RNA–Protein interactions for RNA: ENST00000536313.2

MDM1-206, Transcript of Mdm1 nuclear protein, humanhuman

TSL 5

Gene MDM1, Length 883 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-206ENST00000536313 CUL7Q14999 1698 aa7.12□□□□□ -1.27
MDM1-206ENST00000536313 MAGI3Q5TCQ9 1506 aa7.11□□□□□ -1.27
MDM1-206ENST00000536313 SMARCA5O60264 1052 aaPredicted RBP7.11□□□□□ -1.27
MDM1-206ENST00000536313 HOXB3P14651 431 aaPredicted RBP7.11□□□□□ -1.27
MDM1-206ENST00000536313 KCNH8Q96L42 1107 aa7.11□□□□□ -1.27
MDM1-206ENST00000536313 KIF27Q86VH2 1401 aa7.1□□□□□ -1.27
MDM1-206ENST00000536313 CARMIL1Q5VZK9 1371 aa7.1□□□□□ -1.27
MDM1-206ENST00000536313 KIF21BO75037 1637 aa7.1□□□□□ -1.27
MDM1-206ENST00000536313 DOK7Q18PE1 504 aa7.1□□□□□ -1.27
MDM1-206ENST00000536313 PBXIP1Q96AQ6 731 aa7.1□□□□□ -1.27
MDM1-206ENST00000536313 PCF11O94913 1555 aaKnown RBP7.1□□□□□ -1.27
MDM1-206ENST00000536313 ZCCHC11Q5TAX3 1644 aaKnown RBP7.09□□□□□ -1.27
MDM1-206ENST00000536313 CSB-PGBD3P0DP91 1061 aa7.09□□□□□ -1.27
MDM1-206ENST00000536313 TICAM2Q86XR7 235 aa7.09□□□□□ -1.27
MDM1-206ENST00000536313 SREK1Q8WXA9 508 aaKnown RBP7.09□□□□□ -1.27
MDM1-206ENST00000536313 ZNF592Q92610 1267 aa7.09□□□□□ -1.27
MDM1-206ENST00000536313 C8orf37Q96NL8 207 aa7.09□□□□□ -1.27
MDM1-206ENST00000536313 KIAA1522Q9P206 1035 aaPredicted RBP7.09□□□□□ -1.27
MDM1-206ENST00000536313 IQGAP2Q13576 1575 aa7.08□□□□□ -1.28
MDM1-206ENST00000536313 KIF3CO14782 793 aa7.08□□□□□ -1.28
MDM1-206ENST00000536313 TBC1D12O60347 775 aa7.08□□□□□ -1.28
MDM1-206ENST00000536313 CLSTN1O94985 981 aa7.08□□□□□ -1.28
MDM1-206ENST00000536313 RAPGEF3O95398 923 aa7.08□□□□□ -1.28
MDM1-206ENST00000536313 DDX27Q96GQ7 796 aaKnown RBP7.08□□□□□ -1.28
MDM1-206ENST00000536313 CALR3Q96L12 384 aaKnown RBP7.08□□□□□ -1.28
MDM1-206ENST00000536313 ARAP3Q8WWN8 1544 aa7.07□□□□□ -1.28
MDM1-206ENST00000536313 MS4A1P11836 297 aa7.07□□□□□ -1.28
MDM1-206ENST00000536313 TTLL12Q14166 644 aaPredicted RBP7.07□□□□□ -1.28
MDM1-206ENST00000536313 ZNF710Q8N1W2 664 aa7.07□□□□□ -1.28
MDM1-206ENST00000536313 OXER1Q8TDS5 423 aa7.07□□□□□ -1.28
MDM1-206ENST00000536313 MRRFQ96E11 262 aaKnown RBP7.07□□□□□ -1.28
MDM1-206ENST00000536313 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.07□□□□□ -1.28
MDM1-206ENST00000536313 ADAMTSL3P82987 1691 aa7.06□□□□□ -1.28
MDM1-206ENST00000536313 C2orf72A6NCS6 295 aa7.06□□□□□ -1.28
MDM1-206ENST00000536313 RIMBP2O15034 1052 aa7.06□□□□□ -1.28
MDM1-206ENST00000536313 SKIV2LQ15477 1246 aaKnown RBP7.06□□□□□ -1.28
MDM1-206ENST00000536313 TSR1Q2NL82 804 aaKnown RBP7.06□□□□□ -1.28
MDM1-206ENST00000536313 GIGYF2Q6Y7W6 1299 aaKnown RBP7.06□□□□□ -1.28
MDM1-206ENST00000536313 MARVELD3Q96A59 401 aa7.06□□□□□ -1.28
MDM1-206ENST00000536313 HOXB1P14653 301 aaPredicted RBP7.05□□□□□ -1.28
MDM1-206ENST00000536313 ERCC3P19447 782 aa7.05□□□□□ -1.28
MDM1-206ENST00000536313 EMP3P54852 163 aa7.05□□□□□ -1.28
MDM1-206ENST00000536313 TMC2Q8TDI7 906 aa7.05□□□□□ -1.28
MDM1-206ENST00000536313 CRISPLD2Q9H0B8 497 aa7.05□□□□□ -1.28
MDM1-206ENST00000536313 UGGT2Q9NYU1 1516 aa7.05□□□□□ -1.28
MDM1-206ENST00000536313 ZC3H4Q9UPT8 1303 aaKnown RBP7.04□□□□□ -1.28
MDM1-206ENST00000536313 TXNDC2Q86VQ3 553 aa7.04□□□□□ -1.28
MDM1-206ENST00000536313 WWC1Q8IX03 1113 aa7.04□□□□□ -1.28
MDM1-206ENST00000536313 BANK1Q8NDB2 785 aa7.04□□□□□ -1.28
MDM1-206ENST00000536313 ZSWIM6Q9HCJ5 1215 aa7.04□□□□□ -1.28
MDM1-206ENST00000536313 KIAA0556O60303 1618 aa7.04□□□□□ -1.28
MDM1-206ENST00000536313 MADDQ8WXG6 1647 aa7.04□□□□□ -1.28
MDM1-206ENST00000536313 KDM4AO75164 1064 aa7.03□□□□□ -1.28
MDM1-206ENST00000536313 TCF3P15923 654 aa7.03□□□□□ -1.28
MDM1-206ENST00000536313 CDAN1Q8IWY9 1227 aa7.03□□□□□ -1.28
MDM1-206ENST00000536313 GLMNQ92990 594 aa7.03□□□□□ -1.28
MDM1-206ENST00000536313 BRPF3Q9ULD4 1205 aa7.03□□□□□ -1.28
MDM1-206ENST00000536313 GNEQ9Y223 722 aaKnown RBP7.03□□□□□ -1.28
MDM1-206ENST00000536313 SPDYE16A6NNV3 312 aaPredicted RBP7.02□□□□□ -1.29
MDM1-206ENST00000536313 UBXN4Q92575 508 aa7.02□□□□□ -1.29
MDM1-206ENST00000536313 CFAP43Q8NDM7 1665 aa7.02□□□□□ -1.29
MDM1-206ENST00000536313 ANKRD62A6NC57 917 aa7.01□□□□□ -1.29
MDM1-206ENST00000536313 VRTNQ9H8Y1 702 aa7.01□□□□□ -1.29
MDM1-206ENST00000536313 ABCA8O94911 1581 aa7□□□□□ -1.29
MDM1-206ENST00000536313 SPATA31D1Q6ZQQ2 1576 aa7□□□□□ -1.29
MDM1-206ENST00000536313 PHLDB1Q86UU1 1377 aa7□□□□□ -1.29
MDM1-206ENST00000536313 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7□□□□□ -1.29
MDM1-206ENST00000536313 FAM205CA6NFA0 338 aa7□□□□□ -1.29
MDM1-206ENST00000536313 GNPATO15228 680 aa7□□□□□ -1.29
MDM1-206ENST00000536313 SRPK2P78362 688 aaKnown RBP7□□□□□ -1.29
MDM1-206ENST00000536313 GPR153Q6NV75 609 aa7□□□□□ -1.29
MDM1-206ENST00000536313 HS3ST6Q96QI5 342 aa7□□□□□ -1.29
MDM1-206ENST00000536313 BCORL1Q5H9F3 1711 aa7□□□□□ -1.29
MDM1-206ENST00000536313 FRMPD1Q5SYB0 1578 aa6.99□□□□□ -1.29
MDM1-206ENST00000536313 NOL8Q76FK4 1167 aaKnown RBP6.99□□□□□ -1.29
MDM1-206ENST00000536313 SIRT1Q96EB6 747 aa6.99□□□□□ -1.29
MDM1-206ENST00000536313 HIRIP3Q9BW71 556 aaPredicted RBP6.99□□□□□ -1.29
MDM1-206ENST00000536313 GPHNQ9NQX3 736 aaPredicted RBP6.99□□□□□ -1.29
MDM1-206ENST00000536313 SNRKQ9NRH2 765 aa6.99□□□□□ -1.29
MDM1-206ENST00000536313 RAPGEF2Q9Y4G8 1499 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 POTEB3A0JP26 581 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 CARNS1A5YM72 827 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 SLC34A2O95436 690 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 ZC3H6P61129 1189 aaKnown RBP6.98□□□□□ -1.29
MDM1-206ENST00000536313 FOXK1P85037 733 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 PDIA6Q15084 440 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 POTEBQ6S5H4 581 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 PROCA1Q8NCQ7 364 aaPredicted RBP6.98□□□□□ -1.29
MDM1-206ENST00000536313 ATP10BO94823 1461 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 NEO1Q92859 1461 aa6.98□□□□□ -1.29
MDM1-206ENST00000536313 PLEKHD1A6NEE1 506 aa6.97□□□□□ -1.29
MDM1-206ENST00000536313 ZNF16P17020 682 aaPredicted RBP6.97□□□□□ -1.29
MDM1-206ENST00000536313 SF3A1Q15459 793 aaKnown RBP6.97□□□□□ -1.29
MDM1-206ENST00000536313 ARSIQ5FYB1 569 aa6.97□□□□□ -1.29
MDM1-206ENST00000536313 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.97□□□□□ -1.29
MDM1-206ENST00000536313 ERBB3P21860 1342 aa6.97□□□□□ -1.29
MDM1-206ENST00000536313 YEATS2Q9ULM3 1422 aa6.96□□□□□ -1.3
MDM1-206ENST00000536313 NUTM2FA1L443 756 aa6.96□□□□□ -1.3
MDM1-206ENST00000536313 POM121CA8CG34 1229 aa6.96□□□□□ -1.3
MDM1-206ENST00000536313 MLECQ14165 292 aa6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms