RNA–Protein interactions for RNA: ENST00000536000.1

VPS37C-203, Transcript of VPS37C, ESCRT-I subunit, humanhuman

TSL 2

Gene VPS37C, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS37C-203ENST00000536000 ORAI2Q96SN7 254 aa18.32■□□□□ 0.52
VPS37C-203ENST00000536000 C1orf167Q5SNV9 1468 aa18.32■□□□□ 0.52
VPS37C-203ENST00000536000 NUTM2FA1L443 756 aa18.31■□□□□ 0.52
VPS37C-203ENST00000536000 NBPF1Q3BBV0 1214 aa18.31■□□□□ 0.52
VPS37C-203ENST00000536000 KNDC1Q76NI1 1749 aa18.31■□□□□ 0.52
VPS37C-203ENST00000536000 ESCO1Q5FWF5 840 aa18.3■□□□□ 0.52
VPS37C-203ENST00000536000 ADGRB1O14514 1584 aa18.3■□□□□ 0.52
VPS37C-203ENST00000536000 PHLPP1O60346 1717 aa18.29■□□□□ 0.52
VPS37C-203ENST00000536000 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
VPS37C-203ENST00000536000 DLC1Q96QB1 1528 aa18.28■□□□□ 0.52
VPS37C-203ENST00000536000 LRRC59Q96AG4 307 aaKnown RBP18.27■□□□□ 0.52
VPS37C-203ENST00000536000 JCADQ9P266 1359 aa18.27■□□□□ 0.51
VPS37C-203ENST00000536000 MINK1Q8N4C8 1332 aaPredicted RBP18.26■□□□□ 0.51
VPS37C-203ENST00000536000 HIRIP3Q9BW71 556 aaPredicted RBP18.25■□□□□ 0.51
VPS37C-203ENST00000536000 TONSLQ96HA7 1378 aa18.25■□□□□ 0.51
VPS37C-203ENST00000536000 AHDC1Q5TGY3 1603 aaPredicted RBP18.24■□□□□ 0.51
VPS37C-203ENST00000536000 PHF23Q9BUL5 403 aaPredicted RBP18.24■□□□□ 0.51
VPS37C-203ENST00000536000 CDC42BPGQ6DT37 1551 aa18.24■□□□□ 0.51
VPS37C-203ENST00000536000 FOXO3O43524 673 aa18.23■□□□□ 0.51
VPS37C-203ENST00000536000 KIAA1210Q9ULL0 1709 aa18.22■□□□□ 0.51
VPS37C-203ENST00000536000 WASLO00401 505 aaPredicted RBP18.21■□□□□ 0.51
VPS37C-203ENST00000536000 NBPF8Q3BBV2 869 aa18.21■□□□□ 0.51
VPS37C-203ENST00000536000 MED1Q15648 1581 aaPredicted RBP18.21■□□□□ 0.51
VPS37C-203ENST00000536000 NPHP3Q7Z494 1330 aa18.21■□□□□ 0.51
VPS37C-203ENST00000536000 COL16A1Q07092 1604 aaPredicted RBP18.2■□□□□ 0.5
VPS37C-203ENST00000536000 PHF8Q9UPP1 1060 aa18.2■□□□□ 0.5
VPS37C-203ENST00000536000 SOS2Q07890 1332 aaPredicted RBP18.2■□□□□ 0.5
VPS37C-203ENST00000536000 SPATA31A6Q5VVP1 1343 aa18.2■□□□□ 0.5
VPS37C-203ENST00000536000 NUTM2BA6NNL0 878 aaPredicted RBP18.18■□□□□ 0.5
VPS37C-203ENST00000536000 NUTM2EB1AL46 878 aaPredicted RBP18.18■□□□□ 0.5
VPS37C-203ENST00000536000 NUTM2AQ8IVF1 878 aaPredicted RBP18.18■□□□□ 0.5
VPS37C-203ENST00000536000 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
VPS37C-203ENST00000536000 NHSL1Q5SYE7 1610 aa18.17■□□□□ 0.5
VPS37C-203ENST00000536000 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
VPS37C-203ENST00000536000 CDK19Q9BWU1 502 aa18.17■□□□□ 0.5
VPS37C-203ENST00000536000 FMN2Q9NZ56 1722 aa18.17■□□□□ 0.5
VPS37C-203ENST00000536000 CENPJQ9HC77 1338 aaPredicted RBP18.17■□□□□ 0.5
VPS37C-203ENST00000536000 MEX3CQ5U5Q3 659 aaKnown RBP18.16■□□□□ 0.5
VPS37C-203ENST00000536000 KRT28Q7Z3Y7 464 aa18.16■□□□□ 0.5
VPS37C-203ENST00000536000 EIF3AQ14152 1382 aaKnown RBP18.16■□□□□ 0.5
VPS37C-203ENST00000536000 PSME1Q06323 249 aa18.15■□□□□ 0.5
VPS37C-203ENST00000536000 PMFBP1Q8TBY8 1022 aa18.15■□□□□ 0.5
VPS37C-203ENST00000536000 CLSPNQ9HAW4 1339 aa18.15■□□□□ 0.5
VPS37C-203ENST00000536000 ILDR2Q71H61 639 aa18.14■□□□□ 0.49
VPS37C-203ENST00000536000 ARHGEF28Q8N1W1 1705 aaKnown RBP18.14■□□□□ 0.49
VPS37C-203ENST00000536000 ANKARQ7Z5J8 1434 aa18.14■□□□□ 0.49
VPS37C-203ENST00000536000 CCER1Q8TC90 406 aaPredicted RBP18.13■□□□□ 0.49
VPS37C-203ENST00000536000 NUDT16Q96DE0 195 aaKnown RBP18.13■□□□□ 0.49
VPS37C-203ENST00000536000 CARD11Q9BXL7 1154 aa18.13■□□□□ 0.49
VPS37C-203ENST00000536000 PNPLA6Q8IY17 1366 aa18.13■□□□□ 0.49
VPS37C-203ENST00000536000 RGPD8O14715 1765 aaPredicted RBP18.12■□□□□ 0.49
VPS37C-203ENST00000536000 PRR36Q9H6K5 1346 aa18.12■□□□□ 0.49
VPS37C-203ENST00000536000 NGDNQ8NEJ9 315 aaKnown RBP18.11■□□□□ 0.49
VPS37C-203ENST00000536000 RGS17Q9UGC6 210 aaPredicted RBP18.11■□□□□ 0.49
VPS37C-203ENST00000536000 TIMELESSQ9UNS1 1208 aa18.11■□□□□ 0.49
VPS37C-203ENST00000536000 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
VPS37C-203ENST00000536000 TRPM1Q7Z4N2 1603 aa18.11■□□□□ 0.49
VPS37C-203ENST00000536000 SHPRHQ149N8 1683 aa18.1■□□□□ 0.49
VPS37C-203ENST00000536000 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
VPS37C-203ENST00000536000 CCDC61Q9Y6R9 512 aa18.09■□□□□ 0.49
VPS37C-203ENST00000536000 SPATA31A3Q5VYP0 1347 aa18.08■□□□□ 0.49
VPS37C-203ENST00000536000 TULP4Q9NRJ4 1543 aa18.08■□□□□ 0.48
VPS37C-203ENST00000536000 PXDNQ92626 1479 aa18.07■□□□□ 0.48
VPS37C-203ENST00000536000 GPRASP1Q5JY77 1395 aa18.07■□□□□ 0.48
VPS37C-203ENST00000536000 KIF1AQ12756 1690 aa18.07■□□□□ 0.48
VPS37C-203ENST00000536000 LMOD2Q6P5Q4 547 aa18.07■□□□□ 0.48
VPS37C-203ENST00000536000 CABP2Q9NPB3 220 aa18.07■□□□□ 0.48
VPS37C-203ENST00000536000 EVC2Q86UK5 1308 aa18.06■□□□□ 0.48
VPS37C-203ENST00000536000 ADAMTS2O95450 1211 aa18.06■□□□□ 0.48
VPS37C-203ENST00000536000 LRP6O75581 1613 aa18.05■□□□□ 0.48
VPS37C-203ENST00000536000 USP32Q8NFA0 1604 aa18.05■□□□□ 0.48
VPS37C-203ENST00000536000 PLEKHG3A1L390 1219 aa18.04■□□□□ 0.48
VPS37C-203ENST00000536000 ZNF772Q68DY9 489 aaPredicted RBP18.04■□□□□ 0.48
VPS37C-203ENST00000536000 POTEAQ6S8J7 498 aa18.04■□□□□ 0.48
VPS37C-203ENST00000536000 NGLY1Q96IV0 654 aa18.04■□□□□ 0.48
VPS37C-203ENST00000536000 C8orf37Q96NL8 207 aa18.04■□□□□ 0.48
VPS37C-203ENST00000536000 SBNO1A3KN83 1393 aa18.04■□□□□ 0.48
VPS37C-203ENST00000536000 PAK3O75914 559 aaPredicted RBP18.03■□□□□ 0.48
VPS37C-203ENST00000536000 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
VPS37C-203ENST00000536000 PLEKHG5O94827 1062 aa18.02■□□□□ 0.48
VPS37C-203ENST00000536000 ACEP12821 1306 aa18.01■□□□□ 0.47
VPS37C-203ENST00000536000 HAP1P54257 671 aaPredicted RBP18.01■□□□□ 0.47
VPS37C-203ENST00000536000 ATP7BP35670 1465 aa18.01■□□□□ 0.47
VPS37C-203ENST00000536000 AFF2P51816 1311 aa18■□□□□ 0.47
VPS37C-203ENST00000536000 TNS3Q68CZ2 1445 aa18■□□□□ 0.47
VPS37C-203ENST00000536000 CABP1Q9NZU7 370 aa18■□□□□ 0.47
VPS37C-203ENST00000536000 QRICH2Q9H0J4 1663 aa17.99■□□□□ 0.47
VPS37C-203ENST00000536000 ARHGEF10O15013 1369 aa17.99■□□□□ 0.47
VPS37C-203ENST00000536000 CABLES1Q8TDN4 633 aa17.98■□□□□ 0.47
VPS37C-203ENST00000536000 ST20-MTHFSA0A0A6YYL1 179 aa17.97■□□□□ 0.47
VPS37C-203ENST00000536000 PPIP5K1Q6PFW1 1433 aa17.97■□□□□ 0.47
VPS37C-203ENST00000536000 POLR3AO14802 1390 aaPredicted RBP17.96■□□□□ 0.47
VPS37C-203ENST00000536000 ITSN1Q15811 1721 aa17.96■□□□□ 0.47
VPS37C-203ENST00000536000 SOCS7O14512 581 aa17.96■□□□□ 0.47
VPS37C-203ENST00000536000 SLC24A1O60721 1099 aa17.96■□□□□ 0.47
VPS37C-203ENST00000536000 QTRT2Q9H974 415 aaKnown RBP17.96■□□□□ 0.47
VPS37C-203ENST00000536000 COL22A1Q8NFW1 1626 aaPredicted RBP17.96■□□□□ 0.47
VPS37C-203ENST00000536000 SBNO2Q9Y2G9 1366 aa17.95■□□□□ 0.46
VPS37C-203ENST00000536000 USP21Q9UK80 565 aa17.95■□□□□ 0.46
VPS37C-203ENST00000536000 RXRBP28702 533 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms