RNA–Protein interactions for RNA: ENST00000535239.5

MSRB3-205, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 3

Gene MSRB3, Length 630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-205ENST00000535239 SPATA31A6Q5VVP1 1343 aa22.32■■□□□ 1.16
MSRB3-205ENST00000535239 PHF23Q9BUL5 403 aaPredicted RBP22.32■■□□□ 1.16
MSRB3-205ENST00000535239 KDM2AQ9Y2K7 1162 aa22.32■■□□□ 1.16
MSRB3-205ENST00000535239 PLEKHH1Q9ULM0 1364 aa22.32■■□□□ 1.16
MSRB3-205ENST00000535239 DLC1Q96QB1 1528 aa22.31■■□□□ 1.16
MSRB3-205ENST00000535239 SHPRHQ149N8 1683 aa22.31■■□□□ 1.16
MSRB3-205ENST00000535239 ORAI2Q96SN7 254 aa22.3■■□□□ 1.16
MSRB3-205ENST00000535239 LRRC59Q96AG4 307 aaKnown RBP22.29■■□□□ 1.16
MSRB3-205ENST00000535239 RGS17Q9UGC6 210 aaPredicted RBP22.29■■□□□ 1.16
MSRB3-205ENST00000535239 SOCS7O14512 581 aa22.27■■□□□ 1.16
MSRB3-205ENST00000535239 SOS2Q07890 1332 aaPredicted RBP22.27■■□□□ 1.16
MSRB3-205ENST00000535239 PRAM1Q96QH2 718 aa22.25■■□□□ 1.15
MSRB3-205ENST00000535239 DDX17Q92841 729 aaKnown RBP22.24■■□□□ 1.15
MSRB3-205ENST00000535239 FMN2Q9NZ56 1722 aa22.23■■□□□ 1.15
MSRB3-205ENST00000535239 LRP6O75581 1613 aa22.22■■□□□ 1.15
MSRB3-205ENST00000535239 ESCO1Q5FWF5 840 aa22.22■■□□□ 1.15
MSRB3-205ENST00000535239 KIAA1210Q9ULL0 1709 aa22.21■■□□□ 1.15
MSRB3-205ENST00000535239 TRIM26Q12899 539 aaPredicted RBP22.21■■□□□ 1.15
MSRB3-205ENST00000535239 POGKQ9P215 609 aa22.2■■□□□ 1.14
MSRB3-205ENST00000535239 TRAK1Q9UPV9 953 aa22.2■■□□□ 1.14
MSRB3-205ENST00000535239 NPHP3Q7Z494 1330 aa22.2■■□□□ 1.14
MSRB3-205ENST00000535239 PNPLA6Q8IY17 1366 aa22.2■■□□□ 1.14
MSRB3-205ENST00000535239 ADGRB2O60241 1585 aa22.19■■□□□ 1.14
MSRB3-205ENST00000535239 PXDNQ92626 1479 aa22.16■■□□□ 1.14
MSRB3-205ENST00000535239 NUTM2FA1L443 756 aa22.15■■□□□ 1.14
MSRB3-205ENST00000535239 FOXO3O43524 673 aa22.15■■□□□ 1.14
MSRB3-205ENST00000535239 POTEAQ6S8J7 498 aa22.15■■□□□ 1.14
MSRB3-205ENST00000535239 ANKARQ7Z5J8 1434 aa22.14■■□□□ 1.14
MSRB3-205ENST00000535239 KIF1AQ12756 1690 aa22.14■■□□□ 1.14
MSRB3-205ENST00000535239 SAFB2Q14151 953 aaKnown RBP eCLIP22.14■■□□□ 1.13
MSRB3-205ENST00000535239 L3MBTL2Q969R5 705 aa22.14■■□□□ 1.13
MSRB3-205ENST00000535239 SIN3AQ96ST3 1273 aa22.14■■□□□ 1.13
MSRB3-205ENST00000535239 ARHGEF28Q8N1W1 1705 aaKnown RBP22.12■■□□□ 1.13
MSRB3-205ENST00000535239 COL22A1Q8NFW1 1626 aaPredicted RBP22.11■■□□□ 1.13
MSRB3-205ENST00000535239 MEX3CQ5U5Q3 659 aaKnown RBP22.11■■□□□ 1.13
MSRB3-205ENST00000535239 PHF8Q9UPP1 1060 aa22.11■■□□□ 1.13
MSRB3-205ENST00000535239 RGPD8O14715 1765 aaPredicted RBP22.1■■□□□ 1.13
MSRB3-205ENST00000535239 NUTM2BA6NNL0 878 aaPredicted RBP22.1■■□□□ 1.13
MSRB3-205ENST00000535239 NUTM2EB1AL46 878 aaPredicted RBP22.1■■□□□ 1.13
MSRB3-205ENST00000535239 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
MSRB3-205ENST00000535239 NUTM2AQ8IVF1 878 aaPredicted RBP22.1■■□□□ 1.13
MSRB3-205ENST00000535239 EIF3AQ14152 1382 aaKnown RBP22.1■■□□□ 1.13
MSRB3-205ENST00000535239 WASLO00401 505 aaPredicted RBP22.09■■□□□ 1.13
MSRB3-205ENST00000535239 ZNF772Q68DY9 489 aaPredicted RBP22.09■■□□□ 1.13
MSRB3-205ENST00000535239 USP32Q8NFA0 1604 aa22.09■■□□□ 1.13
MSRB3-205ENST00000535239 MINK1Q8N4C8 1332 aaPredicted RBP22.08■■□□□ 1.13
MSRB3-205ENST00000535239 SPATA31A3Q5VYP0 1347 aa22.06■■□□□ 1.12
MSRB3-205ENST00000535239 TULP4Q9NRJ4 1543 aa22.06■■□□□ 1.12
MSRB3-205ENST00000535239 KRT28Q7Z3Y7 464 aa22.06■■□□□ 1.12
MSRB3-205ENST00000535239 HIRIP3Q9BW71 556 aaPredicted RBP22.06■■□□□ 1.12
MSRB3-205ENST00000535239 NEUROD1Q13562 356 aa22.05■■□□□ 1.12
MSRB3-205ENST00000535239 PRR36Q9H6K5 1346 aa22.05■■□□□ 1.12
MSRB3-205ENST00000535239 XPCQ01831 940 aaPredicted RBP22.04■■□□□ 1.12
MSRB3-205ENST00000535239 PSME1Q06323 249 aa22.04■■□□□ 1.12
MSRB3-205ENST00000535239 SBNO1A3KN83 1393 aa22.03■■□□□ 1.12
MSRB3-205ENST00000535239 AFF2P51816 1311 aa22.02■■□□□ 1.12
MSRB3-205ENST00000535239 TRPM1Q7Z4N2 1603 aa22.01■■□□□ 1.11
MSRB3-205ENST00000535239 FNBP4Q8N3X1 1017 aaPredicted RBP21.99■■□□□ 1.11
MSRB3-205ENST00000535239 PMFBP1Q8TBY8 1022 aa21.99■■□□□ 1.11
MSRB3-205ENST00000535239 C8orf37Q96NL8 207 aa21.99■■□□□ 1.11
MSRB3-205ENST00000535239 TNS3Q68CZ2 1445 aa21.98■■□□□ 1.11
MSRB3-205ENST00000535239 ATP7BP35670 1465 aa21.98■■□□□ 1.11
MSRB3-205ENST00000535239 NUDT16Q96DE0 195 aaKnown RBP21.98■■□□□ 1.11
MSRB3-205ENST00000535239 CDK19Q9BWU1 502 aa21.98■■□□□ 1.11
MSRB3-205ENST00000535239 ADAMTS2O95450 1211 aa21.97■■□□□ 1.11
MSRB3-205ENST00000535239 NGLY1Q96IV0 654 aa21.97■■□□□ 1.11
MSRB3-205ENST00000535239 CENPJQ9HC77 1338 aaPredicted RBP21.97■■□□□ 1.11
MSRB3-205ENST00000535239 ARHGEF10O15013 1369 aa21.95■■□□□ 1.1
MSRB3-205ENST00000535239 GPRASP1Q5JY77 1395 aa21.95■■□□□ 1.1
MSRB3-205ENST00000535239 CDK12Q9NYV4 1490 aaPredicted RBP21.95■■□□□ 1.1
MSRB3-205ENST00000535239 ITSN1Q15811 1721 aa21.94■■□□□ 1.1
MSRB3-205ENST00000535239 RXRBP28702 533 aa21.94■■□□□ 1.1
MSRB3-205ENST00000535239 NBPF8Q3BBV2 869 aa21.94■■□□□ 1.1
MSRB3-205ENST00000535239 CCDC61Q9Y6R9 512 aa21.94■■□□□ 1.1
MSRB3-205ENST00000535239 TRPM3Q9HCF6 1732 aaPredicted RBP21.94■■□□□ 1.1
MSRB3-205ENST00000535239 MARF1Q9Y4F3 1742 aaKnown RBP21.94■■□□□ 1.1
MSRB3-205ENST00000535239 QTRT2Q9H974 415 aaKnown RBP21.93■■□□□ 1.1
MSRB3-205ENST00000535239 ROCK2O75116 1388 aaKnown RBP21.92■■□□□ 1.1
MSRB3-205ENST00000535239 PLEKHG3A1L390 1219 aa21.92■■□□□ 1.1
MSRB3-205ENST00000535239 POLR3AO14802 1390 aaPredicted RBP21.91■■□□□ 1.1
MSRB3-205ENST00000535239 RBM6P78332 1123 aaKnown RBP21.91■■□□□ 1.1
MSRB3-205ENST00000535239 NGDNQ8NEJ9 315 aaKnown RBP21.91■■□□□ 1.1
MSRB3-205ENST00000535239 TOPAZ1Q8N9V7 1692 aa21.91■■□□□ 1.1
MSRB3-205ENST00000535239 TONSLQ96HA7 1378 aa21.9■■□□□ 1.1
MSRB3-205ENST00000535239 USP21Q9UK80 565 aa21.9■■□□□ 1.1
MSRB3-205ENST00000535239 ALS2Q96Q42 1657 aa21.9■■□□□ 1.1
MSRB3-205ENST00000535239 QRICH2Q9H0J4 1663 aa21.88■■□□□ 1.09
MSRB3-205ENST00000535239 BCL9LQ86UU0 1499 aa21.88■■□□□ 1.09
MSRB3-205ENST00000535239 TRPC5Q9UL62 973 aaPredicted RBP21.87■■□□□ 1.09
MSRB3-205ENST00000535239 ATRNO75882 1429 aa21.87■■□□□ 1.09
MSRB3-205ENST00000535239 SLIT2O94813 1529 aa21.86■■□□□ 1.09
MSRB3-205ENST00000535239 ACEP12821 1306 aa21.85■■□□□ 1.09
MSRB3-205ENST00000535239 RALGAPBQ86X10 1494 aa21.84■■□□□ 1.09
MSRB3-205ENST00000535239 ABCA3Q99758 1704 aa21.84■■□□□ 1.09
MSRB3-205ENST00000535239 SRPK2P78362 688 aaKnown RBP21.84■■□□□ 1.09
MSRB3-205ENST00000535239 LMOD2Q6P5Q4 547 aa21.84■■□□□ 1.09
MSRB3-205ENST00000535239 CABLES1Q8TDN4 633 aa21.84■■□□□ 1.09
MSRB3-205ENST00000535239 SBNO2Q9Y2G9 1366 aa21.84■■□□□ 1.09
MSRB3-205ENST00000535239 EVC2Q86UK5 1308 aa21.83■■□□□ 1.09
MSRB3-205ENST00000535239 CABP2Q9NPB3 220 aa21.83■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms