RNA–Protein interactions for RNA: ENST00000535174.5

DDB1-205, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-205ENST00000535174 SPATA31E1Q6ZUB1 1445 aa24.69■■□□□ 1.54
DDB1-205ENST00000535174 AFF2P51816 1311 aa24.68■■□□□ 1.54
DDB1-205ENST00000535174 ANKRD30BQ9BXX2 1392 aa24.67■■□□□ 1.54
DDB1-205ENST00000535174 ADGRF5Q8IZF2 1346 aa24.67■■□□□ 1.54
DDB1-205ENST00000535174 C8orf37Q96NL8 207 aa24.66■■□□□ 1.54
DDB1-205ENST00000535174 ORAI2Q96SN7 254 aa24.66■■□□□ 1.54
DDB1-205ENST00000535174 RXRBP28702 533 aa24.65■■□□□ 1.54
DDB1-205ENST00000535174 KNDC1Q76NI1 1749 aa24.65■■□□□ 1.54
DDB1-205ENST00000535174 STK26Q9P289 416 aa24.63■■□□□ 1.53
DDB1-205ENST00000535174 TECPR2O15040 1411 aa24.61■■□□□ 1.53
DDB1-205ENST00000535174 PIK3C2GO75747 1445 aa24.61■■□□□ 1.53
DDB1-205ENST00000535174 SOS2Q07890 1332 aaPredicted RBP24.61■■□□□ 1.53
DDB1-205ENST00000535174 CDK12Q9NYV4 1490 aaPredicted RBP24.6■■□□□ 1.53
DDB1-205ENST00000535174 LRPPRCP42704 1394 aaKnown RBP24.6■■□□□ 1.53
DDB1-205ENST00000535174 ADAMTS2O95450 1211 aa24.6■■□□□ 1.53
DDB1-205ENST00000535174 ESCO1Q5FWF5 840 aa24.58■■□□□ 1.53
DDB1-205ENST00000535174 COL22A1Q8NFW1 1626 aaPredicted RBP24.57■■□□□ 1.52
DDB1-205ENST00000535174 NPHP3Q7Z494 1330 aa24.57■■□□□ 1.52
DDB1-205ENST00000535174 TMEM132EQ6IEE7 984 aa24.56■■□□□ 1.52
DDB1-205ENST00000535174 NGLY1Q96IV0 654 aa24.56■■□□□ 1.52
DDB1-205ENST00000535174 WAPLQ7Z5K2 1190 aa24.55■■□□□ 1.52
DDB1-205ENST00000535174 TIMELESSQ9UNS1 1208 aa24.55■■□□□ 1.52
DDB1-205ENST00000535174 FMN2Q9NZ56 1722 aa24.55■■□□□ 1.52
DDB1-205ENST00000535174 YTHDC2Q9H6S0 1430 aaKnown RBP24.54■■□□□ 1.52
DDB1-205ENST00000535174 NUTM2FA1L443 756 aa24.54■■□□□ 1.52
DDB1-205ENST00000535174 ABCC11Q96J66 1382 aa24.54■■□□□ 1.52
DDB1-205ENST00000535174 PLEKHH1Q9ULM0 1364 aa24.54■■□□□ 1.52
DDB1-205ENST00000535174 PXDNQ92626 1479 aa24.53■■□□□ 1.52
DDB1-205ENST00000535174 QTRT2Q9H974 415 aaKnown RBP24.53■■□□□ 1.52
DDB1-205ENST00000535174 RGS12O14924 1447 aa24.52■■□□□ 1.52
DDB1-205ENST00000535174 MYOM2P54296 1465 aa24.52■■□□□ 1.52
DDB1-205ENST00000535174 UPF1Q92900 1129 aaKnown RBP eCLIP24.52■■□□□ 1.52
DDB1-205ENST00000535174 KIF1AQ12756 1690 aa24.51■■□□□ 1.51
DDB1-205ENST00000535174 RBM6P78332 1123 aaKnown RBP24.51■■□□□ 1.51
DDB1-205ENST00000535174 XPCQ01831 940 aaPredicted RBP24.5■■□□□ 1.51
DDB1-205ENST00000535174 FOXO3O43524 673 aa24.49■■□□□ 1.51
DDB1-205ENST00000535174 NRXN1Q9ULB1 1477 aa24.48■■□□□ 1.51
DDB1-205ENST00000535174 MARF1Q9Y4F3 1742 aaKnown RBP24.48■■□□□ 1.51
DDB1-205ENST00000535174 USP21Q9UK80 565 aa24.47■■□□□ 1.51
DDB1-205ENST00000535174 CFAP70Q5T0N1 1121 aa24.44■■□□□ 1.5
DDB1-205ENST00000535174 C14orf93Q9H972 538 aaKnown RBP24.44■■□□□ 1.5
DDB1-205ENST00000535174 TRPC5Q9UL62 973 aaPredicted RBP24.43■■□□□ 1.5
DDB1-205ENST00000535174 SIN3AQ96ST3 1273 aa24.42■■□□□ 1.5
DDB1-205ENST00000535174 RGPD8O14715 1765 aaPredicted RBP24.42■■□□□ 1.5
DDB1-205ENST00000535174 SAFB2Q14151 953 aaKnown RBP eCLIP24.4■■□□□ 1.5
DDB1-205ENST00000535174 FNBP4Q8N3X1 1017 aaPredicted RBP24.4■■□□□ 1.5
DDB1-205ENST00000535174 ATRNO75882 1429 aa24.39■■□□□ 1.5
DDB1-205ENST00000535174 SIRT1Q96EB6 747 aa24.39■■□□□ 1.49
DDB1-205ENST00000535174 NEUROD1Q13562 356 aa24.38■■□□□ 1.49
DDB1-205ENST00000535174 PRAM1Q96QH2 718 aa24.38■■□□□ 1.49
DDB1-205ENST00000535174 DLC1Q96QB1 1528 aa24.38■■□□□ 1.49
DDB1-205ENST00000535174 POGKQ9P215 609 aa24.36■■□□□ 1.49
DDB1-205ENST00000535174 ATAD2Q6PL18 1390 aa24.36■■□□□ 1.49
DDB1-205ENST00000535174 TONSLQ96HA7 1378 aa24.36■■□□□ 1.49
DDB1-205ENST00000535174 SPATA31A3Q5VYP0 1347 aa24.35■■□□□ 1.49
DDB1-205ENST00000535174 USP32Q8NFA0 1604 aa24.35■■□□□ 1.49
DDB1-205ENST00000535174 KRT28Q7Z3Y7 464 aa24.35■■□□□ 1.49
DDB1-205ENST00000535174 PHF8Q9UPP1 1060 aa24.35■■□□□ 1.49
DDB1-205ENST00000535174 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.35■■□□□ 1.49
DDB1-205ENST00000535174 TNS3Q68CZ2 1445 aa24.35■■□□□ 1.49
DDB1-205ENST00000535174 ADGRB1O14514 1584 aa24.34■■□□□ 1.49
DDB1-205ENST00000535174 ADGRB2O60241 1585 aa24.34■■□□□ 1.49
DDB1-205ENST00000535174 HAP1P54257 671 aaPredicted RBP24.34■■□□□ 1.49
DDB1-205ENST00000535174 BCL9LQ86UU0 1499 aa24.33■■□□□ 1.49
DDB1-205ENST00000535174 PSME1Q06323 249 aa24.31■■□□□ 1.48
DDB1-205ENST00000535174 KDM2AQ9Y2K7 1162 aa24.31■■□□□ 1.48
DDB1-205ENST00000535174 ANKARQ7Z5J8 1434 aa24.3■■□□□ 1.48
DDB1-205ENST00000535174 DCAF11Q8TEB1 546 aa24.3■■□□□ 1.48
DDB1-205ENST00000535174 ABCA3Q99758 1704 aa24.3■■□□□ 1.48
DDB1-205ENST00000535174 PLEKHG5O94827 1062 aa24.29■■□□□ 1.48
DDB1-205ENST00000535174 TRAK1Q9UPV9 953 aa24.29■■□□□ 1.48
DDB1-205ENST00000535174 LMOD2Q6P5Q4 547 aa24.28■■□□□ 1.48
DDB1-205ENST00000535174 PLCH1Q4KWH8 1693 aa24.27■■□□□ 1.48
DDB1-205ENST00000535174 SLIT2O94813 1529 aa24.26■■□□□ 1.47
DDB1-205ENST00000535174 HIRIP3Q9BW71 556 aaPredicted RBP24.26■■□□□ 1.47
DDB1-205ENST00000535174 SBNO1A3KN83 1393 aa24.26■■□□□ 1.47
DDB1-205ENST00000535174 ARHGEF10O15013 1369 aa24.26■■□□□ 1.47
DDB1-205ENST00000535174 EIF3AQ14152 1382 aaKnown RBP24.26■■□□□ 1.47
DDB1-205ENST00000535174 PMFBP1Q8TBY8 1022 aa24.25■■□□□ 1.47
DDB1-205ENST00000535174 GJD4Q96KN9 370 aaPredicted RBP24.25■■□□□ 1.47
DDB1-205ENST00000535174 MINK1Q8N4C8 1332 aaPredicted RBP24.25■■□□□ 1.47
DDB1-205ENST00000535174 UNC5CLQ8IV45 518 aa24.24■■□□□ 1.47
DDB1-205ENST00000535174 TULP4Q9NRJ4 1543 aa24.24■■□□□ 1.47
DDB1-205ENST00000535174 RALGAPBQ86X10 1494 aa24.23■■□□□ 1.47
DDB1-205ENST00000535174 GLI3P10071 1580 aa24.23■■□□□ 1.47
DDB1-205ENST00000535174 ARHGEF28Q8N1W1 1705 aaKnown RBP24.23■■□□□ 1.47
DDB1-205ENST00000535174 NWD2Q9ULI1 1742 aa24.22■■□□□ 1.47
DDB1-205ENST00000535174 CABLES1Q8TDN4 633 aa24.22■■□□□ 1.47
DDB1-205ENST00000535174 TRPM3Q9HCF6 1732 aaPredicted RBP24.21■■□□□ 1.47
DDB1-205ENST00000535174 STAC3Q96MF2 364 aa24.2■■□□□ 1.46
DDB1-205ENST00000535174 GPRASP1Q5JY77 1395 aa24.19■■□□□ 1.46
DDB1-205ENST00000535174 ITSN1Q15811 1721 aa24.19■■□□□ 1.46
DDB1-205ENST00000535174 CCDC9Q9Y3X0 531 aaKnown RBP24.17■■□□□ 1.46
DDB1-205ENST00000535174 ALS2Q96Q42 1657 aa24.17■■□□□ 1.46
DDB1-205ENST00000535174 WASLO00401 505 aaPredicted RBP24.16■■□□□ 1.46
DDB1-205ENST00000535174 PRR36Q9H6K5 1346 aa24.15■■□□□ 1.46
DDB1-205ENST00000535174 EP400Q96L91 3159 aa24.15■■□□□ 1.46
DDB1-205ENST00000535174 ZNF316A6NFI3 1004 aaPredicted RBP24.15■■□□□ 1.46
DDB1-205ENST00000535174 BRWD3Q6RI45 1802 aa24.14■■□□□ 1.46
DDB1-205ENST00000535174 NGDNQ8NEJ9 315 aaKnown RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms