RNA–Protein interactions for RNA: ENST00000534045.5

LRRK1-210, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 3

Gene LRRK1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-210ENST00000534045 C1orf167Q5SNV9 1468 aa27.66■■■□□ 2.02
LRRK1-210ENST00000534045 DDX17Q92841 729 aaKnown RBP27.66■■■□□ 2.02
LRRK1-210ENST00000534045 STAC3Q96MF2 364 aa27.66■■■□□ 2.02
LRRK1-210ENST00000534045 ORAI2Q96SN7 254 aa27.66■■■□□ 2.02
LRRK1-210ENST00000534045 ESCO1Q5FWF5 840 aa27.65■■■□□ 2.02
LRRK1-210ENST00000534045 MYOM2P54296 1465 aa27.64■■■□□ 2.02
LRRK1-210ENST00000534045 YTHDC2Q9H6S0 1430 aaKnown RBP27.64■■■□□ 2.02
LRRK1-210ENST00000534045 NHSL1Q5SYE7 1610 aa27.63■■■□□ 2.01
LRRK1-210ENST00000534045 SIRT1Q96EB6 747 aa27.63■■■□□ 2.01
LRRK1-210ENST00000534045 NUTM2FA1L443 756 aa27.62■■■□□ 2.01
LRRK1-210ENST00000534045 POGKQ9P215 609 aa27.61■■■□□ 2.01
LRRK1-210ENST00000534045 SHPRHQ149N8 1683 aa27.61■■■□□ 2.01
LRRK1-210ENST00000534045 TECPR2O15040 1411 aa27.6■■■□□ 2.01
LRRK1-210ENST00000534045 NRXN1Q9ULB1 1477 aa27.57■■■□□ 2
LRRK1-210ENST00000534045 CDC42BPGQ6DT37 1551 aa27.57■■■□□ 2
LRRK1-210ENST00000534045 SAFB2Q14151 953 aaKnown RBP eCLIP27.57■■■□□ 2
LRRK1-210ENST00000534045 POTEAQ6S8J7 498 aa27.57■■■□□ 2
LRRK1-210ENST00000534045 PLEKHH1Q9ULM0 1364 aa27.57■■■□□ 2
LRRK1-210ENST00000534045 PRAM1Q96QH2 718 aa27.56■■■□□ 2
LRRK1-210ENST00000534045 ZNF772Q68DY9 489 aaPredicted RBP27.55■■■□□ 2
LRRK1-210ENST00000534045 NPHP3Q7Z494 1330 aa27.54■■■□□ 2
LRRK1-210ENST00000534045 TRAK1Q9UPV9 953 aa27.54■■■□□ 2
LRRK1-210ENST00000534045 FOXO3O43524 673 aa27.53■■■□□ 2
LRRK1-210ENST00000534045 SOS2Q07890 1332 aaPredicted RBP27.52■■■□□ 2
LRRK1-210ENST00000534045 LRP6O75581 1613 aa27.48■■□□□ 1.99
LRRK1-210ENST00000534045 PNPLA6Q8IY17 1366 aa27.48■■□□□ 1.99
LRRK1-210ENST00000534045 FMN2Q9NZ56 1722 aa27.47■■□□□ 1.99
LRRK1-210ENST00000534045 ADAMTS2O95450 1211 aa27.46■■□□□ 1.99
LRRK1-210ENST00000534045 XPCQ01831 940 aaPredicted RBP27.46■■□□□ 1.99
LRRK1-210ENST00000534045 C8orf37Q96NL8 207 aa27.46■■□□□ 1.99
LRRK1-210ENST00000534045 NGLY1Q96IV0 654 aa27.43■■□□□ 1.98
LRRK1-210ENST00000534045 PHF8Q9UPP1 1060 aa27.42■■□□□ 1.98
LRRK1-210ENST00000534045 AFF2P51816 1311 aa27.41■■□□□ 1.98
LRRK1-210ENST00000534045 HIRIP3Q9BW71 556 aaPredicted RBP27.41■■□□□ 1.98
LRRK1-210ENST00000534045 MINK1Q8N4C8 1332 aaPredicted RBP27.41■■□□□ 1.98
LRRK1-210ENST00000534045 PSME1Q06323 249 aa27.4■■□□□ 1.98
LRRK1-210ENST00000534045 KRT28Q7Z3Y7 464 aa27.4■■□□□ 1.98
LRRK1-210ENST00000534045 RXRBP28702 533 aa27.39■■□□□ 1.98
LRRK1-210ENST00000534045 DLC1Q96QB1 1528 aa27.39■■□□□ 1.98
LRRK1-210ENST00000534045 KIF1AQ12756 1690 aa27.39■■□□□ 1.97
LRRK1-210ENST00000534045 ADGRB1O14514 1584 aa27.39■■□□□ 1.97
LRRK1-210ENST00000534045 RGPD8O14715 1765 aaPredicted RBP27.38■■□□□ 1.97
LRRK1-210ENST00000534045 NEUROD1Q13562 356 aa27.37■■□□□ 1.97
LRRK1-210ENST00000534045 QTRT2Q9H974 415 aaKnown RBP27.34■■□□□ 1.97
LRRK1-210ENST00000534045 KIAA1210Q9ULL0 1709 aa27.33■■□□□ 1.97
LRRK1-210ENST00000534045 LMOD2Q6P5Q4 547 aa27.33■■□□□ 1.97
LRRK1-210ENST00000534045 PMFBP1Q8TBY8 1022 aa27.33■■□□□ 1.97
LRRK1-210ENST00000534045 EIF3AQ14152 1382 aaKnown RBP27.33■■□□□ 1.97
LRRK1-210ENST00000534045 ARHGEF28Q8N1W1 1705 aaKnown RBP27.33■■□□□ 1.96
LRRK1-210ENST00000534045 WASLO00401 505 aaPredicted RBP27.32■■□□□ 1.96
LRRK1-210ENST00000534045 HAP1P54257 671 aaPredicted RBP27.32■■□□□ 1.96
LRRK1-210ENST00000534045 SIN3AQ96ST3 1273 aa27.32■■□□□ 1.96
LRRK1-210ENST00000534045 ADGRB2O60241 1585 aa27.31■■□□□ 1.96
LRRK1-210ENST00000534045 L3MBTL2Q969R5 705 aa27.3■■□□□ 1.96
LRRK1-210ENST00000534045 SPATA31A3Q5VYP0 1347 aa27.3■■□□□ 1.96
LRRK1-210ENST00000534045 PXDNQ92626 1479 aa27.3■■□□□ 1.96
LRRK1-210ENST00000534045 USP21Q9UK80 565 aa27.29■■□□□ 1.96
LRRK1-210ENST00000534045 COL22A1Q8NFW1 1626 aaPredicted RBP27.28■■□□□ 1.96
LRRK1-210ENST00000534045 ANKARQ7Z5J8 1434 aa27.28■■□□□ 1.96
LRRK1-210ENST00000534045 TRIM26Q12899 539 aaPredicted RBP27.28■■□□□ 1.96
LRRK1-210ENST00000534045 NBPF1Q3BBV0 1214 aa27.28■■□□□ 1.96
LRRK1-210ENST00000534045 PLEKHG5O94827 1062 aa27.27■■□□□ 1.96
LRRK1-210ENST00000534045 RBM6P78332 1123 aaKnown RBP27.26■■□□□ 1.95
LRRK1-210ENST00000534045 NGDNQ8NEJ9 315 aaKnown RBP27.26■■□□□ 1.95
LRRK1-210ENST00000534045 GPRASP1Q5JY77 1395 aa27.24■■□□□ 1.95
LRRK1-210ENST00000534045 FNBP4Q8N3X1 1017 aaPredicted RBP27.23■■□□□ 1.95
LRRK1-210ENST00000534045 TRPC5Q9UL62 973 aaPredicted RBP27.23■■□□□ 1.95
LRRK1-210ENST00000534045 MARF1Q9Y4F3 1742 aaKnown RBP27.23■■□□□ 1.95
LRRK1-210ENST00000534045 CDK19Q9BWU1 502 aa27.22■■□□□ 1.95
LRRK1-210ENST00000534045 USP32Q8NFA0 1604 aa27.22■■□□□ 1.95
LRRK1-210ENST00000534045 NUDT16Q96DE0 195 aaKnown RBP27.21■■□□□ 1.95
LRRK1-210ENST00000534045 ITSN1Q15811 1721 aa27.2■■□□□ 1.94
LRRK1-210ENST00000534045 SBNO1A3KN83 1393 aa27.2■■□□□ 1.94
LRRK1-210ENST00000534045 PRR36Q9H6K5 1346 aa27.19■■□□□ 1.94
LRRK1-210ENST00000534045 PAK3O75914 559 aaPredicted RBP27.19■■□□□ 1.94
LRRK1-210ENST00000534045 TNS3Q68CZ2 1445 aa27.18■■□□□ 1.94
LRRK1-210ENST00000534045 CABLES1Q8TDN4 633 aa27.18■■□□□ 1.94
LRRK1-210ENST00000534045 ARHGEF10O15013 1369 aa27.18■■□□□ 1.94
LRRK1-210ENST00000534045 TULP4Q9NRJ4 1543 aa27.16■■□□□ 1.94
LRRK1-210ENST00000534045 CENPJQ9HC77 1338 aaPredicted RBP27.16■■□□□ 1.94
LRRK1-210ENST00000534045 SRPK2P78362 688 aaKnown RBP27.15■■□□□ 1.94
LRRK1-210ENST00000534045 CCDC61Q9Y6R9 512 aa27.14■■□□□ 1.94
LRRK1-210ENST00000534045 CDK12Q9NYV4 1490 aaPredicted RBP27.13■■□□□ 1.93
LRRK1-210ENST00000534045 TRPM1Q7Z4N2 1603 aa27.1■■□□□ 1.93
LRRK1-210ENST00000534045 UNC5CLQ8IV45 518 aa27.1■■□□□ 1.93
LRRK1-210ENST00000534045 QRICH2Q9H0J4 1663 aa27.09■■□□□ 1.93
LRRK1-210ENST00000534045 ABCA3Q99758 1704 aa27.09■■□□□ 1.93
LRRK1-210ENST00000534045 ROCK2O75116 1388 aaKnown RBP27.09■■□□□ 1.93
LRRK1-210ENST00000534045 GJD4Q96KN9 370 aaPredicted RBP27.07■■□□□ 1.92
LRRK1-210ENST00000534045 UPF1Q92900 1129 aaKnown RBP eCLIP27.06■■□□□ 1.92
LRRK1-210ENST00000534045 CABP2Q9NPB3 220 aa27.06■■□□□ 1.92
LRRK1-210ENST00000534045 CCDC9Q9Y3X0 531 aaKnown RBP27.06■■□□□ 1.92
LRRK1-210ENST00000534045 TRPM3Q9HCF6 1732 aaPredicted RBP27.06■■□□□ 1.92
LRRK1-210ENST00000534045 TONSLQ96HA7 1378 aa27.06■■□□□ 1.92
LRRK1-210ENST00000534045 NBPF8Q3BBV2 869 aa27.05■■□□□ 1.92
LRRK1-210ENST00000534045 ACEP12821 1306 aa27.05■■□□□ 1.92
LRRK1-210ENST00000534045 BCL9LQ86UU0 1499 aa27.05■■□□□ 1.92
LRRK1-210ENST00000534045 TOPAZ1Q8N9V7 1692 aa27.05■■□□□ 1.92
LRRK1-210ENST00000534045 ATRNO75882 1429 aa27.04■■□□□ 1.92
LRRK1-210ENST00000534045 PLEKHG3A1L390 1219 aa27.03■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms