RNA–Protein interactions for RNA: ENST00000535709.5

GYPA-211, Transcript of glycophorin A (MNS blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPA, Length 695 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-211ENST00000535709 SPSB2Q99619 263 aa6.94□□□□□ -1.3
GYPA-211ENST00000535709 ARID3AQ99856 593 aa6.94□□□□□ -1.3
GYPA-211ENST00000535709 GPCPD1Q9NPB8 672 aa6.94□□□□□ -1.3
GYPA-211ENST00000535709 NRG2O14511 850 aaPredicted RBP6.93□□□□□ -1.3
GYPA-211ENST00000535709 USP46P62068 366 aa6.93□□□□□ -1.3
GYPA-211ENST00000535709 MDM2Q00987 491 aaPredicted RBP6.93□□□□□ -1.3
GYPA-211ENST00000535709 THAP11Q96EK4 314 aa6.93□□□□□ -1.3
GYPA-211ENST00000535709 FMNL1O95466 1100 aaPredicted RBP6.92□□□□□ -1.3
GYPA-211ENST00000535709 Q3C1V9 767 aa6.91□□□□□ -1.3
GYPA-211ENST00000535709 MSS51Q4VC12 460 aa6.91□□□□□ -1.3
GYPA-211ENST00000535709 Q6ZNB5 142 aa6.91□□□□□ -1.3
GYPA-211ENST00000535709 C1orf115Q9H7X2 142 aa6.91□□□□□ -1.3
GYPA-211ENST00000535709 SLC27A5Q9Y2P5 690 aa6.91□□□□□ -1.3
GYPA-211ENST00000535709 GFRA3O60609 400 aa6.9□□□□□ -1.3
GYPA-211ENST00000535709 KDM4AO75164 1064 aa6.9□□□□□ -1.3
GYPA-211ENST00000535709 SLC19A1P41440 591 aa6.9□□□□□ -1.3
GYPA-211ENST00000535709 BRICD5Q6PL45 260 aa6.9□□□□□ -1.3
GYPA-211ENST00000535709 FAM217BQ9NTX9 383 aaPredicted RBP6.9□□□□□ -1.3
GYPA-211ENST00000535709 SPRYD7Q5W111 196 aa6.89□□□□□ -1.31
GYPA-211ENST00000535709 ZNF598Q86UK7 904 aaKnown RBP6.89□□□□□ -1.31
GYPA-211ENST00000535709 CHMP4AQ9BY43 222 aa6.89□□□□□ -1.31
GYPA-211ENST00000535709 DCAF1Q9Y4B6 1507 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 PRR20EP86478 221 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 PRR20CP86479 221 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 PRR20DP86480 221 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 PRR20BP86481 221 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 PRR20AP86496 221 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 AMHR2Q16671 573 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 KCTD17Q8N5Z5 321 aa6.88□□□□□ -1.31
GYPA-211ENST00000535709 KRI1Q8N9T8 703 aaKnown RBP6.88□□□□□ -1.31
GYPA-211ENST00000535709 EMID1Q96A84 441 aaPredicted RBP6.88□□□□□ -1.31
GYPA-211ENST00000535709 PPEF1O14829 653 aaPredicted RBP6.87□□□□□ -1.31
GYPA-211ENST00000535709 HOXA2O43364 376 aa6.87□□□□□ -1.31
GYPA-211ENST00000535709 AK7Q96M32 723 aa6.87□□□□□ -1.31
GYPA-211ENST00000535709 PDZRN3Q9UPQ7 1066 aa6.87□□□□□ -1.31
GYPA-211ENST00000535709 RPIAP49247 311 aa6.86□□□□□ -1.31
GYPA-211ENST00000535709 RNF19BQ6ZMZ0 732 aa6.86□□□□□ -1.31
GYPA-211ENST00000535709 LIAT1Q6ZQX7 453 aa6.86□□□□□ -1.31
GYPA-211ENST00000535709 FAM160A2Q8N612 972 aaPredicted RBP6.86□□□□□ -1.31
GYPA-211ENST00000535709 ZNF697Q5TEC3 545 aa6.85□□□□□ -1.31
GYPA-211ENST00000535709 RGS22Q8NE09 1264 aa6.85□□□□□ -1.31
GYPA-211ENST00000535709 FCF1Q9Y324 198 aaKnown RBP6.85□□□□□ -1.31
GYPA-211ENST00000535709 TRIM66O15016 1216 aa6.84□□□□□ -1.31
GYPA-211ENST00000535709 RAD21O60216 631 aa6.84□□□□□ -1.31
GYPA-211ENST00000535709 MMP16P51512 607 aa6.84□□□□□ -1.31
GYPA-211ENST00000535709 PLA2G2CQ5R387 149 aa6.84□□□□□ -1.31
GYPA-211ENST00000535709 TRIM67Q6ZTA4 783 aa6.84□□□□□ -1.31
GYPA-211ENST00000535709 PRDM9Q9NQV7 894 aa6.84□□□□□ -1.31
GYPA-211ENST00000535709 TTLL12Q14166 644 aaPredicted RBP6.83□□□□□ -1.32
GYPA-211ENST00000535709 NUTM1Q86Y26 1132 aa6.83□□□□□ -1.32
GYPA-211ENST00000535709 USB1Q9BQ65 265 aaKnown RBP6.83□□□□□ -1.32
GYPA-211ENST00000535709 DXOO77932 396 aaKnown RBP6.82□□□□□ -1.32
GYPA-211ENST00000535709 SSTR3P32745 418 aaPredicted RBP6.82□□□□□ -1.32
GYPA-211ENST00000535709 TRAF7Q6Q0C0 670 aa6.82□□□□□ -1.32
GYPA-211ENST00000535709 GIGYF2Q6Y7W6 1299 aaKnown RBP6.82□□□□□ -1.32
GYPA-211ENST00000535709 REPIN1Q9BWE0 567 aaKnown RBP6.82□□□□□ -1.32
GYPA-211ENST00000535709 TRAIPQ9BWF2 469 aa6.82□□□□□ -1.32
GYPA-211ENST00000535709 MYO15BQ96JP2 1530 aa6.81□□□□□ -1.32
GYPA-211ENST00000535709 APBB1O00213 710 aa6.81□□□□□ -1.32
GYPA-211ENST00000535709 GDF9O60383 454 aa6.81□□□□□ -1.32
GYPA-211ENST00000535709 GPBP1L1Q9HC44 474 aaPredicted RBP6.81□□□□□ -1.32
GYPA-211ENST00000535709 NACADO15069 1562 aa6.8□□□□□ -1.32
GYPA-211ENST00000535709 PDE4DQ08499 809 aa6.8□□□□□ -1.32
GYPA-211ENST00000535709 DIXDC1Q155Q3 683 aa6.8□□□□□ -1.32
GYPA-211ENST00000535709 HLA-CQ95604 372 aa6.8□□□□□ -1.32
GYPA-211ENST00000535709 LCE2BO14633 110 aa6.79□□□□□ -1.32
GYPA-211ENST00000535709 ZBTB24O43167 697 aaPredicted RBP6.79□□□□□ -1.32
GYPA-211ENST00000535709 DGAT1O75907 488 aa6.79□□□□□ -1.32
GYPA-211ENST00000535709 CD2BP2O95400 341 aaKnown RBP6.79□□□□□ -1.32
GYPA-211ENST00000535709 FDX1P10109 184 aa6.79□□□□□ -1.32
GYPA-211ENST00000535709 RETREG3Q86VR2 466 aa6.79□□□□□ -1.32
GYPA-211ENST00000535709 PARP9Q8IXQ6 854 aa6.79□□□□□ -1.32
GYPA-211ENST00000535709 JUNDP17535 347 aa6.78□□□□□ -1.32
GYPA-211ENST00000535709 BRD2P25440 801 aaKnown RBP6.78□□□□□ -1.32
GYPA-211ENST00000535709 GJA5P36382 358 aa6.78□□□□□ -1.32
GYPA-211ENST00000535709 PKDCCQ504Y2 493 aa6.78□□□□□ -1.32
GYPA-211ENST00000535709 SPIRE2Q8WWL2 714 aa6.78□□□□□ -1.32
GYPA-211ENST00000535709 UNC13AQ9UPW8 1703 aa6.77□□□□□ -1.33
GYPA-211ENST00000535709 GUCA2AQ02747 115 aa6.77□□□□□ -1.33
GYPA-211ENST00000535709 TMCO4Q5TGY1 634 aa6.77□□□□□ -1.33
GYPA-211ENST00000535709 KDM4CQ9H3R0 1056 aa6.77□□□□□ -1.33
GYPA-211ENST00000535709 PKD2L1Q9P0L9 805 aa6.77□□□□□ -1.33
GYPA-211ENST00000535709 TNFRSF10AO00220 468 aa6.76□□□□□ -1.33
GYPA-211ENST00000535709 TRIM32Q13049 653 aa6.76□□□□□ -1.33
GYPA-211ENST00000535709 RB1CC1Q8TDY2 1594 aa6.76□□□□□ -1.33
GYPA-211ENST00000535709 SPDYE5A6NIY4 337 aa6.75□□□□□ -1.33
GYPA-211ENST00000535709 ARID3CA6NKF2 412 aa6.75□□□□□ -1.33
GYPA-211ENST00000535709 BEGAINQ9BUH8 593 aa6.75□□□□□ -1.33
GYPA-211ENST00000535709 MTMR7Q9Y216 660 aa6.75□□□□□ -1.33
GYPA-211ENST00000535709 FAM187AA6NFU0 413 aa6.74□□□□□ -1.33
GYPA-211ENST00000535709 MOXD2PA6NHM9 499 aa6.74□□□□□ -1.33
GYPA-211ENST00000535709 WNT7AO00755 349 aa6.74□□□□□ -1.33
GYPA-211ENST00000535709 PCDHGC3Q9UN70 934 aa6.74□□□□□ -1.33
GYPA-211ENST00000535709 C6orf229H3BNL8 230 aa6.73□□□□□ -1.33
GYPA-211ENST00000535709 MS4A1P11836 297 aa6.73□□□□□ -1.33
GYPA-211ENST00000535709 RBM25P49756 843 aaKnown RBP6.73□□□□□ -1.33
GYPA-211ENST00000535709 FOXC1Q12948 553 aa6.73□□□□□ -1.33
GYPA-211ENST00000535709 MTMR2Q13614 643 aa6.73□□□□□ -1.33
GYPA-211ENST00000535709 DESI1Q6ICB0 168 aa6.73□□□□□ -1.33
GYPA-211ENST00000535709 UBE2Q2Q8WVN8 375 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms