RNA–Protein interactions for RNA: ENST00000535042.1

TMEM258-202, Transcript of transmembrane protein 258, humanhuman

TSL 3

Gene TMEM258, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM258-202ENST00000535042 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.69■□□□□ 0.58
TMEM258-202ENST00000535042 TOM1O60784 492 aa18.68■□□□□ 0.58
TMEM258-202ENST00000535042 NALCNQ8IZF0 1738 aa18.68■□□□□ 0.58
TMEM258-202ENST00000535042 ARHGEF28Q8N1W1 1705 aaKnown RBP18.67■□□□□ 0.58
TMEM258-202ENST00000535042 ATF3P18847 181 aa18.66■□□□□ 0.58
TMEM258-202ENST00000535042 FBXO41Q8TF61 875 aa18.66■□□□□ 0.58
TMEM258-202ENST00000535042 MINK1Q8N4C8 1332 aaPredicted RBP18.66■□□□□ 0.58
TMEM258-202ENST00000535042 CADPS2Q86UW7 1296 aa18.65■□□□□ 0.58
TMEM258-202ENST00000535042 DCCP43146 1447 aa18.65■□□□□ 0.58
TMEM258-202ENST00000535042 PIP4K2BP78356 416 aa18.64■□□□□ 0.57
TMEM258-202ENST00000535042 HIRIP3Q9BW71 556 aaPredicted RBP18.64■□□□□ 0.57
TMEM258-202ENST00000535042 SLAIN2Q9P270 581 aa18.64■□□□□ 0.57
TMEM258-202ENST00000535042 CENPJQ9HC77 1338 aaPredicted RBP18.64■□□□□ 0.57
TMEM258-202ENST00000535042 MST1RQ04912 1400 aa18.62■□□□□ 0.57
TMEM258-202ENST00000535042 CDC42BPGQ6DT37 1551 aa18.61■□□□□ 0.57
TMEM258-202ENST00000535042 SCAF1Q9H7N4 1312 aaKnown RBP18.6■□□□□ 0.57
TMEM258-202ENST00000535042 NUTM2FA1L443 756 aa18.59■□□□□ 0.57
TMEM258-202ENST00000535042 EIF3AQ14152 1382 aaKnown RBP18.58■□□□□ 0.57
TMEM258-202ENST00000535042 WASLO00401 505 aaPredicted RBP18.58■□□□□ 0.56
TMEM258-202ENST00000535042 ADGRB2O60241 1585 aa18.58■□□□□ 0.56
TMEM258-202ENST00000535042 C1orf167Q5SNV9 1468 aa18.58■□□□□ 0.56
TMEM258-202ENST00000535042 USP47Q96K76 1375 aa18.57■□□□□ 0.56
TMEM258-202ENST00000535042 ST20-MTHFSA0A0A6YYL1 179 aa18.57■□□□□ 0.56
TMEM258-202ENST00000535042 ORAI2Q96SN7 254 aa18.56■□□□□ 0.56
TMEM258-202ENST00000535042 BRINP3Q76B58 766 aa18.55■□□□□ 0.56
TMEM258-202ENST00000535042 ILDR1Q86SU0 546 aaPredicted RBP18.55■□□□□ 0.56
TMEM258-202ENST00000535042 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
TMEM258-202ENST00000535042 PRR36Q9H6K5 1346 aa18.54■□□□□ 0.56
TMEM258-202ENST00000535042 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
TMEM258-202ENST00000535042 TESK2Q96S53 571 aa18.54■□□□□ 0.56
TMEM258-202ENST00000535042 FMN2Q9NZ56 1722 aa18.54■□□□□ 0.56
TMEM258-202ENST00000535042 TULP4Q9NRJ4 1543 aa18.53■□□□□ 0.56
TMEM258-202ENST00000535042 SBNO2Q9Y2G9 1366 aa18.53■□□□□ 0.56
TMEM258-202ENST00000535042 ROBO1Q9Y6N7 1651 aa18.51■□□□□ 0.55
TMEM258-202ENST00000535042 ESCO1Q5FWF5 840 aa18.51■□□□□ 0.55
TMEM258-202ENST00000535042 CABP2Q9NPB3 220 aa18.51■□□□□ 0.55
TMEM258-202ENST00000535042 ANKARQ7Z5J8 1434 aa18.5■□□□□ 0.55
TMEM258-202ENST00000535042 USP32Q8NFA0 1604 aa18.5■□□□□ 0.55
TMEM258-202ENST00000535042 DDX17Q92841 729 aaKnown RBP18.5■□□□□ 0.55
TMEM258-202ENST00000535042 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
TMEM258-202ENST00000535042 EVC2Q86UK5 1308 aa18.49■□□□□ 0.55
TMEM258-202ENST00000535042 HSPA5P11021 654 aaKnown RBP18.49■□□□□ 0.55
TMEM258-202ENST00000535042 HSPA1LP34931 641 aa18.49■□□□□ 0.55
TMEM258-202ENST00000535042 SRPK2P78362 688 aaKnown RBP18.49■□□□□ 0.55
TMEM258-202ENST00000535042 ATP7BP35670 1465 aa18.48■□□□□ 0.55
TMEM258-202ENST00000535042 EIF4G2P78344 907 aaKnown RBP eCLIP18.48■□□□□ 0.55
TMEM258-202ENST00000535042 PHF8Q9UPP1 1060 aa18.46■□□□□ 0.55
TMEM258-202ENST00000535042 FOXO3O43524 673 aa18.45■□□□□ 0.54
TMEM258-202ENST00000535042 PMFBP1Q8TBY8 1022 aa18.45■□□□□ 0.54
TMEM258-202ENST00000535042 CCDC61Q9Y6R9 512 aa18.44■□□□□ 0.54
TMEM258-202ENST00000535042 RGPD8O14715 1765 aaPredicted RBP18.44■□□□□ 0.54
TMEM258-202ENST00000535042 DISP3Q9P2K9 1392 aa18.43■□□□□ 0.54
TMEM258-202ENST00000535042 AHDC1Q5TGY3 1603 aaPredicted RBP18.42■□□□□ 0.54
TMEM258-202ENST00000535042 PLEKHG3A1L390 1219 aa18.41■□□□□ 0.54
TMEM258-202ENST00000535042 ZEB1P37275 1124 aaPredicted RBP18.41■□□□□ 0.54
TMEM258-202ENST00000535042 TMF1P82094 1093 aa18.41■□□□□ 0.54
TMEM258-202ENST00000535042 XPCQ01831 940 aaPredicted RBP18.41■□□□□ 0.54
TMEM258-202ENST00000535042 SLC24A1O60721 1099 aa18.4■□□□□ 0.54
TMEM258-202ENST00000535042 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
TMEM258-202ENST00000535042 NHSL1Q5SYE7 1610 aa18.4■□□□□ 0.54
TMEM258-202ENST00000535042 SOS2Q07890 1332 aaPredicted RBP18.4■□□□□ 0.54
TMEM258-202ENST00000535042 NPHP3Q7Z494 1330 aa18.4■□□□□ 0.54
TMEM258-202ENST00000535042 PPIP5K1Q6PFW1 1433 aa18.4■□□□□ 0.54
TMEM258-202ENST00000535042 TOPAZ1Q8N9V7 1692 aa18.39■□□□□ 0.53
TMEM258-202ENST00000535042 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
TMEM258-202ENST00000535042 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
TMEM258-202ENST00000535042 KIF1AQ12756 1690 aa18.38■□□□□ 0.53
TMEM258-202ENST00000535042 KRT28Q7Z3Y7 464 aa18.38■□□□□ 0.53
TMEM258-202ENST00000535042 NGDNQ8NEJ9 315 aaKnown RBP18.38■□□□□ 0.53
TMEM258-202ENST00000535042 ACEP12821 1306 aa18.38■□□□□ 0.53
TMEM258-202ENST00000535042 PXDNQ92626 1479 aa18.38■□□□□ 0.53
TMEM258-202ENST00000535042 COL16A1Q07092 1604 aaPredicted RBP18.38■□□□□ 0.53
TMEM258-202ENST00000535042 PHLPP1O60346 1717 aa18.37■□□□□ 0.53
TMEM258-202ENST00000535042 C11orf95C9JLR9 678 aaPredicted RBP18.37■□□□□ 0.53
TMEM258-202ENST00000535042 POLR3AO14802 1390 aaPredicted RBP18.36■□□□□ 0.53
TMEM258-202ENST00000535042 PSME1Q06323 249 aa18.36■□□□□ 0.53
TMEM258-202ENST00000535042 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
TMEM258-202ENST00000535042 TMC1Q8TDI8 760 aa18.34■□□□□ 0.53
TMEM258-202ENST00000535042 ITSN1Q15811 1721 aa18.34■□□□□ 0.53
TMEM258-202ENST00000535042 LRRC59Q96AG4 307 aaKnown RBP18.33■□□□□ 0.52
TMEM258-202ENST00000535042 CDCA8Q53HL2 280 aa18.32■□□□□ 0.52
TMEM258-202ENST00000535042 SPATA31A3Q5VYP0 1347 aa18.31■□□□□ 0.52
TMEM258-202ENST00000535042 CD163L1Q9NR16 1453 aa18.31■□□□□ 0.52
TMEM258-202ENST00000535042 SBNO1A3KN83 1393 aa18.3■□□□□ 0.52
TMEM258-202ENST00000535042 JCADQ9P266 1359 aa18.3■□□□□ 0.52
TMEM258-202ENST00000535042 CPSF1Q10570 1443 aaKnown RBP18.3■□□□□ 0.52
TMEM258-202ENST00000535042 PNPLA6Q8IY17 1366 aa18.3■□□□□ 0.52
TMEM258-202ENST00000535042 POLR3GLQ9BT43 218 aa18.29■□□□□ 0.52
TMEM258-202ENST00000535042 USP6P35125 1406 aa18.28■□□□□ 0.52
TMEM258-202ENST00000535042 KIF7Q2M1P5 1343 aa18.27■□□□□ 0.52
TMEM258-202ENST00000535042 TRPM3Q9HCF6 1732 aaPredicted RBP18.27■□□□□ 0.52
TMEM258-202ENST00000535042 TNS3Q68CZ2 1445 aa18.27■□□□□ 0.52
TMEM258-202ENST00000535042 SSH2Q76I76 1423 aa18.27■□□□□ 0.52
TMEM258-202ENST00000535042 PAK3O75914 559 aaPredicted RBP18.27■□□□□ 0.52
TMEM258-202ENST00000535042 ZNF692Q9BU19 519 aaPredicted RBP18.27■□□□□ 0.52
TMEM258-202ENST00000535042 NINLQ9Y2I6 1382 aa18.27■□□□□ 0.51
TMEM258-202ENST00000535042 A0A1W2PP64 1363 aa18.26■□□□□ 0.51
TMEM258-202ENST00000535042 LMOD2Q6P5Q4 547 aa18.25■□□□□ 0.51
TMEM258-202ENST00000535042 HDGFL2Q7Z4V5 671 aaPredicted RBP18.25■□□□□ 0.51
TMEM258-202ENST00000535042 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms