RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 JPH4Q96JJ6 628 aa8.82□□□□□ -1
CPSF7-215ENST00000536145 STAC3Q96MF2 364 aa8.82□□□□□ -1
CPSF7-215ENST00000536145 NAP1L5Q96NT1 182 aaPredicted RBP8.82□□□□□ -1
CPSF7-215ENST00000536145 GRPEL1Q9HAV7 217 aa8.82□□□□□ -1
CPSF7-215ENST00000536145 ERVK-7P63135 1459 aa8.82□□□□□ -1
CPSF7-215ENST00000536145 TRPM2O94759 1503 aa8.81□□□□□ -1
CPSF7-215ENST00000536145 SYCP2Q9BX26 1530 aa8.81□□□□□ -1
CPSF7-215ENST00000536145 ESPNB1AK53 854 aa8.81□□□□□ -1
CPSF7-215ENST00000536145 TPM2P07951 284 aa8.81□□□□□ -1
CPSF7-215ENST00000536145 RLBP1P12271 317 aa8.81□□□□□ -1
CPSF7-215ENST00000536145 HSP90AA2PQ14568 343 aaPredicted RBP8.81□□□□□ -1
CPSF7-215ENST00000536145 TNNQ9UQP3 1299 aa8.81□□□□□ -1
CPSF7-215ENST00000536145 MYO3AQ8NEV4 1616 aa8.8□□□□□ -1
CPSF7-215ENST00000536145 VSIG10Q8N0Z9 540 aa8.8□□□□□ -1
CPSF7-215ENST00000536145 SNX21Q969T3 373 aa8.8□□□□□ -1
CPSF7-215ENST00000536145 DDX11L8A8MPP1 907 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 CCDC27Q2M243 656 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 GAS2L3Q86XJ1 694 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 WDR63Q8IWG1 891 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 SMC5Q8IY18 1101 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 PPP1R9BQ96SB3 815 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 CARD14Q9BXL6 1004 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 UPF2Q9HAU5 1272 aaKnown RBP8.79□□□□□ -1
CPSF7-215ENST00000536145 CIZ1Q9ULV3 898 aaPredicted RBP8.79□□□□□ -1
CPSF7-215ENST00000536145 CLTCL1P53675 1640 aa8.79□□□□□ -1
CPSF7-215ENST00000536145 ADGRB2O60241 1585 aa8.78□□□□□ -1
CPSF7-215ENST00000536145 RBM25P49756 843 aaKnown RBP8.78□□□□□ -1
CPSF7-215ENST00000536145 C22orf23Q9BZE7 217 aa8.78□□□□□ -1
CPSF7-215ENST00000536145 RWDD1Q9H446 243 aaPredicted RBP8.78□□□□□ -1
CPSF7-215ENST00000536145 USP32Q8NFA0 1604 aa8.78□□□□□ -1
CPSF7-215ENST00000536145 MYOM2P54296 1465 aa8.77□□□□□ -1
CPSF7-215ENST00000536145 SBNO2Q9Y2G9 1366 aa8.77□□□□□ -1.01
CPSF7-215ENST00000536145 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.77□□□□□ -1.01
CPSF7-215ENST00000536145 TERF1P54274 439 aa8.77□□□□□ -1.01
CPSF7-215ENST00000536145 HDAC1Q13547 482 aaPredicted RBP8.77□□□□□ -1.01
CPSF7-215ENST00000536145 CLEC17AQ6ZS10 378 aa8.77□□□□□ -1.01
CPSF7-215ENST00000536145 MYH16Q9H6N6 1097 aa8.77□□□□□ -1.01
CPSF7-215ENST00000536145 MVPQ14764 893 aaKnown RBP8.76□□□□□ -1.01
CPSF7-215ENST00000536145 RAB3GAP1Q15042 981 aa8.76□□□□□ -1.01
CPSF7-215ENST00000536145 RUNDC1Q96C34 613 aa8.76□□□□□ -1.01
CPSF7-215ENST00000536145 VWDEQ8N2E2 1590 aa8.76□□□□□ -1.01
CPSF7-215ENST00000536145 ADGRL1O94910 1474 aa8.76□□□□□ -1.01
CPSF7-215ENST00000536145 ABCA6Q8N139 1617 aa8.76□□□□□ -1.01
CPSF7-215ENST00000536145 GZF1Q9H116 711 aaPredicted RBP8.75□□□□□ -1.01
CPSF7-215ENST00000536145 PDCL3Q9H2J4 239 aa8.75□□□□□ -1.01
CPSF7-215ENST00000536145 DEPDC5O75140 1603 aa8.75□□□□□ -1.01
CPSF7-215ENST00000536145 ZNF518AQ6AHZ1 1483 aa8.75□□□□□ -1.01
CPSF7-215ENST00000536145 NRXN1Q9ULB1 1477 aa8.75□□□□□ -1.01
CPSF7-215ENST00000536145 IBTKQ9P2D0 1353 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-215ENST00000536145 INO80Q9ULG1 1556 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-215ENST00000536145 MAP3K4Q9Y6R4 1608 aa8.74□□□□□ -1.01
CPSF7-215ENST00000536145 SLC24A1O60721 1099 aa8.74□□□□□ -1.01
CPSF7-215ENST00000536145 OFD1O75665 1012 aa8.74□□□□□ -1.01
CPSF7-215ENST00000536145 PTMSP20962 102 aa8.74□□□□□ -1.01
CPSF7-215ENST00000536145 SKOR2Q2VWA4 1001 aaPredicted RBP8.74□□□□□ -1.01
CPSF7-215ENST00000536145 TNPO1Q92973 898 aaKnown RBP8.74□□□□□ -1.01
CPSF7-215ENST00000536145 IFT172Q9UG01 1749 aa8.74□□□□□ -1.01
CPSF7-215ENST00000536145 TET3O43151 1660 aa8.73□□□□□ -1.01
CPSF7-215ENST00000536145 ZC3H13Q5T200 1668 aaKnown RBP8.73□□□□□ -1.01
CPSF7-215ENST00000536145 CT47B1P0C2W7 299 aaPredicted RBP8.73□□□□□ -1.01
CPSF7-215ENST00000536145 RIPK4P57078 832 aa8.73□□□□□ -1.01
CPSF7-215ENST00000536145 CALD1Q05682 793 aaKnown RBP8.73□□□□□ -1.01
CPSF7-215ENST00000536145 KIF2CQ99661 725 aa8.73□□□□□ -1.01
CPSF7-215ENST00000536145 ARHGAP5Q13017 1502 aa8.73□□□□□ -1.01
CPSF7-215ENST00000536145 CANXP27824 592 aaKnown RBP8.72□□□□□ -1.01
CPSF7-215ENST00000536145 MFAP1P55081 439 aaKnown RBP8.72□□□□□ -1.01
CPSF7-215ENST00000536145 CCDC173Q0VFZ6 552 aa8.72□□□□□ -1.01
CPSF7-215ENST00000536145 HSCBQ8IWL3 235 aa8.72□□□□□ -1.01
CPSF7-215ENST00000536145 TCP11L2Q8N4U5 519 aa8.72□□□□□ -1.01
CPSF7-215ENST00000536145 SPRYD3Q8NCJ5 442 aa8.72□□□□□ -1.01
CPSF7-215ENST00000536145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.72□□□□□ -1.012e-8■■□□□ 13
CPSF7-215ENST00000536145 PRDM4Q9UKN5 801 aa8.72□□□□□ -1.01
CPSF7-215ENST00000536145 CFAP74Q9C0B2 1584 aa8.72□□□□□ -1.01
CPSF7-215ENST00000536145 NOS1P29475 1434 aa8.71□□□□□ -1.01
CPSF7-215ENST00000536145 ABCC1P33527 1531 aa8.71□□□□□ -1.01
CPSF7-215ENST00000536145 SETBP1Q9Y6X0 1596 aa8.71□□□□□ -1.02
CPSF7-215ENST00000536145 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.02
CPSF7-215ENST00000536145 ZSCAN30Q86W11 494 aa8.71□□□□□ -1.02
CPSF7-215ENST00000536145 ZNF445P59923 1031 aa8.7□□□□□ -1.02
CPSF7-215ENST00000536145 HS1BP3Q53T59 392 aa8.7□□□□□ -1.02
CPSF7-215ENST00000536145 DZIP1LQ8IYY4 767 aaKnown RBP8.7□□□□□ -1.02
CPSF7-215ENST00000536145 GBP4Q96PP9 640 aa8.7□□□□□ -1.02
CPSF7-215ENST00000536145 ARXQ96QS3 562 aa8.7□□□□□ -1.02
CPSF7-215ENST00000536145 REREQ9P2R6 1566 aa8.69□□□□□ -1.02
CPSF7-215ENST00000536145 NUCB1Q02818 461 aa8.69□□□□□ -1.02
CPSF7-215ENST00000536145 KIAA1211Q6ZU35 1233 aa8.69□□□□□ -1.02
CPSF7-215ENST00000536145 PLCH2O75038 1416 aa8.69□□□□□ -1.02
CPSF7-215ENST00000536145 NSD3Q9BZ95 1437 aa8.69□□□□□ -1.02
CPSF7-215ENST00000536145 ZNF500O60304 480 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-215ENST00000536145 CYP2E1P05181 493 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-215ENST00000536145 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-215ENST00000536145 PDLIM2Q96JY6 352 aa8.68□□□□□ -1.02
CPSF7-215ENST00000536145 ZBTB40Q9NUA8 1239 aa8.68□□□□□ -1.02
CPSF7-215ENST00000536145 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.68□□□□□ -1.02
CPSF7-215ENST00000536145 RRP7AQ9Y3A4 280 aaKnown RBP8.68□□□□□ -1.02
CPSF7-215ENST00000536145 TRAPPC8Q9Y2L5 1435 aa8.68□□□□□ -1.02
CPSF7-215ENST00000536145 MED14O60244 1454 aa8.68□□□□□ -1.02
CPSF7-215ENST00000536145 COL3A1P02461 1466 aaPredicted RBP8.68□□□□□ -1.02
CPSF7-215ENST00000536145 PPRC1Q5VV67 1664 aaKnown RBP8.68□□□□□ -1.02
CPSF7-215ENST00000536145 CD2BP2O95400 341 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms