RNA–Protein interactions for RNA: ENST00000536295.1

RTN3P1-201, Transcript of reticulon 3 pseudogene 1, humanhuman

BASIC

Gene RTN3P1, Length 711 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3P1-201ENST00000536295 C14orf93Q9H972 538 aaKnown RBP20.99■□□□□ 0.95
RTN3P1-201ENST00000536295 MYOM2P54296 1465 aa20.99■□□□□ 0.95
RTN3P1-201ENST00000536295 ABCC11Q96J66 1382 aa20.98■□□□□ 0.95
RTN3P1-201ENST00000536295 PLEKHH1Q9ULM0 1364 aa20.98■□□□□ 0.95
RTN3P1-201ENST00000536295 YTHDC2Q9H6S0 1430 aaKnown RBP20.98■□□□□ 0.95
RTN3P1-201ENST00000536295 HRCP23327 699 aa20.98■□□□□ 0.95
RTN3P1-201ENST00000536295 NRXN1Q9ULB1 1477 aa20.97■□□□□ 0.95
RTN3P1-201ENST00000536295 CDC42BPGQ6DT37 1551 aa20.97■□□□□ 0.95
RTN3P1-201ENST00000536295 NUTM2FA1L443 756 aa20.96■□□□□ 0.95
RTN3P1-201ENST00000536295 KNDC1Q76NI1 1749 aa20.95■□□□□ 0.94
RTN3P1-201ENST00000536295 ESCO1Q5FWF5 840 aa20.95■□□□□ 0.94
RTN3P1-201ENST00000536295 KDM2AQ9Y2K7 1162 aa20.95■□□□□ 0.94
RTN3P1-201ENST00000536295 DHX57Q6P158 1386 aaKnown RBP20.94■□□□□ 0.94
RTN3P1-201ENST00000536295 PNPLA6Q8IY17 1366 aa20.94■□□□□ 0.94
RTN3P1-201ENST00000536295 DCAF11Q8TEB1 546 aa20.93■□□□□ 0.94
RTN3P1-201ENST00000536295 LAMC1P11047 1609 aa20.93■□□□□ 0.94
RTN3P1-201ENST00000536295 SOS2Q07890 1332 aaPredicted RBP20.91■□□□□ 0.94
RTN3P1-201ENST00000536295 SAFB2Q14151 953 aaKnown RBP eCLIP20.9■□□□□ 0.94
RTN3P1-201ENST00000536295 ZNF772Q68DY9 489 aaPredicted RBP20.9■□□□□ 0.94
RTN3P1-201ENST00000536295 PRAM1Q96QH2 718 aa20.89■□□□□ 0.93
RTN3P1-201ENST00000536295 XPCQ01831 940 aaPredicted RBP20.88■□□□□ 0.93
RTN3P1-201ENST00000536295 SIRT1Q96EB6 747 aa20.88■□□□□ 0.93
RTN3P1-201ENST00000536295 NPHP3Q7Z494 1330 aa20.87■□□□□ 0.93
RTN3P1-201ENST00000536295 FOXO3O43524 673 aa20.87■□□□□ 0.93
RTN3P1-201ENST00000536295 C8orf37Q96NL8 207 aa20.87■□□□□ 0.93
RTN3P1-201ENST00000536295 AFF2P51816 1311 aa20.86■□□□□ 0.93
RTN3P1-201ENST00000536295 ADAMTS2O95450 1211 aa20.86■□□□□ 0.93
RTN3P1-201ENST00000536295 POGKQ9P215 609 aa20.86■□□□□ 0.93
RTN3P1-201ENST00000536295 FMN2Q9NZ56 1722 aa20.85■□□□□ 0.93
RTN3P1-201ENST00000536295 TRAK1Q9UPV9 953 aa20.85■□□□□ 0.93
RTN3P1-201ENST00000536295 ADGRB1O14514 1584 aa20.84■□□□□ 0.93
RTN3P1-201ENST00000536295 PXDNQ92626 1479 aa20.82■□□□□ 0.92
RTN3P1-201ENST00000536295 DLC1Q96QB1 1528 aa20.82■□□□□ 0.92
RTN3P1-201ENST00000536295 STAC3Q96MF2 364 aa20.81■□□□□ 0.92
RTN3P1-201ENST00000536295 RXRBP28702 533 aa20.8■□□□□ 0.92
RTN3P1-201ENST00000536295 NGLY1Q96IV0 654 aa20.8■□□□□ 0.92
RTN3P1-201ENST00000536295 HIRIP3Q9BW71 556 aaPredicted RBP20.79■□□□□ 0.92
RTN3P1-201ENST00000536295 MINK1Q8N4C8 1332 aaPredicted RBP20.78■□□□□ 0.92
RTN3P1-201ENST00000536295 KIF1AQ12756 1690 aa20.77■□□□□ 0.92
RTN3P1-201ENST00000536295 PHF8Q9UPP1 1060 aa20.77■□□□□ 0.92
RTN3P1-201ENST00000536295 COL22A1Q8NFW1 1626 aaPredicted RBP20.77■□□□□ 0.92
RTN3P1-201ENST00000536295 RGPD8O14715 1765 aaPredicted RBP20.77■□□□□ 0.91
RTN3P1-201ENST00000536295 KRT28Q7Z3Y7 464 aa20.76■□□□□ 0.91
RTN3P1-201ENST00000536295 QTRT2Q9H974 415 aaKnown RBP20.76■□□□□ 0.91
RTN3P1-201ENST00000536295 ADGRB2O60241 1585 aa20.73■□□□□ 0.91
RTN3P1-201ENST00000536295 PMFBP1Q8TBY8 1022 aa20.73■□□□□ 0.91
RTN3P1-201ENST00000536295 SPATA31A3Q5VYP0 1347 aa20.73■□□□□ 0.91
RTN3P1-201ENST00000536295 USP21Q9UK80 565 aa20.72■□□□□ 0.91
RTN3P1-201ENST00000536295 ANKARQ7Z5J8 1434 aa20.71■□□□□ 0.91
RTN3P1-201ENST00000536295 PLEKHG5O94827 1062 aa20.71■□□□□ 0.91
RTN3P1-201ENST00000536295 PSME1Q06323 249 aa20.71■□□□□ 0.91
RTN3P1-201ENST00000536295 USP32Q8NFA0 1604 aa20.71■□□□□ 0.91
RTN3P1-201ENST00000536295 RBM6P78332 1123 aaKnown RBP20.7■□□□□ 0.9
RTN3P1-201ENST00000536295 WASLO00401 505 aaPredicted RBP20.69■□□□□ 0.9
RTN3P1-201ENST00000536295 LMOD2Q6P5Q4 547 aa20.69■□□□□ 0.9
RTN3P1-201ENST00000536295 ARHGEF28Q8N1W1 1705 aaKnown RBP20.68■□□□□ 0.9
RTN3P1-201ENST00000536295 FNBP4Q8N3X1 1017 aaPredicted RBP20.68■□□□□ 0.9
RTN3P1-201ENST00000536295 PRR36Q9H6K5 1346 aa20.68■□□□□ 0.9
RTN3P1-201ENST00000536295 TNS3Q68CZ2 1445 aa20.68■□□□□ 0.9
RTN3P1-201ENST00000536295 CDK12Q9NYV4 1490 aaPredicted RBP20.68■□□□□ 0.9
RTN3P1-201ENST00000536295 HAP1P54257 671 aaPredicted RBP20.67■□□□□ 0.9
RTN3P1-201ENST00000536295 EIF3AQ14152 1382 aaKnown RBP20.67■□□□□ 0.9
RTN3P1-201ENST00000536295 NBPF1Q3BBV0 1214 aa20.66■□□□□ 0.9
RTN3P1-201ENST00000536295 SIN3AQ96ST3 1273 aa20.66■□□□□ 0.9
RTN3P1-201ENST00000536295 TRPC5Q9UL62 973 aaPredicted RBP20.66■□□□□ 0.9
RTN3P1-201ENST00000536295 RGS12O14924 1447 aa20.66■□□□□ 0.9
RTN3P1-201ENST00000536295 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
RTN3P1-201ENST00000536295 CABLES1Q8TDN4 633 aa20.65■□□□□ 0.9
RTN3P1-201ENST00000536295 SBNO1A3KN83 1393 aa20.64■□□□□ 0.89
RTN3P1-201ENST00000536295 NEUROD1Q13562 356 aa20.64■□□□□ 0.89
RTN3P1-201ENST00000536295 KIAA1210Q9ULL0 1709 aa20.64■□□□□ 0.89
RTN3P1-201ENST00000536295 MARF1Q9Y4F3 1742 aaKnown RBP20.64■□□□□ 0.89
RTN3P1-201ENST00000536295 L3MBTL2Q969R5 705 aa20.63■□□□□ 0.89
RTN3P1-201ENST00000536295 UPF1Q92900 1129 aaKnown RBP eCLIP20.62■□□□□ 0.89
RTN3P1-201ENST00000536295 BCL9LQ86UU0 1499 aa20.62■□□□□ 0.89
RTN3P1-201ENST00000536295 ATRNO75882 1429 aa20.61■□□□□ 0.89
RTN3P1-201ENST00000536295 ARHGEF10O15013 1369 aa20.61■□□□□ 0.89
RTN3P1-201ENST00000536295 GPRASP1Q5JY77 1395 aa20.61■□□□□ 0.89
RTN3P1-201ENST00000536295 NGDNQ8NEJ9 315 aaKnown RBP20.61■□□□□ 0.89
RTN3P1-201ENST00000536295 NUDT16Q96DE0 195 aaKnown RBP20.6■□□□□ 0.89
RTN3P1-201ENST00000536295 CDK19Q9BWU1 502 aa20.6■□□□□ 0.89
RTN3P1-201ENST00000536295 ATP7BP35670 1465 aa20.58■□□□□ 0.89
RTN3P1-201ENST00000536295 PAK3O75914 559 aaPredicted RBP20.58■□□□□ 0.89
RTN3P1-201ENST00000536295 TRPM3Q9HCF6 1732 aaPredicted RBP20.57■□□□□ 0.88
RTN3P1-201ENST00000536295 UNC5CLQ8IV45 518 aa20.56■□□□□ 0.88
RTN3P1-201ENST00000536295 SLIT2O94813 1529 aa20.56■□□□□ 0.88
RTN3P1-201ENST00000536295 GJD4Q96KN9 370 aaPredicted RBP20.55■□□□□ 0.88
RTN3P1-201ENST00000536295 ITSN1Q15811 1721 aa20.55■□□□□ 0.88
RTN3P1-201ENST00000536295 ABCA3Q99758 1704 aa20.55■□□□□ 0.88
RTN3P1-201ENST00000536295 CENPJQ9HC77 1338 aaPredicted RBP20.54■□□□□ 0.88
RTN3P1-201ENST00000536295 ALS2Q96Q42 1657 aa20.52■□□□□ 0.88
RTN3P1-201ENST00000536295 SRPK2P78362 688 aaKnown RBP20.52■□□□□ 0.88
RTN3P1-201ENST00000536295 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.52■□□□□ 0.88
RTN3P1-201ENST00000536295 FAM83GA6ND36 823 aa20.51■□□□□ 0.87
RTN3P1-201ENST00000536295 CCDC61Q9Y6R9 512 aa20.51■□□□□ 0.87
RTN3P1-201ENST00000536295 RALGAPBQ86X10 1494 aa20.5■□□□□ 0.87
RTN3P1-201ENST00000536295 CCDC9Q9Y3X0 531 aaKnown RBP20.5■□□□□ 0.87
RTN3P1-201ENST00000536295 PLCH1Q4KWH8 1693 aa20.5■□□□□ 0.87
RTN3P1-201ENST00000536295 ACEP12821 1306 aa20.5■□□□□ 0.87
RTN3P1-201ENST00000536295 ATAD2Q6PL18 1390 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms