RNA–Protein interactions for RNA: ENST00000535504.1

SSPN-204, Transcript of sarcospan, humanhuman

TSL 1 (best) BASIC

Gene SSPN, Length 419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-204ENST00000535504 MST1RQ04912 1400 aa31.3■■■□□ 2.6
SSPN-204ENST00000535504 CDC42BPGQ6DT37 1551 aa31.28■■■□□ 2.6
SSPN-204ENST00000535504 CLSPNQ9HAW4 1339 aa31.27■■■□□ 2.6
SSPN-204ENST00000535504 SAFB2Q14151 953 aaKnown RBP eCLIP31.27■■■□□ 2.6
SSPN-204ENST00000535504 PLEKHH1Q9ULM0 1364 aa31.27■■■□□ 2.6
SSPN-204ENST00000535504 BRINP3Q76B58 766 aa31.24■■■□□ 2.59
SSPN-204ENST00000535504 PHLPP1O60346 1717 aa31.23■■■□□ 2.59
SSPN-204ENST00000535504 C1orf167Q5SNV9 1468 aa31.22■■■□□ 2.59
SSPN-204ENST00000535504 CCER1Q8TC90 406 aaPredicted RBP31.21■■■□□ 2.59
SSPN-204ENST00000535504 ROCK2O75116 1388 aaKnown RBP31.19■■■□□ 2.58
SSPN-204ENST00000535504 NBPF1Q3BBV0 1214 aa31.18■■■□□ 2.58
SSPN-204ENST00000535504 EIF3AQ14152 1382 aaKnown RBP31.17■■■□□ 2.58
SSPN-204ENST00000535504 ESCO1Q5FWF5 840 aa31.17■■■□□ 2.58
SSPN-204ENST00000535504 AHDC1Q5TGY3 1603 aaPredicted RBP31.16■■■□□ 2.58
SSPN-204ENST00000535504 NUTM2FA1L443 756 aa31.15■■■□□ 2.58
SSPN-204ENST00000535504 MINK1Q8N4C8 1332 aaPredicted RBP31.15■■■□□ 2.58
SSPN-204ENST00000535504 ARHGEF28Q8N1W1 1705 aaKnown RBP31.15■■■□□ 2.58
SSPN-204ENST00000535504 TRPM1Q7Z4N2 1603 aa31.14■■■□□ 2.58
SSPN-204ENST00000535504 FMN2Q9NZ56 1722 aa31.12■■■□□ 2.57
SSPN-204ENST00000535504 ORAI2Q96SN7 254 aa31.11■■■□□ 2.57
SSPN-204ENST00000535504 HIRIP3Q9BW71 556 aaPredicted RBP31.11■■■□□ 2.57
SSPN-204ENST00000535504 ADGRB2O60241 1585 aa31.1■■■□□ 2.57
SSPN-204ENST00000535504 JCADQ9P266 1359 aa31.1■■■□□ 2.57
SSPN-204ENST00000535504 TIMELESSQ9UNS1 1208 aa31.1■■■□□ 2.57
SSPN-204ENST00000535504 NPHP3Q7Z494 1330 aa31.08■■■□□ 2.57
SSPN-204ENST00000535504 CENPJQ9HC77 1338 aaPredicted RBP31.08■■■□□ 2.57
SSPN-204ENST00000535504 NHSL1Q5SYE7 1610 aa31.07■■■□□ 2.56
SSPN-204ENST00000535504 LRRC59Q96AG4 307 aaKnown RBP31.07■■■□□ 2.56
SSPN-204ENST00000535504 COL16A1Q07092 1604 aaPredicted RBP31.06■■■□□ 2.56
SSPN-204ENST00000535504 WASLO00401 505 aaPredicted RBP31.06■■■□□ 2.56
SSPN-204ENST00000535504 ANKARQ7Z5J8 1434 aa31.06■■■□□ 2.56
SSPN-204ENST00000535504 NBPF8Q3BBV2 869 aa31.05■■■□□ 2.56
SSPN-204ENST00000535504 CARD11Q9BXL7 1154 aa31.05■■■□□ 2.56
SSPN-204ENST00000535504 DISP3Q9P2K9 1392 aa31.05■■■□□ 2.56
SSPN-204ENST00000535504 KIF1AQ12756 1690 aa31.03■■■□□ 2.56
SSPN-204ENST00000535504 PHF23Q9BUL5 403 aaPredicted RBP31.02■■■□□ 2.56
SSPN-204ENST00000535504 RALGAPBQ86X10 1494 aa31.01■■■□□ 2.56
SSPN-204ENST00000535504 PHF8Q9UPP1 1060 aa31.01■■■□□ 2.55
SSPN-204ENST00000535504 TULP4Q9NRJ4 1543 aa30.99■■■□□ 2.55
SSPN-204ENST00000535504 FOXO3O43524 673 aa30.99■■■□□ 2.55
SSPN-204ENST00000535504 DDX17Q92841 729 aaKnown RBP30.99■■■□□ 2.55
SSPN-204ENST00000535504 GPRASP1Q5JY77 1395 aa30.99■■■□□ 2.55
SSPN-204ENST00000535504 MED1Q15648 1581 aaPredicted RBP30.99■■■□□ 2.55
SSPN-204ENST00000535504 SPATA31A6Q5VVP1 1343 aa30.98■■■□□ 2.55
SSPN-204ENST00000535504 QRICH2Q9H0J4 1663 aa30.96■■■□□ 2.55
SSPN-204ENST00000535504 SOS2Q07890 1332 aaPredicted RBP30.96■■■□□ 2.55
SSPN-204ENST00000535504 PSME1Q06323 249 aa30.95■■■□□ 2.55
SSPN-204ENST00000535504 CDK19Q9BWU1 502 aa30.95■■■□□ 2.55
SSPN-204ENST00000535504 SHPRHQ149N8 1683 aa30.94■■■□□ 2.54
SSPN-204ENST00000535504 SRPK2P78362 688 aaKnown RBP30.94■■■□□ 2.54
SSPN-204ENST00000535504 RGPD8O14715 1765 aaPredicted RBP30.93■■■□□ 2.54
SSPN-204ENST00000535504 MEX3CQ5U5Q3 659 aaKnown RBP30.93■■■□□ 2.54
SSPN-204ENST00000535504 EVC2Q86UK5 1308 aa30.92■■■□□ 2.54
SSPN-204ENST00000535504 ITSN1Q15811 1721 aa30.91■■■□□ 2.54
SSPN-204ENST00000535504 PMFBP1Q8TBY8 1022 aa30.9■■■□□ 2.54
SSPN-204ENST00000535504 NUDT16Q96DE0 195 aaKnown RBP30.9■■■□□ 2.54
SSPN-204ENST00000535504 XPCQ01831 940 aaPredicted RBP30.89■■■□□ 2.54
SSPN-204ENST00000535504 NGDNQ8NEJ9 315 aaKnown RBP30.89■■■□□ 2.54
SSPN-204ENST00000535504 KRT28Q7Z3Y7 464 aa30.88■■■□□ 2.53
SSPN-204ENST00000535504 USP32Q8NFA0 1604 aa30.87■■■□□ 2.53
SSPN-204ENST00000535504 NUTM2BA6NNL0 878 aaPredicted RBP30.86■■■□□ 2.53
SSPN-204ENST00000535504 NUTM2EB1AL46 878 aaPredicted RBP30.86■■■□□ 2.53
SSPN-204ENST00000535504 NUTM2AQ8IVF1 878 aaPredicted RBP30.86■■■□□ 2.53
SSPN-204ENST00000535504 CCDC61Q9Y6R9 512 aa30.86■■■□□ 2.53
SSPN-204ENST00000535504 PXDNQ92626 1479 aa30.85■■■□□ 2.53
SSPN-204ENST00000535504 PNPLA6Q8IY17 1366 aa30.85■■■□□ 2.53
SSPN-204ENST00000535504 PRR36Q9H6K5 1346 aa30.85■■■□□ 2.53
SSPN-204ENST00000535504 ATP7BP35670 1465 aa30.84■■■□□ 2.53
SSPN-204ENST00000535504 SLC24A1O60721 1099 aa30.84■■■□□ 2.53
SSPN-204ENST00000535504 CABP2Q9NPB3 220 aa30.81■■■□□ 2.52
SSPN-204ENST00000535504 LMOD2Q6P5Q4 547 aa30.8■■■□□ 2.52
SSPN-204ENST00000535504 SBNO2Q9Y2G9 1366 aa30.79■■■□□ 2.52
SSPN-204ENST00000535504 SBNO1A3KN83 1393 aa30.78■■■□□ 2.52
SSPN-204ENST00000535504 SPATA31A3Q5VYP0 1347 aa30.77■■■□□ 2.52
SSPN-204ENST00000535504 HAP1P54257 671 aaPredicted RBP30.77■■■□□ 2.52
SSPN-204ENST00000535504 TNS3Q68CZ2 1445 aa30.77■■■□□ 2.52
SSPN-204ENST00000535504 ARHGEF10O15013 1369 aa30.77■■■□□ 2.52
SSPN-204ENST00000535504 PPIP5K1Q6PFW1 1433 aa30.75■■■□□ 2.51
SSPN-204ENST00000535504 ATAD2Q6PL18 1390 aa30.75■■■□□ 2.51
SSPN-204ENST00000535504 PAK3O75914 559 aaPredicted RBP30.74■■■□□ 2.51
SSPN-204ENST00000535504 PLEKHG3A1L390 1219 aa30.73■■■□□ 2.51
SSPN-204ENST00000535504 TOPAZ1Q8N9V7 1692 aa30.73■■■□□ 2.51
SSPN-204ENST00000535504 USP47Q96K76 1375 aa30.72■■■□□ 2.51
SSPN-204ENST00000535504 LRP6O75581 1613 aa30.72■■■□□ 2.51
SSPN-204ENST00000535504 COL22A1Q8NFW1 1626 aaPredicted RBP30.72■■■□□ 2.51
SSPN-204ENST00000535504 ACEP12821 1306 aa30.72■■■□□ 2.51
SSPN-204ENST00000535504 ST20-MTHFSA0A0A6YYL1 179 aa30.7■■■□□ 2.51
SSPN-204ENST00000535504 ADAMTS2O95450 1211 aa30.69■■■□□ 2.5
SSPN-204ENST00000535504 POLR3AO14802 1390 aaPredicted RBP30.68■■■□□ 2.5
SSPN-204ENST00000535504 ZNF772Q68DY9 489 aaPredicted RBP30.68■■■□□ 2.5
SSPN-204ENST00000535504 C8orf37Q96NL8 207 aa30.67■■■□□ 2.5
SSPN-204ENST00000535504 CABP1Q9NZU7 370 aa30.67■■■□□ 2.5
SSPN-204ENST00000535504 TMF1P82094 1093 aa30.64■■■□□ 2.5
SSPN-204ENST00000535504 NGLY1Q96IV0 654 aa30.64■■■□□ 2.5
SSPN-204ENST00000535504 PLEKHG5O94827 1062 aa30.63■■■□□ 2.49
SSPN-204ENST00000535504 BRD4O60885 1362 aaPredicted RBP30.63■■■□□ 2.49
SSPN-204ENST00000535504 CDCA8Q53HL2 280 aa30.62■■■□□ 2.49
SSPN-204ENST00000535504 TRPM3Q9HCF6 1732 aaPredicted RBP30.61■■■□□ 2.49
SSPN-204ENST00000535504 TMC1Q8TDI8 760 aa30.61■■■□□ 2.49
SSPN-204ENST00000535504 PUS7Q96PZ0 661 aaKnown RBP30.61■■■□□ 2.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms