aa22.84■■□□□ 1.25
CUL3-213ENST00000536702 PIK3C2GO75747 1445 aa22.83■■□□□ 1.25
CUL3-213ENST00000536702 NUTM2FA1L443 756 aa22.83■■□□□ 1.25
CUL3-213ENST00000536702 XPCQ01831 940 aaPredicted RBP22.83■■□□□ 1.25
CUL3-213ENST00000536702 USP21Q9UK80 565 aa22.83■■□□□ 1.25
CUL3-213ENST00000536702 TMEM132EQ6IEE7 984 aa22.82■■□□□ 1.24
CUL3-213ENST00000536702 ABCC11Q96J66 1382 aa22.8■■□□□ 1.24
CUL3-213ENST00000536702 FOXO3O43524 673 aa22.8■■□□□ 1.24
CUL3-213ENST00000536702 ATRNO75882 1429 aa22.79■■□□□ 1.24
CUL3-213ENST00000536702 FNBP4Q8N3X1 1017 aaPredicted RBP22.78■■□□□ 1.24
CUL3-213ENST00000536702 YTHDC2Q9H6S0 1430 aaKnown RBP22.78■■□□□ 1.24
CUL3-213ENST00000536702 FMN2Q9NZ56 1722 aa22.78■■□□□ 1.24
CUL3-213ENST00000536702 TRPC5Q9UL62 973 aaPredicted RBP22.78■■□□□ 1.24
CUL3-213ENST00000536702 NCBP3Q53F19 620 aaKnown RBP22.75■■□□□ 1.23
CUL3-213ENST00000536702 ATAD2Q6PL18 1390 aa22.75■■□□□ 1.23
CUL3-213ENST00000536702 MARF1Q9Y4F3 1742 aaKnown RBP22.74■■□□□ 1.23
CUL3-213ENST00000536702 EP400Q96L91 3159 aa22.74■■□□□ 1.23
CUL3-213ENST00000536702 KIF1AQ12756 1690 aa22.73■■□□□ 1.23
CUL3-213ENST00000536702 BCL9LQ86UU0 1499 aa22.73■■□□□ 1.23
CUL3-213ENST00000536702 NRXN1Q9ULB1 1477 aa22.71■■□□□ 1.23
CUL3-213ENST00000536702 SRCAPQ6ZRS2 3230 aa22.69■■□□□ 1.22
CUL3-213ENST00000536702 SPATA31A3Q5VYP0 1347 aa22.68■■□□□ 1.22
CUL3-213ENST00000536702 CFAP70Q5T0N1 1121 aa22.68■■□□□ 1.22
CUL3-213ENST00000536702 C14orf93Q9H972 538 aaKnown RBP22.68■■□□□ 1.22
CUL3-213ENST00000536702 RGPD8O14715 1765 aaPredicted RBP22.66■■□□□ 1.22
CUL3-213ENST00000536702 SAFB2Q14151 953 aaKnown RBP eCLIP22.66■■□□□ 1.22
CUL3-213ENST00000536702 USP32Q8NFA0 1604 aa22.66■■□□□ 1.22
CUL3-213ENST00000536702 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.65■■□□□ 1.22
CUL3-213ENST00000536702 DHX57Q6P158 1386 aaKnown RBP22.65■■□□□ 1.22
CUL3-213ENST00000536702 KRT28Q7Z3Y7 464 aa22.65■■□□□ 1.22
CUL3-213ENST00000536702 SIRT1Q96EB6 747 aa22.65■■□□□ 1.22
CUL3-213ENST00000536702 TNS3Q68CZ2 1445 aa22.65■■□□□ 1.22
CUL3-213ENST00000536702 PRAM1Q96QH2 718 aa22.64■■□□□ 1.21
CUL3-213ENST00000536702 PHF8Q9UPP1 1060 aa22.64■■□□□ 1.21
CUL3-213ENST00000536702 RAB3GAP2Q9H2M9 1393 aa22.63■■□□□ 1.21
CUL3-213ENST00000536702 SLIT2O94813 1529 aa22.63■■□□□ 1.21
CUL3-213ENST00000536702 GJD4Q96KN9 370 aaPredicted RBP22.63■■□□□ 1.21
CUL3-213ENST00000536702 PLEKHG5O94827 1062 aa22.62■■□□□ 1.21
CUL3-213ENST00000536702 GLI3P10071 1580 aa22.62■■□□□ 1.21
CUL3-213ENST00000536702 RALGAPBQ86X10 1494 aa22.61■■□□□ 1.21
CUL3-213ENST00000536702 DLC1Q96QB1 1528 aa22.61■■□□□ 1.21
CUL3-213ENST00000536702 ACIN1Q9UKV3 1341 aaKnown RBP22.6■■□□□ 1.21
CUL3-213ENST00000536702 UNC5CLQ8IV45 518 aa22.6■■□□□ 1.21
CUL3-213ENST00000536702 HAP1P54257 671 aaPredicted RBP22.59■■□□□ 1.21
CUL3-213ENST00000536702 ABCA3Q99758 1704 aa22.59■■□□□ 1.21
CUL3-213ENST00000536702 ADGRB1O14514 1584 aa22.59■■□□□ 1.21
CUL3-213ENST00000536702 CABLES1Q8TDN4 633 aa22.58■■□□□ 1.21
CUL3-213ENST00000536702 ADGRB2O60241 1585 aa22.58■■□□□ 1.2
CUL3-213ENST00000536702 PSME1Q06323 249 aa22.57■■□□□ 1.2
CUL3-213ENST00000536702 POGKQ9P215 609 aa22.57■■□□□ 1.2
CUL3-213ENST00000536702 PLCH1Q4KWH8 1693 aa22.56■■□□□ 1.2
CUL3-213ENST00000536702 SBNO1A3KN83 1393 aa22.56■■□□□ 1.2
CUL3-213ENST00000536702 LMOD2Q6P5Q4 547 aa22.56■■□□□ 1.2
CUL3-213ENST00000536702 ANKARQ7Z5J8 1434 aa22.56■■□□□ 1.2
CUL3-213ENST00000536702 HOXD11P31277 338 aaPredicted RBP22.55■■□□□ 1.2
CUL3-213ENST00000536702 PMFBP1Q8TBY8 1022 aa22.55■■□□□ 1.2
CUL3-213ENST00000536702 RNF216Q9NWF9 866 aaPredicted RBP22.55■■□□□ 1.2
CUL3-213ENST00000536702 ARHGEF10O15013 1369 aa22.53■■□□□ 1.2
CUL3-213ENST00000536702 KCNA4P22459 653 aa22.53■■□□□ 1.2
CUL3-213ENST00000536702 HIRIP3Q9BW71 556 aaPredicted RBP22.53■■□□□ 1.2
CUL3-213ENST00000536702 TRAK1Q9UPV9 953 aa22.53■■□□□ 1.2
CUL3-213ENST00000536702 BRWD3Q6RI45 1802 aa22.52■■□□□ 1.2
CUL3-213ENST00000536702 KDM2AQ9Y2K7 1162 aa22.51■■□□□ 1.19
CUL3-213ENST00000536702 MINK1Q8N4C8 1332 aaPredicted RBP22.51■■□□□ 1.19
CUL3-213ENST00000536702 TRPM3Q9HCF6 1732 aaPredicted RBP22.51■■□□□ 1.19
CUL3-213ENST00000536702 NWD2Q9ULI1 1742 aa22.51■■□□□ 1.19
CUL3-213ENST00000536702 VPS72Q15906 364 aa22.49■■□□□ 1.19
CUL3-213ENST00000536702 CCDC125Q86Z20 511 aa22.49■■□□□ 1.19
CUL3-213ENST00000536702 ZRANB1Q9UGI0 708 aa22.49■■□□□ 1.19
CUL3-213ENST00000536702 CCDC9Q9Y3X0 531 aaKnown RBP22.49■■□□□ 1.19
CUL3-213ENST00000536702 PRR36Q9H6K5 1346 aa22.49■■□□□ 1.19
CUL3-213ENST00000536702 TULP4Q9NRJ4 1543 aa22.48■■□□□ 1.19
CUL3-213ENST00000536702 DCAF11Q8TEB1 546 aa22.48■■□□□ 1.19
CUL3-213ENST00000536702 BLMP54132 1417 aaPredicted RBP22.48■■□□□ 1.19
CUL3-213ENST00000536702 SEPT12Q8IYM1 358 aa22.47■■□□□ 1.19
CUL3-213ENST00000536702 EIF3AQ14152 1382 aaKnown RBP22.46■■□□□ 1.19
CUL3-213ENST00000536702 ALS2Q96Q42 1657 aa22.46■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms