RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 DLC1Q96QB1 1528 aa24.05■■□□□ 1.44
ATL3-202ENST00000535789 STK26Q9P289 416 aa24.05■■□□□ 1.44
ATL3-202ENST00000535789 LRP6O75581 1613 aa24.03■■□□□ 1.44
ATL3-202ENST00000535789 WAPLQ7Z5K2 1190 aa24.03■■□□□ 1.44
ATL3-202ENST00000535789 ADGRB2O60241 1585 aa24.02■■□□□ 1.44
ATL3-202ENST00000535789 USP32Q8NFA0 1604 aa24.02■■□□□ 1.44
ATL3-202ENST00000535789 DCAF11Q8TEB1 546 aa24.01■■□□□ 1.43
ATL3-202ENST00000535789 JCADQ9P266 1359 aa24■■□□□ 1.43
ATL3-202ENST00000535789 DDX17Q92841 729 aaKnown RBP23.98■■□□□ 1.43
ATL3-202ENST00000535789 KDM2AQ9Y2K7 1162 aa23.98■■□□□ 1.43
ATL3-202ENST00000535789 KIF1AQ12756 1690 aa23.96■■□□□ 1.43
ATL3-202ENST00000535789 ORAI2Q96SN7 254 aa23.95■■□□□ 1.42
ATL3-202ENST00000535789 RGS17Q9UGC6 210 aaPredicted RBP23.94■■□□□ 1.42
ATL3-202ENST00000535789 TRPM1Q7Z4N2 1603 aa23.93■■□□□ 1.42
ATL3-202ENST00000535789 COL22A1Q8NFW1 1626 aaPredicted RBP23.92■■□□□ 1.42
ATL3-202ENST00000535789 SIRT1Q96EB6 747 aa23.92■■□□□ 1.42
ATL3-202ENST00000535789 PXDNQ92626 1479 aa23.92■■□□□ 1.42
ATL3-202ENST00000535789 PRAM1Q96QH2 718 aa23.89■■□□□ 1.41
ATL3-202ENST00000535789 SIN3AQ96ST3 1273 aa23.88■■□□□ 1.41
ATL3-202ENST00000535789 PNPLA6Q8IY17 1366 aa23.88■■□□□ 1.41
ATL3-202ENST00000535789 MARF1Q9Y4F3 1742 aaKnown RBP23.87■■□□□ 1.41
ATL3-202ENST00000535789 STAC3Q96MF2 364 aa23.87■■□□□ 1.41
ATL3-202ENST00000535789 NUTM2FA1L443 756 aa23.86■■□□□ 1.41
ATL3-202ENST00000535789 SAFB2Q14151 953 aaKnown RBP eCLIP23.86■■□□□ 1.41
ATL3-202ENST00000535789 PHF23Q9BUL5 403 aaPredicted RBP23.86■■□□□ 1.41
ATL3-202ENST00000535789 SOS2Q07890 1332 aaPredicted RBP23.85■■□□□ 1.41
ATL3-202ENST00000535789 TRIM26Q12899 539 aaPredicted RBP23.85■■□□□ 1.41
ATL3-202ENST00000535789 TRAK1Q9UPV9 953 aa23.85■■□□□ 1.41
ATL3-202ENST00000535789 SPATA31A6Q5VVP1 1343 aa23.84■■□□□ 1.41
ATL3-202ENST00000535789 ITSN1Q15811 1721 aa23.84■■□□□ 1.41
ATL3-202ENST00000535789 TOPAZ1Q8N9V7 1692 aa23.84■■□□□ 1.41
ATL3-202ENST00000535789 QRICH2Q9H0J4 1663 aa23.84■■□□□ 1.41
ATL3-202ENST00000535789 ABCA3Q99758 1704 aa23.84■■□□□ 1.41
ATL3-202ENST00000535789 TRPM3Q9HCF6 1732 aaPredicted RBP23.83■■□□□ 1.41
ATL3-202ENST00000535789 TULP4Q9NRJ4 1543 aa23.82■■□□□ 1.4
ATL3-202ENST00000535789 L3MBTL2Q969R5 705 aa23.81■■□□□ 1.4
ATL3-202ENST00000535789 ESCO1Q5FWF5 840 aa23.8■■□□□ 1.4
ATL3-202ENST00000535789 NBPF1Q3BBV0 1214 aa23.79■■□□□ 1.4
ATL3-202ENST00000535789 ANKARQ7Z5J8 1434 aa23.78■■□□□ 1.4
ATL3-202ENST00000535789 LRRC59Q96AG4 307 aaKnown RBP23.78■■□□□ 1.4
ATL3-202ENST00000535789 POTEAQ6S8J7 498 aa23.77■■□□□ 1.4
ATL3-202ENST00000535789 HIRIP3Q9BW71 556 aaPredicted RBP23.77■■□□□ 1.4
ATL3-202ENST00000535789 POGKQ9P215 609 aa23.77■■□□□ 1.4
ATL3-202ENST00000535789 ATP7BP35670 1465 aa23.76■■□□□ 1.39
ATL3-202ENST00000535789 XPCQ01831 940 aaPredicted RBP23.76■■□□□ 1.39
ATL3-202ENST00000535789 MINK1Q8N4C8 1332 aaPredicted RBP23.76■■□□□ 1.39
ATL3-202ENST00000535789 PRR36Q9H6K5 1346 aa23.76■■□□□ 1.39
ATL3-202ENST00000535789 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
ATL3-202ENST00000535789 SOCS7O14512 581 aa23.75■■□□□ 1.39
ATL3-202ENST00000535789 NPHP3Q7Z494 1330 aa23.75■■□□□ 1.39
ATL3-202ENST00000535789 CRYBG1Q9Y4K1 1723 aa23.75■■□□□ 1.39
ATL3-202ENST00000535789 FOXO3O43524 673 aa23.74■■□□□ 1.39
ATL3-202ENST00000535789 NUTM2BA6NNL0 878 aaPredicted RBP23.73■■□□□ 1.39
ATL3-202ENST00000535789 NUTM2EB1AL46 878 aaPredicted RBP23.73■■□□□ 1.39
ATL3-202ENST00000535789 NEUROD1Q13562 356 aa23.73■■□□□ 1.39
ATL3-202ENST00000535789 NUTM2AQ8IVF1 878 aaPredicted RBP23.73■■□□□ 1.39
ATL3-202ENST00000535789 PHF8Q9UPP1 1060 aa23.68■■□□□ 1.38
ATL3-202ENST00000535789 TNS3Q68CZ2 1445 aa23.67■■□□□ 1.38
ATL3-202ENST00000535789 WASLO00401 505 aaPredicted RBP23.67■■□□□ 1.38
ATL3-202ENST00000535789 NBPF8Q3BBV2 869 aa23.66■■□□□ 1.38
ATL3-202ENST00000535789 MEX3CQ5U5Q3 659 aaKnown RBP23.66■■□□□ 1.38
ATL3-202ENST00000535789 SPATA31A3Q5VYP0 1347 aa23.65■■□□□ 1.38
ATL3-202ENST00000535789 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.65■■□□□ 1.38
ATL3-202ENST00000535789 PLCH1Q4KWH8 1693 aa23.65■■□□□ 1.38
ATL3-202ENST00000535789 EIF3AQ14152 1382 aaKnown RBP23.65■■□□□ 1.38
ATL3-202ENST00000535789 AFF2P51816 1311 aa23.63■■□□□ 1.37
ATL3-202ENST00000535789 PMFBP1Q8TBY8 1022 aa23.63■■□□□ 1.37
ATL3-202ENST00000535789 RALGAPBQ86X10 1494 aa23.62■■□□□ 1.37
ATL3-202ENST00000535789 KRT28Q7Z3Y7 464 aa23.62■■□□□ 1.37
ATL3-202ENST00000535789 GPRASP1Q5JY77 1395 aa23.62■■□□□ 1.37
ATL3-202ENST00000535789 SBNO1A3KN83 1393 aa23.61■■□□□ 1.37
ATL3-202ENST00000535789 PHRF1Q9P1Y6 1649 aaKnown RBP23.6■■□□□ 1.37
ATL3-202ENST00000535789 ADAMTS2O95450 1211 aa23.6■■□□□ 1.37
ATL3-202ENST00000535789 C8orf37Q96NL8 207 aa23.6■■□□□ 1.37
ATL3-202ENST00000535789 ROCK2O75116 1388 aaKnown RBP23.6■■□□□ 1.37
ATL3-202ENST00000535789 CENPJQ9HC77 1338 aaPredicted RBP23.59■■□□□ 1.37
ATL3-202ENST00000535789 PCGF6Q9BYE7 350 aa23.58■■□□□ 1.37
ATL3-202ENST00000535789 AKAP12Q02952 1782 aa23.57■■□□□ 1.36
ATL3-202ENST00000535789 NRAPQ86VF7 1730 aa23.57■■□□□ 1.36
ATL3-202ENST00000535789 CDK19Q9BWU1 502 aa23.57■■□□□ 1.36
ATL3-202ENST00000535789 NWD2Q9ULI1 1742 aa23.56■■□□□ 1.36
ATL3-202ENST00000535789 TONSLQ96HA7 1378 aa23.56■■□□□ 1.36
ATL3-202ENST00000535789 ZNF772Q68DY9 489 aaPredicted RBP23.56■■□□□ 1.36
ATL3-202ENST00000535789 NUDT16Q96DE0 195 aaKnown RBP23.56■■□□□ 1.36
ATL3-202ENST00000535789 BCL9LQ86UU0 1499 aa23.54■■□□□ 1.36
ATL3-202ENST00000535789 POLR3AO14802 1390 aaPredicted RBP23.53■■□□□ 1.36
ATL3-202ENST00000535789 SLIT2O94813 1529 aa23.53■■□□□ 1.36
ATL3-202ENST00000535789 CDK12Q9NYV4 1490 aaPredicted RBP23.52■■□□□ 1.36
ATL3-202ENST00000535789 RGS12O14924 1447 aa23.51■■□□□ 1.35
ATL3-202ENST00000535789 PSME1Q06323 249 aa23.51■■□□□ 1.35
ATL3-202ENST00000535789 CABLES1Q8TDN4 633 aa23.51■■□□□ 1.35
ATL3-202ENST00000535789 NRKQ7Z2Y5 1582 aa23.51■■□□□ 1.35
ATL3-202ENST00000535789 ARHGEF10O15013 1369 aa23.51■■□□□ 1.35
ATL3-202ENST00000535789 ATRNO75882 1429 aa23.5■■□□□ 1.35
ATL3-202ENST00000535789 PPIP5K1Q6PFW1 1433 aa23.5■■□□□ 1.35
ATL3-202ENST00000535789 GLI3P10071 1580 aa23.49■■□□□ 1.35
ATL3-202ENST00000535789 FNBP4Q8N3X1 1017 aaPredicted RBP23.49■■□□□ 1.35
ATL3-202ENST00000535789 MON2Q7Z3U7 1717 aa23.48■■□□□ 1.35
ATL3-202ENST00000535789 NGLY1Q96IV0 654 aa23.48■■□□□ 1.35
ATL3-202ENST00000535789 CABP2Q9NPB3 220 aa23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms