RNA–Protein interactions for RNA: ENST00000535685.1

CCDC60-202, Transcript of coiled-coil domain containing 60, humanhuman

TSL 3

Gene CCDC60, Length 446 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-202ENST00000535685 ROBO2Q9HCK4 1378 aa15.99■□□□□ 0.15
CCDC60-202ENST00000535685 TECPR2O15040 1411 aa15.98■□□□□ 0.15
CCDC60-202ENST00000535685 PIK3C2GO75747 1445 aa15.98■□□□□ 0.15
CCDC60-202ENST00000535685 RGS17Q9UGC6 210 aaPredicted RBP15.98■□□□□ 0.15
CCDC60-202ENST00000535685 ASXL1Q8IXJ9 1541 aa15.98■□□□□ 0.15
CCDC60-202ENST00000535685 KNDC1Q76NI1 1749 aa15.97■□□□□ 0.15
CCDC60-202ENST00000535685 RGL3Q3MIN7 710 aa15.97■□□□□ 0.15
CCDC60-202ENST00000535685 LAMC1P11047 1609 aa15.97■□□□□ 0.15
CCDC60-202ENST00000535685 NRXN1Q9ULB1 1477 aa15.97■□□□□ 0.15
CCDC60-202ENST00000535685 SPATA31A6Q5VVP1 1343 aa15.96■□□□□ 0.15
CCDC60-202ENST00000535685 LRPPRCP42704 1394 aaKnown RBP15.95■□□□□ 0.14
CCDC60-202ENST00000535685 ABCC11Q96J66 1382 aa15.95■□□□□ 0.14
CCDC60-202ENST00000535685 MYOM2P54296 1465 aa15.95■□□□□ 0.14
CCDC60-202ENST00000535685 C1orf167Q5SNV9 1468 aa15.94■□□□□ 0.14
CCDC60-202ENST00000535685 SIRT1Q96EB6 747 aa15.93■□□□□ 0.14
CCDC60-202ENST00000535685 C14orf93Q9H972 538 aaKnown RBP15.93■□□□□ 0.14
CCDC60-202ENST00000535685 ZNF219Q9P2Y4 722 aaPredicted RBP15.93■□□□□ 0.14
CCDC60-202ENST00000535685 CDC42BPGQ6DT37 1551 aa15.92■□□□□ 0.14
CCDC60-202ENST00000535685 STAC3Q96MF2 364 aa15.91■□□□□ 0.14
CCDC60-202ENST00000535685 LRRC59Q96AG4 307 aaKnown RBP15.9■□□□□ 0.14
CCDC60-202ENST00000535685 YTHDC2Q9H6S0 1430 aaKnown RBP15.89■□□□□ 0.13
CCDC60-202ENST00000535685 LRP6O75581 1613 aa15.89■□□□□ 0.13
CCDC60-202ENST00000535685 POTEAQ6S8J7 498 aa15.87■□□□□ 0.13
CCDC60-202ENST00000535685 SOS2Q07890 1332 aaPredicted RBP15.87■□□□□ 0.13
CCDC60-202ENST00000535685 TMEM132EQ6IEE7 984 aa15.86■□□□□ 0.13
CCDC60-202ENST00000535685 DHX57Q6P158 1386 aaKnown RBP15.86■□□□□ 0.13
CCDC60-202ENST00000535685 WAPLQ7Z5K2 1190 aa15.85■□□□□ 0.13
CCDC60-202ENST00000535685 STK26Q9P289 416 aa15.85■□□□□ 0.13
CCDC60-202ENST00000535685 DLC1Q96QB1 1528 aa15.84■□□□□ 0.13
CCDC60-202ENST00000535685 CFAP70Q5T0N1 1121 aa15.84■□□□□ 0.13
CCDC60-202ENST00000535685 ORAI2Q96SN7 254 aa15.84■□□□□ 0.13
CCDC60-202ENST00000535685 FMN2Q9NZ56 1722 aa15.84■□□□□ 0.13
CCDC60-202ENST00000535685 PNPLA6Q8IY17 1366 aa15.84■□□□□ 0.13
CCDC60-202ENST00000535685 PLEKHH1Q9ULM0 1364 aa15.83■□□□□ 0.12
CCDC60-202ENST00000535685 ADGRB1O14514 1584 aa15.83■□□□□ 0.12
CCDC60-202ENST00000535685 ZNF772Q68DY9 489 aaPredicted RBP15.82■□□□□ 0.12
CCDC60-202ENST00000535685 DDX17Q92841 729 aaKnown RBP15.82■□□□□ 0.12
CCDC60-202ENST00000535685 NPHP3Q7Z494 1330 aa15.81■□□□□ 0.12
CCDC60-202ENST00000535685 COL22A1Q8NFW1 1626 aaPredicted RBP15.8■□□□□ 0.12
CCDC60-202ENST00000535685 MEX3CQ5U5Q3 659 aaKnown RBP15.8■□□□□ 0.12
CCDC60-202ENST00000535685 KIF1AQ12756 1690 aa15.79■□□□□ 0.12
CCDC60-202ENST00000535685 ESCO1Q5FWF5 840 aa15.79■□□□□ 0.12
CCDC60-202ENST00000535685 AMER1Q5JTC6 1135 aaPredicted RBP15.79■□□□□ 0.12
CCDC60-202ENST00000535685 PXDNQ92626 1479 aa15.78■□□□□ 0.12
CCDC60-202ENST00000535685 RGPD8O14715 1765 aaPredicted RBP15.78■□□□□ 0.12
CCDC60-202ENST00000535685 DCAF11Q8TEB1 546 aa15.78■□□□□ 0.12
CCDC60-202ENST00000535685 RTN4Q9NQC3 1192 aaKnown RBP15.77■□□□□ 0.12
CCDC60-202ENST00000535685 ADGRB2O60241 1585 aa15.77■□□□□ 0.11
CCDC60-202ENST00000535685 NUTM2BA6NNL0 878 aaPredicted RBP15.76■□□□□ 0.11
CCDC60-202ENST00000535685 NUTM2EB1AL46 878 aaPredicted RBP15.76■□□□□ 0.11
CCDC60-202ENST00000535685 NUTM2AQ8IVF1 878 aaPredicted RBP15.76■□□□□ 0.11
CCDC60-202ENST00000535685 KIAA1210Q9ULL0 1709 aa15.76■□□□□ 0.11
CCDC60-202ENST00000535685 PRAM1Q96QH2 718 aa15.75■□□□□ 0.11
CCDC60-202ENST00000535685 CDK12Q9NYV4 1490 aaPredicted RBP15.74■□□□□ 0.11
CCDC60-202ENST00000535685 FOXO3O43524 673 aa15.74■□□□□ 0.11
CCDC60-202ENST00000535685 KDM2AQ9Y2K7 1162 aa15.74■□□□□ 0.11
CCDC60-202ENST00000535685 ANKARQ7Z5J8 1434 aa15.74■□□□□ 0.11
CCDC60-202ENST00000535685 MARF1Q9Y4F3 1742 aaKnown RBP15.74■□□□□ 0.11
CCDC60-202ENST00000535685 AFF2P51816 1311 aa15.73■□□□□ 0.11
CCDC60-202ENST00000535685 POGKQ9P215 609 aa15.72■□□□□ 0.11
CCDC60-202ENST00000535685 ARHGEF28Q8N1W1 1705 aaKnown RBP15.71■□□□□ 0.11
CCDC60-202ENST00000535685 RNF39Q9H2S5 420 aa15.71■□□□□ 0.11
CCDC60-202ENST00000535685 USP32Q8NFA0 1604 aa15.71■□□□□ 0.11
CCDC60-202ENST00000535685 NUTM2FA1L443 756 aa15.7■□□□□ 0.1
CCDC60-202ENST00000535685 RXRBP28702 533 aa15.7■□□□□ 0.1
CCDC60-202ENST00000535685 PHF8Q9UPP1 1060 aa15.7■□□□□ 0.1
CCDC60-202ENST00000535685 TRAK1Q9UPV9 953 aa15.7■□□□□ 0.1
CCDC60-202ENST00000535685 EIF3AQ14152 1382 aaKnown RBP15.7■□□□□ 0.1
CCDC60-202ENST00000535685 SPATA31A3Q5VYP0 1347 aa15.69■□□□□ 0.1
CCDC60-202ENST00000535685 FNBP4Q8N3X1 1017 aaPredicted RBP15.69■□□□□ 0.1
CCDC60-202ENST00000535685 C8orf37Q96NL8 207 aa15.69■□□□□ 0.1
CCDC60-202ENST00000535685 SBNO1A3KN83 1393 aa15.68■□□□□ 0.1
CCDC60-202ENST00000535685 KRT28Q7Z3Y7 464 aa15.68■□□□□ 0.1
CCDC60-202ENST00000535685 RBM6P78332 1123 aaKnown RBP15.67■□□□□ 0.1
CCDC60-202ENST00000535685 PSME1Q06323 249 aa15.67■□□□□ 0.1
CCDC60-202ENST00000535685 SAFB2Q14151 953 aaKnown RBP eCLIP15.67■□□□□ 0.1
CCDC60-202ENST00000535685 NGLY1Q96IV0 654 aa15.67■□□□□ 0.1
CCDC60-202ENST00000535685 SPINK5Q9NQ38 1064 aaPredicted RBP15.67■□□□□ 0.1
CCDC60-202ENST00000535685 TULP4Q9NRJ4 1543 aa15.67■□□□□ 0.1
CCDC60-202ENST00000535685 WASLO00401 505 aaPredicted RBP15.66■□□□□ 0.1
CCDC60-202ENST00000535685 ADAMTS2O95450 1211 aa15.66■□□□□ 0.1
CCDC60-202ENST00000535685 XPCQ01831 940 aaPredicted RBP15.66■□□□□ 0.1
CCDC60-202ENST00000535685 QTRT2Q9H974 415 aaKnown RBP15.66■□□□□ 0.1
CCDC60-202ENST00000535685 TNS3Q68CZ2 1445 aa15.65■□□□□ 0.1
CCDC60-202ENST00000535685 ITSN1Q15811 1721 aa15.64■□□□□ 0.09
CCDC60-202ENST00000535685 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.64■□□□□ 0.09
CCDC60-202ENST00000535685 TRPM3Q9HCF6 1732 aaPredicted RBP15.64■□□□□ 0.09
CCDC60-202ENST00000535685 ATRNO75882 1429 aa15.63■□□□□ 0.09
CCDC60-202ENST00000535685 USP21Q9UK80 565 aa15.63■□□□□ 0.09
CCDC60-202ENST00000535685 TRPC5Q9UL62 973 aaPredicted RBP15.63■□□□□ 0.09
CCDC60-202ENST00000535685 MINK1Q8N4C8 1332 aaPredicted RBP15.63■□□□□ 0.09
CCDC60-202ENST00000535685 PRR36Q9H6K5 1346 aa15.63■□□□□ 0.09
CCDC60-202ENST00000535685 ARHGEF10O15013 1369 aa15.62■□□□□ 0.09
CCDC60-202ENST00000535685 BCL9LQ86UU0 1499 aa15.62■□□□□ 0.09
CCDC60-202ENST00000535685 ALS2Q96Q42 1657 aa15.61■□□□□ 0.09
CCDC60-202ENST00000535685 ABCA3Q99758 1704 aa15.61■□□□□ 0.09
CCDC60-202ENST00000535685 HIRIP3Q9BW71 556 aaPredicted RBP15.61■□□□□ 0.09
CCDC60-202ENST00000535685 SLIT2O94813 1529 aa15.6■□□□□ 0.09
CCDC60-202ENST00000535685 RGS12O14924 1447 aa15.6■□□□□ 0.09
CCDC60-202ENST00000535685 ATP7BP35670 1465 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms