RNA–Protein interactions for RNA: ENST00000536661.1

UBC-204, Transcript of ubiquitin C, humanhuman

TSL 2

Gene UBC, Length 624 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBC-204ENST00000536661 FMN2Q9NZ56 1722 aa21.95■■□□□ 1.1
UBC-204ENST00000536661 CFAP70Q5T0N1 1121 aa21.95■■□□□ 1.1
UBC-204ENST00000536661 DDX17Q92841 729 aaKnown RBP21.95■■□□□ 1.1
UBC-204ENST00000536661 SPATA31A6Q5VVP1 1343 aa21.95■■□□□ 1.1
UBC-204ENST00000536661 WAPLQ7Z5K2 1190 aa21.94■■□□□ 1.1
UBC-204ENST00000536661 ADGRB1O14514 1584 aa21.92■■□□□ 1.1
UBC-204ENST00000536661 ORAI2Q96SN7 254 aa21.92■■□□□ 1.1
UBC-204ENST00000536661 DHX57Q6P158 1386 aaKnown RBP21.9■■□□□ 1.1
UBC-204ENST00000536661 RGPD8O14715 1765 aaPredicted RBP21.89■■□□□ 1.1
UBC-204ENST00000536661 DLC1Q96QB1 1528 aa21.89■■□□□ 1.09
UBC-204ENST00000536661 DCAF11Q8TEB1 546 aa21.88■■□□□ 1.09
UBC-204ENST00000536661 PNPLA6Q8IY17 1366 aa21.87■■□□□ 1.09
UBC-204ENST00000536661 LRRC59Q96AG4 307 aaKnown RBP21.87■■□□□ 1.09
UBC-204ENST00000536661 KDM2AQ9Y2K7 1162 aa21.87■■□□□ 1.09
UBC-204ENST00000536661 SIRT1Q96EB6 747 aa21.86■■□□□ 1.09
UBC-204ENST00000536661 SOS2Q07890 1332 aaPredicted RBP21.85■■□□□ 1.09
UBC-204ENST00000536661 KIF1AQ12756 1690 aa21.85■■□□□ 1.09
UBC-204ENST00000536661 NUTM2BA6NNL0 878 aaPredicted RBP21.84■■□□□ 1.09
UBC-204ENST00000536661 NUTM2EB1AL46 878 aaPredicted RBP21.84■■□□□ 1.09
UBC-204ENST00000536661 MEX3CQ5U5Q3 659 aaKnown RBP21.84■■□□□ 1.09
UBC-204ENST00000536661 NUTM2AQ8IVF1 878 aaPredicted RBP21.84■■□□□ 1.09
UBC-204ENST00000536661 ADGRB2O60241 1585 aa21.83■■□□□ 1.09
UBC-204ENST00000536661 NUTM2FA1L443 756 aa21.83■■□□□ 1.09
UBC-204ENST00000536661 ESCO1Q5FWF5 840 aa21.83■■□□□ 1.09
UBC-204ENST00000536661 COL22A1Q8NFW1 1626 aaPredicted RBP21.83■■□□□ 1.08
UBC-204ENST00000536661 ARHGEF28Q8N1W1 1705 aaKnown RBP21.83■■□□□ 1.08
UBC-204ENST00000536661 PXDNQ92626 1479 aa21.83■■□□□ 1.08
UBC-204ENST00000536661 STAC3Q96MF2 364 aa21.82■■□□□ 1.08
UBC-204ENST00000536661 PRAM1Q96QH2 718 aa21.82■■□□□ 1.08
UBC-204ENST00000536661 KIAA1210Q9ULL0 1709 aa21.81■■□□□ 1.08
UBC-204ENST00000536661 USP32Q8NFA0 1604 aa21.8■■□□□ 1.08
UBC-204ENST00000536661 SAFB2Q14151 953 aaKnown RBP eCLIP21.8■■□□□ 1.08
UBC-204ENST00000536661 NPHP3Q7Z494 1330 aa21.8■■□□□ 1.08
UBC-204ENST00000536661 ZNF772Q68DY9 489 aaPredicted RBP21.78■■□□□ 1.08
UBC-204ENST00000536661 TRAK1Q9UPV9 953 aa21.78■■□□□ 1.08
UBC-204ENST00000536661 FOXO3O43524 673 aa21.76■■□□□ 1.07
UBC-204ENST00000536661 POGKQ9P215 609 aa21.76■■□□□ 1.07
UBC-204ENST00000536661 MARF1Q9Y4F3 1742 aaKnown RBP21.75■■□□□ 1.07
UBC-204ENST00000536661 XPCQ01831 940 aaPredicted RBP21.75■■□□□ 1.07
UBC-204ENST00000536661 AFF2P51816 1311 aa21.75■■□□□ 1.07
UBC-204ENST00000536661 ANKARQ7Z5J8 1434 aa21.72■■□□□ 1.07
UBC-204ENST00000536661 C8orf37Q96NL8 207 aa21.71■■□□□ 1.07
UBC-204ENST00000536661 MINK1Q8N4C8 1332 aaPredicted RBP21.7■■□□□ 1.06
UBC-204ENST00000536661 TULP4Q9NRJ4 1543 aa21.7■■□□□ 1.06
UBC-204ENST00000536661 ADAMTS2O95450 1211 aa21.69■■□□□ 1.06
UBC-204ENST00000536661 HIRIP3Q9BW71 556 aaPredicted RBP21.69■■□□□ 1.06
UBC-204ENST00000536661 PHF8Q9UPP1 1060 aa21.69■■□□□ 1.06
UBC-204ENST00000536661 RXRBP28702 533 aa21.68■■□□□ 1.06
UBC-204ENST00000536661 ITSN1Q15811 1721 aa21.68■■□□□ 1.06
UBC-204ENST00000536661 ABCA3Q99758 1704 aa21.66■■□□□ 1.06
UBC-204ENST00000536661 TRPM3Q9HCF6 1732 aaPredicted RBP21.66■■□□□ 1.06
UBC-204ENST00000536661 EIF3AQ14152 1382 aaKnown RBP21.65■■□□□ 1.06
UBC-204ENST00000536661 SPATA31A3Q5VYP0 1347 aa21.65■■□□□ 1.06
UBC-204ENST00000536661 PRR36Q9H6K5 1346 aa21.65■■□□□ 1.06
UBC-204ENST00000536661 KRT28Q7Z3Y7 464 aa21.65■■□□□ 1.06
UBC-204ENST00000536661 SIN3AQ96ST3 1273 aa21.65■■□□□ 1.06
UBC-204ENST00000536661 TNS3Q68CZ2 1445 aa21.64■■□□□ 1.06
UBC-204ENST00000536661 QTRT2Q9H974 415 aaKnown RBP21.64■■□□□ 1.05
UBC-204ENST00000536661 TRPM1Q7Z4N2 1603 aa21.64■■□□□ 1.05
UBC-204ENST00000536661 CDK12Q9NYV4 1490 aaPredicted RBP21.64■■□□□ 1.05
UBC-204ENST00000536661 WASLO00401 505 aaPredicted RBP21.63■■□□□ 1.05
UBC-204ENST00000536661 NBPF1Q3BBV0 1214 aa21.63■■□□□ 1.05
UBC-204ENST00000536661 NGLY1Q96IV0 654 aa21.63■■□□□ 1.05
UBC-204ENST00000536661 PMFBP1Q8TBY8 1022 aa21.62■■□□□ 1.05
UBC-204ENST00000536661 L3MBTL2Q969R5 705 aa21.62■■□□□ 1.05
UBC-204ENST00000536661 ATP7BP35670 1465 aa21.62■■□□□ 1.05
UBC-204ENST00000536661 TOPAZ1Q8N9V7 1692 aa21.62■■□□□ 1.05
UBC-204ENST00000536661 ALS2Q96Q42 1657 aa21.61■■□□□ 1.05
UBC-204ENST00000536661 QRICH2Q9H0J4 1663 aa21.61■■□□□ 1.05
UBC-204ENST00000536661 FNBP4Q8N3X1 1017 aaPredicted RBP21.6■■□□□ 1.05
UBC-204ENST00000536661 SBNO1A3KN83 1393 aa21.6■■□□□ 1.05
UBC-204ENST00000536661 UPF1Q92900 1129 aaKnown RBP eCLIP21.59■■□□□ 1.05
UBC-204ENST00000536661 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.58■■□□□ 1.05
UBC-204ENST00000536661 RGS12O14924 1447 aa21.58■■□□□ 1.05
UBC-204ENST00000536661 RBM6P78332 1123 aaKnown RBP21.58■■□□□ 1.05
UBC-204ENST00000536661 PSME1Q06323 249 aa21.58■■□□□ 1.05
UBC-204ENST00000536661 NEUROD1Q13562 356 aa21.58■■□□□ 1.05
UBC-204ENST00000536661 USP21Q9UK80 565 aa21.57■■□□□ 1.04
UBC-204ENST00000536661 CRYBG1Q9Y4K1 1723 aa21.55■■□□□ 1.04
UBC-204ENST00000536661 PLCH1Q4KWH8 1693 aa21.55■■□□□ 1.04
UBC-204ENST00000536661 ATRNO75882 1429 aa21.55■■□□□ 1.04
UBC-204ENST00000536661 BCL9LQ86UU0 1499 aa21.54■■□□□ 1.04
UBC-204ENST00000536661 ARHGEF10O15013 1369 aa21.54■■□□□ 1.04
UBC-204ENST00000536661 TRIM26Q12899 539 aaPredicted RBP21.54■■□□□ 1.04
UBC-204ENST00000536661 GPRASP1Q5JY77 1395 aa21.52■■□□□ 1.04
UBC-204ENST00000536661 LMOD2Q6P5Q4 547 aa21.52■■□□□ 1.04
UBC-204ENST00000536661 CABLES1Q8TDN4 633 aa21.52■■□□□ 1.04
UBC-204ENST00000536661 NUDT16Q96DE0 195 aaKnown RBP21.52■■□□□ 1.04
UBC-204ENST00000536661 CDK19Q9BWU1 502 aa21.52■■□□□ 1.04
UBC-204ENST00000536661 TRPC5Q9UL62 973 aaPredicted RBP21.52■■□□□ 1.04
UBC-204ENST00000536661 SLIT2O94813 1529 aa21.51■■□□□ 1.03
UBC-204ENST00000536661 PLEKHG5O94827 1062 aa21.51■■□□□ 1.03
UBC-204ENST00000536661 NWD2Q9ULI1 1742 aa21.51■■□□□ 1.03
UBC-204ENST00000536661 CENPJQ9HC77 1338 aaPredicted RBP21.51■■□□□ 1.03
UBC-204ENST00000536661 NGDNQ8NEJ9 315 aaKnown RBP21.5■■□□□ 1.03
UBC-204ENST00000536661 HAP1P54257 671 aaPredicted RBP21.49■■□□□ 1.03
UBC-204ENST00000536661 ROCK2O75116 1388 aaKnown RBP21.48■■□□□ 1.03
UBC-204ENST00000536661 PHRF1Q9P1Y6 1649 aaKnown RBP21.47■■□□□ 1.03
UBC-204ENST00000536661 NRAPQ86VF7 1730 aa21.46■■□□□ 1.03
UBC-204ENST00000536661 GLI3P10071 1580 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms