RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 TRMT2AQ8IZ69 625 aaKnown RBP8.63□□□□□ -1.03
RAG1-203ENST00000534663 TBC1D32Q96NH3 1257 aa8.63□□□□□ -1.03
RAG1-203ENST00000534663 APBB1O00213 710 aa8.63□□□□□ -1.03
RAG1-203ENST00000534663 MCM4P33991 863 aa8.63□□□□□ -1.03
RAG1-203ENST00000534663 SAMD9LQ8IVG5 1584 aa8.62□□□□□ -1.03
RAG1-203ENST00000534663 C1orf115Q9H7X2 142 aa8.62□□□□□ -1.03
RAG1-203ENST00000534663 MVPQ14764 893 aaKnown RBP8.62□□□□□ -1.03
RAG1-203ENST00000534663 XRCC6P12956 609 aaKnown RBP eCLIP8.62□□□□□ -1.03
RAG1-203ENST00000534663 PRDM15P57071 1507 aaPredicted RBP8.61□□□□□ -1.03
RAG1-203ENST00000534663 E9PCH4 1651 aa8.61□□□□□ -1.03
RAG1-203ENST00000534663 CHMP5Q9NZZ3 219 aa8.61□□□□□ -1.03
RAG1-203ENST00000534663 NOB1Q9ULX3 412 aaKnown RBP8.61□□□□□ -1.03
RAG1-203ENST00000534663 TRAPPC8Q9Y2L5 1435 aa8.61□□□□□ -1.03
RAG1-203ENST00000534663 ANKRD45Q5TZF3 282 aa8.61□□□□□ -1.03
RAG1-203ENST00000534663 PIK3C2GO75747 1445 aa8.61□□□□□ -1.03
RAG1-203ENST00000534663 ADCY10Q96PN6 1610 aa8.6□□□□□ -1.03
RAG1-203ENST00000534663 RIPK4P57078 832 aa8.6□□□□□ -1.03
RAG1-203ENST00000534663 TPRNQ4KMQ1 711 aa8.6□□□□□ -1.03
RAG1-203ENST00000534663 SSH1Q8WYL5 1049 aa8.6□□□□□ -1.03
RAG1-203ENST00000534663 SCAPERQ9BY12 1400 aa8.6□□□□□ -1.03
RAG1-203ENST00000534663 TRIM27P14373 513 aa8.59□□□□□ -1.03
RAG1-203ENST00000534663 ABCA8O94911 1581 aa8.59□□□□□ -1.03
RAG1-203ENST00000534663 FBLN1P23142 703 aa8.59□□□□□ -1.03
RAG1-203ENST00000534663 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.59□□□□□ -1.03
RAG1-203ENST00000534663 TMEM57Q8N5G2 664 aa8.59□□□□□ -1.03
RAG1-203ENST00000534663 NGEFQ8N5V2 710 aa8.59□□□□□ -1.03
RAG1-203ENST00000534663 MINK1Q8N4C8 1332 aaPredicted RBP8.59□□□□□ -1.03
RAG1-203ENST00000534663 ZBTB7CA1YPR0 619 aa8.58□□□□□ -1.04
RAG1-203ENST00000534663 WDR63Q8IWG1 891 aa8.58□□□□□ -1.04
RAG1-203ENST00000534663 DDX19BQ9UMR2 479 aa8.58□□□□□ -1.04
RAG1-203ENST00000534663 INSRP06213 1382 aa8.58□□□□□ -1.04
RAG1-203ENST00000534663 CFAP65Q6ZU64 1925 aaKnown RBP8.58□□□□□ -1.04
RAG1-203ENST00000534663 EIF2AK4Q9P2K8 1649 aaKnown RBP8.58□□□□□ -1.04
RAG1-203ENST00000534663 THUMPD2Q9BTF0 503 aaKnown RBP8.58□□□□□ -1.04
RAG1-203ENST00000534663 HMOX1P09601 288 aa8.57□□□□□ -1.04
RAG1-203ENST00000534663 ATF7IPQ6VMQ6 1270 aa8.57□□□□□ -1.04
RAG1-203ENST00000534663 ANP32BQ92688 251 aaKnown RBP8.57□□□□□ -1.04
RAG1-203ENST00000534663 ANTXR1Q9H6X2 564 aa8.57□□□□□ -1.04
RAG1-203ENST00000534663 STAG3Q9UJ98 1225 aa8.57□□□□□ -1.04
RAG1-203ENST00000534663 ARHGEF5Q12774 1597 aa8.57□□□□□ -1.04
RAG1-203ENST00000534663 FOXD4L5Q5VV16 416 aaPredicted RBP8.57□□□□□ -1.04
RAG1-203ENST00000534663 FOXD4L4Q8WXT5 416 aaPredicted RBP8.57□□□□□ -1.04
RAG1-203ENST00000534663 IPO8O15397 1037 aaKnown RBP8.56□□□□□ -1.04
RAG1-203ENST00000534663 ARID3AQ99856 593 aa8.56□□□□□ -1.04
RAG1-203ENST00000534663 TTC37Q6PGP7 1564 aa8.56□□□□□ -1.04
RAG1-203ENST00000534663 DUOX2Q9NRD8 1548 aa8.56□□□□□ -1.04
RAG1-203ENST00000534663 TMPOP42166 694 aaKnown RBP8.56□□□□□ -1.04
RAG1-203ENST00000534663 GBP4Q96PP9 640 aa8.56□□□□□ -1.04
RAG1-203ENST00000534663 RBM42Q9BTD8 480 aaKnown RBP8.56□□□□□ -1.04
RAG1-203ENST00000534663 GRPEL1Q9HAV7 217 aa8.56□□□□□ -1.04
RAG1-203ENST00000534663 CDC42BPBQ9Y5S2 1711 aa8.56□□□□□ -1.04
RAG1-203ENST00000534663 DDX11L8A8MPP1 907 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 EVC2Q86UK5 1308 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 STAC3Q96MF2 364 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 NINLQ9Y2I6 1382 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 UGGT1Q9NYU2 1555 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 NOS1P29475 1434 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 GOLGA6L22H0YM25 854 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 VSIG10Q8N0Z9 540 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP8.55□□□□□ -1.04
RAG1-203ENST00000534663 POLR3AO14802 1390 aaPredicted RBP8.55□□□□□ -1.04
RAG1-203ENST00000534663 MRE11P49959 708 aa8.55□□□□□ -1.04
RAG1-203ENST00000534663 MYO5CQ9NQX4 1742 aa8.54□□□□□ -1.04
RAG1-203ENST00000534663 SOX12O15370 315 aa8.54□□□□□ -1.04
RAG1-203ENST00000534663 GLIPR1L2Q4G1C9 344 aa8.54□□□□□ -1.04
RAG1-203ENST00000534663 TNPO1Q92973 898 aaKnown RBP8.54□□□□□ -1.04
RAG1-203ENST00000534663 HSP90AA2PQ14568 343 aaPredicted RBP8.54□□□□□ -1.04
RAG1-203ENST00000534663 DDX49Q9Y6V7 483 aaKnown RBP8.54□□□□□ -1.04
RAG1-203ENST00000534663 MAST1Q9Y2H9 1570 aa8.54□□□□□ -1.04
RAG1-203ENST00000534663 DIAPH1O60610 1272 aaKnown RBP8.53□□□□□ -1.04
RAG1-203ENST00000534663 ATP10AO60312 1499 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 ERVK-7P63135 1459 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 KIF13AQ9H1H9 1805 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 PRKAR2BP31323 418 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 FOXD4L6Q3SYB3 417 aaPredicted RBP8.53□□□□□ -1.04
RAG1-203ENST00000534663 FOXD4L3Q6VB84 417 aaPredicted RBP8.53□□□□□ -1.04
RAG1-203ENST00000534663 NOL8Q76FK4 1167 aaKnown RBP8.53□□□□□ -1.04
RAG1-203ENST00000534663 CHD1LQ86WJ1 897 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 UBE2Q2Q8WVN8 375 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 PLCH2O75038 1416 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 NPC1L1Q9UHC9 1359 aa8.53□□□□□ -1.04
RAG1-203ENST00000534663 NPM1P06748 294 aaKnown RBP eCLIP8.52□□□□□ -1.05
RAG1-203ENST00000534663 AAMPQ13685 434 aa8.52□□□□□ -1.05
RAG1-203ENST00000534663 PREX2Q70Z35 1606 aa8.52□□□□□ -1.05
RAG1-203ENST00000534663 ESPNB1AK53 854 aa8.52□□□□□ -1.05
RAG1-203ENST00000534663 SSFA2P28290 1259 aa8.51□□□□□ -1.05
RAG1-203ENST00000534663 SYNMO15061 1565 aa8.51□□□□□ -1.05
RAG1-203ENST00000534663 ABCC2Q92887 1545 aa8.51□□□□□ -1.05
RAG1-203ENST00000534663 MCTP1Q6DN14 999 aa8.51□□□□□ -1.05
RAG1-203ENST00000534663 CYB5RLQ6IPT4 315 aa8.51□□□□□ -1.05
RAG1-203ENST00000534663 TERF2IPQ9NYB0 399 aa8.51□□□□□ -1.05
RAG1-203ENST00000534663 KIF16BQ96L93 1317 aa8.5□□□□□ -1.05
RAG1-203ENST00000534663 HDGFL2Q7Z4V5 671 aaPredicted RBP8.5□□□□□ -1.05
RAG1-203ENST00000534663 PTPRTO14522 1441 aa8.5□□□□□ -1.05
RAG1-203ENST00000534663 PRAM1Q96QH2 718 aa8.5□□□□□ -1.05
RAG1-203ENST00000534663 TRIM35Q9UPQ4 493 aa8.5□□□□□ -1.05
RAG1-203ENST00000534663 IQGAP3Q86VI3 1631 aa8.5□□□□□ -1.05
RAG1-203ENST00000534663 KDM5AP29375 1690 aaKnown RBP8.5□□□□□ -1.05
RAG1-203ENST00000534663 VGFO15240 615 aaPredicted RBP8.5□□□□□ -1.05
RAG1-203ENST00000534663 CD2BP2O95400 341 aaKnown RBP8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms