RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 NPHP3Q7Z494 1330 aa19.41■□□□□ 0.7
TNFRSF1A-207ENST00000535958 ESCO1Q5FWF5 840 aa19.4■□□□□ 0.7
TNFRSF1A-207ENST00000535958 TRPC5Q9UL62 973 aaPredicted RBP19.39■□□□□ 0.69
TNFRSF1A-207ENST00000535958 ATAD2Q6PL18 1390 aa19.38■□□□□ 0.69
TNFRSF1A-207ENST00000535958 COL22A1Q8NFW1 1626 aaPredicted RBP19.37■□□□□ 0.69
TNFRSF1A-207ENST00000535958 LRPPRCP42704 1394 aaKnown RBP19.37■□□□□ 0.69
TNFRSF1A-207ENST00000535958 FOXD1Q16676 465 aa19.36■□□□□ 0.69
TNFRSF1A-207ENST00000535958 RGL3Q3MIN7 710 aa19.36■□□□□ 0.69
TNFRSF1A-207ENST00000535958 STK26Q9P289 416 aa19.36■□□□□ 0.69
TNFRSF1A-207ENST00000535958 ANKRD30BQ9BXX2 1392 aa19.35■□□□□ 0.69
TNFRSF1A-207ENST00000535958 ADGRF5Q8IZF2 1346 aa19.33■□□□□ 0.69
TNFRSF1A-207ENST00000535958 KNDC1Q76NI1 1749 aa19.32■□□□□ 0.68
TNFRSF1A-207ENST00000535958 NUTM2FA1L443 756 aa19.32■□□□□ 0.68
TNFRSF1A-207ENST00000535958 FNBP4Q8N3X1 1017 aaPredicted RBP19.32■□□□□ 0.68
TNFRSF1A-207ENST00000535958 MYOM2P54296 1465 aa19.32■□□□□ 0.68
TNFRSF1A-207ENST00000535958 PXDNQ92626 1479 aa19.32■□□□□ 0.68
TNFRSF1A-207ENST00000535958 TECPR2O15040 1411 aa19.32■□□□□ 0.68
TNFRSF1A-207ENST00000535958 IFT172Q9UG01 1749 aa19.31■□□□□ 0.68
TNFRSF1A-207ENST00000535958 FOXO3O43524 673 aa19.31■□□□□ 0.68
TNFRSF1A-207ENST00000535958 XPCQ01831 940 aaPredicted RBP19.31■□□□□ 0.68
TNFRSF1A-207ENST00000535958 WAPLQ7Z5K2 1190 aa19.3■□□□□ 0.68
TNFRSF1A-207ENST00000535958 ATRNO75882 1429 aa19.3■□□□□ 0.68
TNFRSF1A-207ENST00000535958 MARF1Q9Y4F3 1742 aaKnown RBP19.3■□□□□ 0.68
TNFRSF1A-207ENST00000535958 KIF1AQ12756 1690 aa19.3■□□□□ 0.68
TNFRSF1A-207ENST00000535958 SPATA31E1Q6ZUB1 1445 aa19.29■□□□□ 0.68
TNFRSF1A-207ENST00000535958 MPHOSPH9Q99550 1183 aa19.28■□□□□ 0.68
TNFRSF1A-207ENST00000535958 ABCC11Q96J66 1382 aa19.28■□□□□ 0.68
TNFRSF1A-207ENST00000535958 PIK3C2GO75747 1445 aa19.27■□□□□ 0.68
TNFRSF1A-207ENST00000535958 HAP1P54257 671 aaPredicted RBP19.27■□□□□ 0.68
TNFRSF1A-207ENST00000535958 TMEM132EQ6IEE7 984 aa19.27■□□□□ 0.68
TNFRSF1A-207ENST00000535958 FMN2Q9NZ56 1722 aa19.27■□□□□ 0.68
TNFRSF1A-207ENST00000535958 YTHDC2Q9H6S0 1430 aaKnown RBP19.26■□□□□ 0.67
TNFRSF1A-207ENST00000535958 PLEKHH1Q9ULM0 1364 aa19.25■□□□□ 0.67
TNFRSF1A-207ENST00000535958 ACIN1Q9UKV3 1341 aaKnown RBP19.25■□□□□ 0.67
TNFRSF1A-207ENST00000535958 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.22■□□□□ 0.67
TNFRSF1A-207ENST00000535958 BCL9LQ86UU0 1499 aa19.22■□□□□ 0.67
TNFRSF1A-207ENST00000535958 GJD4Q96KN9 370 aaPredicted RBP19.22■□□□□ 0.67
TNFRSF1A-207ENST00000535958 DHX57Q6P158 1386 aaKnown RBP19.21■□□□□ 0.67
TNFRSF1A-207ENST00000535958 PSME1Q06323 249 aa19.21■□□□□ 0.67
TNFRSF1A-207ENST00000535958 ZRANB1Q9UGI0 708 aa19.21■□□□□ 0.67
TNFRSF1A-207ENST00000535958 SPATA31A3Q5VYP0 1347 aa19.21■□□□□ 0.67
TNFRSF1A-207ENST00000535958 KRT28Q7Z3Y7 464 aa19.2■□□□□ 0.66
TNFRSF1A-207ENST00000535958 CCDC125Q86Z20 511 aa19.2■□□□□ 0.66
TNFRSF1A-207ENST00000535958 USP32Q8NFA0 1604 aa19.2■□□□□ 0.66
TNFRSF1A-207ENST00000535958 TNS3Q68CZ2 1445 aa19.19■□□□□ 0.66
TNFRSF1A-207ENST00000535958 UNC5CLQ8IV45 518 aa19.19■□□□□ 0.66
TNFRSF1A-207ENST00000535958 LMOD2Q6P5Q4 547 aa19.18■□□□□ 0.66
TNFRSF1A-207ENST00000535958 PHF8Q9UPP1 1060 aa19.18■□□□□ 0.66
TNFRSF1A-207ENST00000535958 PLEKHG5O94827 1062 aa19.17■□□□□ 0.66
TNFRSF1A-207ENST00000535958 SIRT1Q96EB6 747 aa19.17■□□□□ 0.66
TNFRSF1A-207ENST00000535958 RALGAPBQ86X10 1494 aa19.16■□□□□ 0.66
TNFRSF1A-207ENST00000535958 SLIT2O94813 1529 aa19.16■□□□□ 0.66
TNFRSF1A-207ENST00000535958 SAFB2Q14151 953 aaKnown RBP eCLIP19.16■□□□□ 0.66
TNFRSF1A-207ENST00000535958 C14orf93Q9H972 538 aaKnown RBP19.16■□□□□ 0.66
TNFRSF1A-207ENST00000535958 POGKQ9P215 609 aa19.16■□□□□ 0.66
TNFRSF1A-207ENST00000535958 CFAP70Q5T0N1 1121 aa19.15■□□□□ 0.66
TNFRSF1A-207ENST00000535958 PRAM1Q96QH2 718 aa19.15■□□□□ 0.66
TNFRSF1A-207ENST00000535958 CCDC9Q9Y3X0 531 aaKnown RBP19.15■□□□□ 0.66
TNFRSF1A-207ENST00000535958 RGPD8O14715 1765 aaPredicted RBP19.14■□□□□ 0.66
TNFRSF1A-207ENST00000535958 SF3B2Q13435 895 aaKnown RBP19.14■□□□□ 0.65
TNFRSF1A-207ENST00000535958 ARHGEF10O15013 1369 aa19.14■□□□□ 0.65
TNFRSF1A-207ENST00000535958 NRXN1Q9ULB1 1477 aa19.14■□□□□ 0.65
TNFRSF1A-207ENST00000535958 GLI3P10071 1580 aa19.14■□□□□ 0.65
TNFRSF1A-207ENST00000535958 PLCH1Q4KWH8 1693 aa19.12■□□□□ 0.65
TNFRSF1A-207ENST00000535958 EP400Q96L91 3159 aa19.12■□□□□ 0.65
TNFRSF1A-207ENST00000535958 BLMP54132 1417 aaPredicted RBP19.11■□□□□ 0.65
TNFRSF1A-207ENST00000535958 SBNO1A3KN83 1393 aa19.11■□□□□ 0.65
TNFRSF1A-207ENST00000535958 A0A0G2JS52 829 aa19.11■□□□□ 0.65
TNFRSF1A-207ENST00000535958 MYT1Q01538 1121 aa19.11■□□□□ 0.65
TNFRSF1A-207ENST00000535958 NWD2Q9ULI1 1742 aa19.11■□□□□ 0.65
TNFRSF1A-207ENST00000535958 DLC1Q96QB1 1528 aa19.1■□□□□ 0.65
TNFRSF1A-207ENST00000535958 ANKARQ7Z5J8 1434 aa19.1■□□□□ 0.65
TNFRSF1A-207ENST00000535958 EIF3AQ14152 1382 aaKnown RBP19.1■□□□□ 0.65
TNFRSF1A-207ENST00000535958 CABLES1Q8TDN4 633 aa19.1■□□□□ 0.65
TNFRSF1A-207ENST00000535958 ABCA3Q99758 1704 aa19.1■□□□□ 0.65
TNFRSF1A-207ENST00000535958 VPS72Q15906 364 aa19.09■□□□□ 0.65
TNFRSF1A-207ENST00000535958 PMFBP1Q8TBY8 1022 aa19.09■□□□□ 0.65
TNFRSF1A-207ENST00000535958 ADGRB2O60241 1585 aa19.08■□□□□ 0.65
TNFRSF1A-207ENST00000535958 SEPT12Q8IYM1 358 aa19.08■□□□□ 0.64
TNFRSF1A-207ENST00000535958 GPRASP1Q5JY77 1395 aa19.07■□□□□ 0.64
TNFRSF1A-207ENST00000535958 BRWD3Q6RI45 1802 aa19.07■□□□□ 0.64
TNFRSF1A-207ENST00000535958 RAB3GAP2Q9H2M9 1393 aa19.06■□□□□ 0.64
TNFRSF1A-207ENST00000535958 HIRIP3Q9BW71 556 aaPredicted RBP19.05■□□□□ 0.64
TNFRSF1A-207ENST00000535958 TRAK1Q9UPV9 953 aa19.05■□□□□ 0.64
TNFRSF1A-207ENST00000535958 MINK1Q8N4C8 1332 aaPredicted RBP19.03■□□□□ 0.64
TNFRSF1A-207ENST00000535958 SRCAPQ6ZRS2 3230 aa19.03■□□□□ 0.64
TNFRSF1A-207ENST00000535958 KRT27Q7Z3Y8 459 aa19.03■□□□□ 0.64
TNFRSF1A-207ENST00000535958 ADGRB1O14514 1584 aa19.02■□□□□ 0.64
TNFRSF1A-207ENST00000535958 TULP4Q9NRJ4 1543 aa19.02■□□□□ 0.64
TNFRSF1A-207ENST00000535958 KDM2AQ9Y2K7 1162 aa19.02■□□□□ 0.64
TNFRSF1A-207ENST00000535958 DCAF11Q8TEB1 546 aa19.01■□□□□ 0.63
TNFRSF1A-207ENST00000535958 TRPM3Q9HCF6 1732 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-207ENST00000535958 PAK3O75914 559 aaPredicted RBP19■□□□□ 0.63
TNFRSF1A-207ENST00000535958 DEFB132Q7Z7B7 95 aa19■□□□□ 0.63
TNFRSF1A-207ENST00000535958 NGDNQ8NEJ9 315 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-207ENST00000535958 BTG4Q9NY30 223 aa19■□□□□ 0.63
TNFRSF1A-207ENST00000535958 COL14A1Q05707 1796 aaKnown RBP19■□□□□ 0.63
TNFRSF1A-207ENST00000535958 FAM83GA6ND36 823 aa18.99■□□□□ 0.63
TNFRSF1A-207ENST00000535958 NRAPQ86VF7 1730 aa18.99■□□□□ 0.63
TNFRSF1A-207ENST00000535958 ALS2Q96Q42 1657 aa18.98■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms