RNA–Protein interactions for RNA: ENST00000536398.5

UBE3B-206, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-206ENST00000536398 SIRT1Q96EB6 747 aa20.76■□□□□ 0.91
UBE3B-206ENST00000536398 PHF23Q9BUL5 403 aaPredicted RBP20.76■□□□□ 0.91
UBE3B-206ENST00000536398 NUTM2FA1L443 756 aa20.75■□□□□ 0.91
UBE3B-206ENST00000536398 PRAM1Q96QH2 718 aa20.75■□□□□ 0.91
UBE3B-206ENST00000536398 ADGRB1O14514 1584 aa20.74■□□□□ 0.91
UBE3B-206ENST00000536398 KNDC1Q76NI1 1749 aa20.74■□□□□ 0.91
UBE3B-206ENST00000536398 STAC3Q96MF2 364 aa20.74■□□□□ 0.91
UBE3B-206ENST00000536398 TRAK1Q9UPV9 953 aa20.74■□□□□ 0.91
UBE3B-206ENST00000536398 LAMC1P11047 1609 aa20.74■□□□□ 0.91
UBE3B-206ENST00000536398 RGS17Q9UGC6 210 aaPredicted RBP20.73■□□□□ 0.91
UBE3B-206ENST00000536398 NEUROD1Q13562 356 aa20.71■□□□□ 0.91
UBE3B-206ENST00000536398 ESCO1Q5FWF5 840 aa20.71■□□□□ 0.91
UBE3B-206ENST00000536398 POGKQ9P215 609 aa20.7■□□□□ 0.9
UBE3B-206ENST00000536398 CDC42BPGQ6DT37 1551 aa20.7■□□□□ 0.9
UBE3B-206ENST00000536398 NHSL1Q5SYE7 1610 aa20.69■□□□□ 0.9
UBE3B-206ENST00000536398 L3MBTL2Q969R5 705 aa20.68■□□□□ 0.9
UBE3B-206ENST00000536398 NBPF1Q3BBV0 1214 aa20.67■□□□□ 0.9
UBE3B-206ENST00000536398 LRRC59Q96AG4 307 aaKnown RBP20.67■□□□□ 0.9
UBE3B-206ENST00000536398 LRP6O75581 1613 aa20.67■□□□□ 0.9
UBE3B-206ENST00000536398 NUTM2BA6NNL0 878 aaPredicted RBP20.66■□□□□ 0.9
UBE3B-206ENST00000536398 NUTM2EB1AL46 878 aaPredicted RBP20.66■□□□□ 0.9
UBE3B-206ENST00000536398 NUTM2AQ8IVF1 878 aaPredicted RBP20.66■□□□□ 0.9
UBE3B-206ENST00000536398 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
UBE3B-206ENST00000536398 DLC1Q96QB1 1528 aa20.66■□□□□ 0.9
UBE3B-206ENST00000536398 SOS2Q07890 1332 aaPredicted RBP20.65■□□□□ 0.9
UBE3B-206ENST00000536398 SPATA31A6Q5VVP1 1343 aa20.65■□□□□ 0.9
UBE3B-206ENST00000536398 XPCQ01831 940 aaPredicted RBP20.65■□□□□ 0.9
UBE3B-206ENST00000536398 MINK1Q8N4C8 1332 aaPredicted RBP20.64■□□□□ 0.89
UBE3B-206ENST00000536398 FOXO3O43524 673 aa20.64■□□□□ 0.89
UBE3B-206ENST00000536398 PNPLA6Q8IY17 1366 aa20.62■□□□□ 0.89
UBE3B-206ENST00000536398 FMN2Q9NZ56 1722 aa20.62■□□□□ 0.89
UBE3B-206ENST00000536398 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
UBE3B-206ENST00000536398 POTEAQ6S8J7 498 aa20.62■□□□□ 0.89
UBE3B-206ENST00000536398 SOCS7O14512 581 aa20.6■□□□□ 0.89
UBE3B-206ENST00000536398 MEX3CQ5U5Q3 659 aaKnown RBP20.6■□□□□ 0.89
UBE3B-206ENST00000536398 NPHP3Q7Z494 1330 aa20.59■□□□□ 0.89
UBE3B-206ENST00000536398 PHF8Q9UPP1 1060 aa20.58■□□□□ 0.89
UBE3B-206ENST00000536398 PXDNQ92626 1479 aa20.56■□□□□ 0.88
UBE3B-206ENST00000536398 RGPD8O14715 1765 aaPredicted RBP20.56■□□□□ 0.88
UBE3B-206ENST00000536398 PRR36Q9H6K5 1346 aa20.55■□□□□ 0.88
UBE3B-206ENST00000536398 WASLO00401 505 aaPredicted RBP20.55■□□□□ 0.88
UBE3B-206ENST00000536398 PMFBP1Q8TBY8 1022 aa20.55■□□□□ 0.88
UBE3B-206ENST00000536398 KIAA1210Q9ULL0 1709 aa20.55■□□□□ 0.88
UBE3B-206ENST00000536398 ARHGEF28Q8N1W1 1705 aaKnown RBP20.54■□□□□ 0.88
UBE3B-206ENST00000536398 KRT28Q7Z3Y7 464 aa20.54■□□□□ 0.88
UBE3B-206ENST00000536398 ADGRB2O60241 1585 aa20.54■□□□□ 0.88
UBE3B-206ENST00000536398 ADAMTS2O95450 1211 aa20.53■□□□□ 0.88
UBE3B-206ENST00000536398 NBPF8Q3BBV2 869 aa20.53■□□□□ 0.88
UBE3B-206ENST00000536398 USP32Q8NFA0 1604 aa20.53■□□□□ 0.88
UBE3B-206ENST00000536398 C8orf37Q96NL8 207 aa20.51■□□□□ 0.87
UBE3B-206ENST00000536398 ANKARQ7Z5J8 1434 aa20.51■□□□□ 0.87
UBE3B-206ENST00000536398 CDK19Q9BWU1 502 aa20.5■□□□□ 0.87
UBE3B-206ENST00000536398 AFF2P51816 1311 aa20.49■□□□□ 0.87
UBE3B-206ENST00000536398 SPATA31A3Q5VYP0 1347 aa20.49■□□□□ 0.87
UBE3B-206ENST00000536398 KIF1AQ12756 1690 aa20.48■□□□□ 0.87
UBE3B-206ENST00000536398 PSME1Q06323 249 aa20.48■□□□□ 0.87
UBE3B-206ENST00000536398 NUDT16Q96DE0 195 aaKnown RBP20.48■□□□□ 0.87
UBE3B-206ENST00000536398 TULP4Q9NRJ4 1543 aa20.47■□□□□ 0.87
UBE3B-206ENST00000536398 ZNF772Q68DY9 489 aaPredicted RBP20.46■□□□□ 0.87
UBE3B-206ENST00000536398 PCGF6Q9BYE7 350 aa20.46■□□□□ 0.87
UBE3B-206ENST00000536398 CENPJQ9HC77 1338 aaPredicted RBP20.46■□□□□ 0.87
UBE3B-206ENST00000536398 PLEKHG5O94827 1062 aa20.45■□□□□ 0.86
UBE3B-206ENST00000536398 NGLY1Q96IV0 654 aa20.45■□□□□ 0.86
UBE3B-206ENST00000536398 TRPM1Q7Z4N2 1603 aa20.45■□□□□ 0.86
UBE3B-206ENST00000536398 COL22A1Q8NFW1 1626 aaPredicted RBP20.45■□□□□ 0.86
UBE3B-206ENST00000536398 ROCK2O75116 1388 aaKnown RBP20.45■□□□□ 0.86
UBE3B-206ENST00000536398 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
UBE3B-206ENST00000536398 TONSLQ96HA7 1378 aa20.45■□□□□ 0.86
UBE3B-206ENST00000536398 LMOD2Q6P5Q4 547 aa20.43■□□□□ 0.86
UBE3B-206ENST00000536398 CABLES1Q8TDN4 633 aa20.43■□□□□ 0.86
UBE3B-206ENST00000536398 ATP7BP35670 1465 aa20.43■□□□□ 0.86
UBE3B-206ENST00000536398 NGDNQ8NEJ9 315 aaKnown RBP20.42■□□□□ 0.86
UBE3B-206ENST00000536398 SBNO1A3KN83 1393 aa20.42■□□□□ 0.86
UBE3B-206ENST00000536398 CABP2Q9NPB3 220 aa20.41■□□□□ 0.86
UBE3B-206ENST00000536398 TNS3Q68CZ2 1445 aa20.41■□□□□ 0.86
UBE3B-206ENST00000536398 SRPK2P78362 688 aaKnown RBP20.39■□□□□ 0.85
UBE3B-206ENST00000536398 QTRT2Q9H974 415 aaKnown RBP20.39■□□□□ 0.85
UBE3B-206ENST00000536398 GPRASP1Q5JY77 1395 aa20.38■□□□□ 0.85
UBE3B-206ENST00000536398 CCDC61Q9Y6R9 512 aa20.38■□□□□ 0.85
UBE3B-206ENST00000536398 RXRBP28702 533 aa20.37■□□□□ 0.85
UBE3B-206ENST00000536398 FNBP4Q8N3X1 1017 aaPredicted RBP20.37■□□□□ 0.85
UBE3B-206ENST00000536398 USP21Q9UK80 565 aa20.37■□□□□ 0.85
UBE3B-206ENST00000536398 ACEP12821 1306 aa20.36■□□□□ 0.85
UBE3B-206ENST00000536398 PAK3O75914 559 aaPredicted RBP20.36■□□□□ 0.85
UBE3B-206ENST00000536398 CARD11Q9BXL7 1154 aa20.36■□□□□ 0.85
UBE3B-206ENST00000536398 QRICH2Q9H0J4 1663 aa20.35■□□□□ 0.85
UBE3B-206ENST00000536398 PLEKHG3A1L390 1219 aa20.35■□□□□ 0.85
UBE3B-206ENST00000536398 TRPM3Q9HCF6 1732 aaPredicted RBP20.35■□□□□ 0.85
UBE3B-206ENST00000536398 ARHGEF10O15013 1369 aa20.34■□□□□ 0.85
UBE3B-206ENST00000536398 HAP1P54257 671 aaPredicted RBP20.33■□□□□ 0.85
UBE3B-206ENST00000536398 POLR3AO14802 1390 aaPredicted RBP20.33■□□□□ 0.84
UBE3B-206ENST00000536398 BCL9LQ86UU0 1499 aa20.32■□□□□ 0.84
UBE3B-206ENST00000536398 RALGAPBQ86X10 1494 aa20.31■□□□□ 0.84
UBE3B-206ENST00000536398 EVC2Q86UK5 1308 aa20.31■□□□□ 0.84
UBE3B-206ENST00000536398 PPIP5K1Q6PFW1 1433 aa20.31■□□□□ 0.84
UBE3B-206ENST00000536398 RBM6P78332 1123 aaKnown RBP20.31■□□□□ 0.84
UBE3B-206ENST00000536398 CABP1Q9NZU7 370 aa20.31■□□□□ 0.84
UBE3B-206ENST00000536398 TOPAZ1Q8N9V7 1692 aa20.31■□□□□ 0.84
UBE3B-206ENST00000536398 ITSN1Q15811 1721 aa20.3■□□□□ 0.84
UBE3B-206ENST00000536398 NUTM2GQ5VZR2 741 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms