RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 CFDP1Q9UEE9 299 aaPredicted RBP11.81□□□□□ -0.52
CASP4-212ENST00000533730 PLEKHH2Q8IVE3 1493 aa11.81□□□□□ -0.52
CASP4-212ENST00000533730 FAM205CA6NFA0 338 aa11.8□□□□□ -0.52
CASP4-212ENST00000533730 VARS2Q5ST30 1063 aaKnown RBP11.8□□□□□ -0.52
CASP4-212ENST00000533730 KANK4Q5T7N3 995 aaPredicted RBP11.8□□□□□ -0.52
CASP4-212ENST00000533730 KDM4CQ9H3R0 1056 aa11.8□□□□□ -0.52
CASP4-212ENST00000533730 POGZQ7Z3K3 1410 aa11.79□□□□□ -0.52
CASP4-212ENST00000533730 ZNF518AQ6AHZ1 1483 aa11.79□□□□□ -0.52
CASP4-212ENST00000533730 RAPGEF3O95398 923 aa11.79□□□□□ -0.52
CASP4-212ENST00000533730 TYW1BQ6NUM6 668 aa11.79□□□□□ -0.52
CASP4-212ENST00000533730 RICTORQ6R327 1708 aa11.78□□□□□ -0.52
CASP4-212ENST00000533730 ABCC1P33527 1531 aa11.78□□□□□ -0.52
CASP4-212ENST00000533730 ZMYM4Q5VZL5 1548 aa11.78□□□□□ -0.52
CASP4-212ENST00000533730 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
CASP4-212ENST00000533730 HS3ST6Q96QI5 342 aa11.78□□□□□ -0.52
CASP4-212ENST00000533730 FRMPD1Q5SYB0 1578 aa11.78□□□□□ -0.52
CASP4-212ENST00000533730 KIAA1107Q9UPP5 1409 aa11.77□□□□□ -0.52
CASP4-212ENST00000533730 MAGI2Q86UL8 1455 aa11.77□□□□□ -0.52
CASP4-212ENST00000533730 PPP4R3BQ5MIZ7 849 aa11.77□□□□□ -0.53
CASP4-212ENST00000533730 FBXW7Q969H0 707 aa11.77□□□□□ -0.53
CASP4-212ENST00000533730 RSPH6AQ9H0K4 717 aa11.77□□□□□ -0.53
CASP4-212ENST00000533730 ZNF777Q9ULD5 760 aaPredicted RBP11.77□□□□□ -0.53
CASP4-212ENST00000533730 SAMD9LQ8IVG5 1584 aa11.76□□□□□ -0.53
CASP4-212ENST00000533730 EN1Q05925 392 aaPredicted RBP11.76□□□□□ -0.53
CASP4-212ENST00000533730 ADAM33Q9BZ11 813 aa11.76□□□□□ -0.53
CASP4-212ENST00000533730 MYOM3Q5VTT5 1437 aa11.76□□□□□ -0.53
CASP4-212ENST00000533730 MIA2Q96PC5 1412 aa11.76□□□□□ -0.53
CASP4-212ENST00000533730 KDM5CP41229 1560 aa11.75□□□□□ -0.53
CASP4-212ENST00000533730 TRIM66O15016 1216 aa11.74□□□□□ -0.53
CASP4-212ENST00000533730 POTEEQ6S8J3 1075 aa11.74□□□□□ -0.53
CASP4-212ENST00000533730 ZNF687Q8N1G0 1237 aa11.74□□□□□ -0.53
CASP4-212ENST00000533730 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
CASP4-212ENST00000533730 SYCP2Q9BX26 1530 aa11.74□□□□□ -0.53
CASP4-212ENST00000533730 PDE4DQ08499 809 aa11.73□□□□□ -0.53
CASP4-212ENST00000533730 RSPH4AQ5TD94 716 aa11.73□□□□□ -0.53
CASP4-212ENST00000533730 ZFYVE16Q7Z3T8 1539 aa11.73□□□□□ -0.53
CASP4-212ENST00000533730 ARHGEF40Q8TER5 1519 aa11.73□□□□□ -0.53
CASP4-212ENST00000533730 ARHGEF12Q9NZN5 1544 aa11.73□□□□□ -0.53
CASP4-212ENST00000533730 CAMSAP2Q08AD1 1489 aa11.72□□□□□ -0.53
CASP4-212ENST00000533730 MLH3Q9UHC1 1453 aa11.72□□□□□ -0.53
CASP4-212ENST00000533730 TRAPPC8Q9Y2L5 1435 aa11.72□□□□□ -0.53
CASP4-212ENST00000533730 HECW2Q9P2P5 1572 aa11.71□□□□□ -0.53
CASP4-212ENST00000533730 POTEMA6NI47 508 aa11.71□□□□□ -0.53
CASP4-212ENST00000533730 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
CASP4-212ENST00000533730 AFAP1Q8N556 730 aa11.71□□□□□ -0.53
CASP4-212ENST00000533730 RBM33Q96EV2 1170 aaKnown RBP11.71□□□□□ -0.53
CASP4-212ENST00000533730 HNRNPMP52272 730 aaKnown RBP eCLIP11.7□□□□□ -0.54
CASP4-212ENST00000533730 TSR1Q2NL82 804 aaKnown RBP11.7□□□□□ -0.54
CASP4-212ENST00000533730 C6orf132Q5T0Z8 1188 aa11.7□□□□□ -0.54
CASP4-212ENST00000533730 MBD5Q9P267 1494 aa11.7□□□□□ -0.54
CASP4-212ENST00000533730 SPAG9O60271 1321 aaKnown RBP11.69□□□□□ -0.54
CASP4-212ENST00000533730 ZNF644Q9H582 1327 aaPredicted RBP11.69□□□□□ -0.54
CASP4-212ENST00000533730 MAP3K7O43318 606 aa11.69□□□□□ -0.54
CASP4-212ENST00000533730 MYT1LQ9UL68 1186 aa11.69□□□□□ -0.54
CASP4-212ENST00000533730 ARHGEF5Q12774 1597 aa11.69□□□□□ -0.54
CASP4-212ENST00000533730 CCDC141Q6ZP82 1450 aa11.69□□□□□ -0.54
CASP4-212ENST00000533730 FGD6Q6ZV73 1430 aa11.69□□□□□ -0.54
CASP4-212ENST00000533730 YEATS2Q9ULM3 1422 aa11.69□□□□□ -0.54
CASP4-212ENST00000533730 ATP10AO60312 1499 aa11.68□□□□□ -0.54
CASP4-212ENST00000533730 C9orf84Q5VXU9 1444 aa11.68□□□□□ -0.54
CASP4-212ENST00000533730 TRIM26Q12899 539 aaPredicted RBP11.67□□□□□ -0.54
CASP4-212ENST00000533730 ARID3AQ99856 593 aa11.67□□□□□ -0.54
CASP4-212ENST00000533730 CDHR5Q9HBB8 845 aa11.67□□□□□ -0.54
CASP4-212ENST00000533730 NPDC1Q9NQX5 325 aaPredicted RBP11.67□□□□□ -0.54
CASP4-212ENST00000533730 RTEL1-TNFRSF6BF6WH68 1400 aa11.67□□□□□ -0.54
CASP4-212ENST00000533730 PTPN23Q9H3S7 1636 aa11.67□□□□□ -0.54
CASP4-212ENST00000533730 ATP7AQ04656 1500 aa11.66□□□□□ -0.54
CASP4-212ENST00000533730 TCOF1Q13428 1488 aaKnown RBP11.66□□□□□ -0.54
CASP4-212ENST00000533730 GPR37O15354 613 aa11.66□□□□□ -0.54
CASP4-212ENST00000533730 REREQ9P2R6 1566 aa11.66□□□□□ -0.54
CASP4-212ENST00000533730 INO80Q9ULG1 1556 aaPredicted RBP11.66□□□□□ -0.54
CASP4-212ENST00000533730 KIDINS220Q9ULH0 1771 aa11.65□□□□□ -0.54
CASP4-212ENST00000533730 TSPY4P0CV99 314 aa11.65□□□□□ -0.54
CASP4-212ENST00000533730 TSPY10P0CW01 314 aa11.65□□□□□ -0.54
CASP4-212ENST00000533730 DIP2CQ9Y2E4 1556 aa11.65□□□□□ -0.54
CASP4-212ENST00000533730 ARID4BQ4LE39 1312 aaPredicted RBP11.64□□□□□ -0.55
CASP4-212ENST00000533730 ARHGAP33O14559 1287 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 COL9A1P20849 921 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 PTPREP23469 700 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 PBX2P40425 430 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 FAM117AQ9C073 453 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 C1orf115Q9H7X2 142 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 AXIN2Q9Y2T1 843 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 ABCA6Q8N139 1617 aa11.64□□□□□ -0.55
CASP4-212ENST00000533730 PSEN2P49810 448 aa11.63□□□□□ -0.55
CASP4-212ENST00000533730 PTGDRQ13258 359 aa11.63□□□□□ -0.55
CASP4-212ENST00000533730 SHANK2Q9UPX8 1470 aa11.63□□□□□ -0.55
CASP4-212ENST00000533730 MAST1Q9Y2H9 1570 aa11.62□□□□□ -0.55
CASP4-212ENST00000533730 NUTM2FA1L443 756 aa11.62□□□□□ -0.55
CASP4-212ENST00000533730 KCNK17Q96T54 332 aa11.62□□□□□ -0.55
CASP4-212ENST00000533730 AGLP35573 1532 aa11.61□□□□□ -0.55
CASP4-212ENST00000533730 PPP1R3GB7ZBB8 358 aa11.61□□□□□ -0.55
CASP4-212ENST00000533730 KRTAP3-3Q9BYR6 98 aa11.61□□□□□ -0.55
CASP4-212ENST00000533730 KRTAP3-2Q9BYR7 98 aa11.61□□□□□ -0.55
CASP4-212ENST00000533730 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.61□□□□□ -0.55
CASP4-212ENST00000533730 ADGBQ8N7X0 1667 aa11.61□□□□□ -0.55
CASP4-212ENST00000533730 DAPK1P53355 1430 aa11.6□□□□□ -0.55
CASP4-212ENST00000533730 DNMT1P26358 1616 aaKnown RBP11.6□□□□□ -0.55
CASP4-212ENST00000533730 A2MP01023 1474 aa11.6□□□□□ -0.55
CASP4-212ENST00000533730 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms