RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 NUTM2AQ8IVF1 878 aaPredicted RBP15.29■□□□□ 0.04
CAPN1-225ENST00000533704 LRP6O75581 1613 aa15.28■□□□□ 0.04
CAPN1-225ENST00000533704 PLEKHH1Q9ULM0 1364 aa15.28■□□□□ 0.04
CAPN1-225ENST00000533704 SPATA31A6Q5VVP1 1343 aa15.28■□□□□ 0.04
CAPN1-225ENST00000533704 ORAI2Q96SN7 254 aa15.28■□□□□ 0.04
CAPN1-225ENST00000533704 C14orf93Q9H972 538 aaKnown RBP15.28■□□□□ 0.04
CAPN1-225ENST00000533704 NRXN1Q9ULB1 1477 aa15.27■□□□□ 0.04
CAPN1-225ENST00000533704 TECPR2O15040 1411 aa15.27■□□□□ 0.04
CAPN1-225ENST00000533704 ABCC11Q96J66 1382 aa15.27■□□□□ 0.04
CAPN1-225ENST00000533704 NUTM2FA1L443 756 aa15.27■□□□□ 0.04
CAPN1-225ENST00000533704 DHX57Q6P158 1386 aaKnown RBP15.26■□□□□ 0.03
CAPN1-225ENST00000533704 POTEAQ6S8J7 498 aa15.26■□□□□ 0.03
CAPN1-225ENST00000533704 DCAF11Q8TEB1 546 aa15.26■□□□□ 0.03
CAPN1-225ENST00000533704 SAFB2Q14151 953 aaKnown RBP eCLIP15.25■□□□□ 0.03
CAPN1-225ENST00000533704 ESCO1Q5FWF5 840 aa15.25■□□□□ 0.03
CAPN1-225ENST00000533704 LRRC59Q96AG4 307 aaKnown RBP15.25■□□□□ 0.03
CAPN1-225ENST00000533704 RGPD8O14715 1765 aaPredicted RBP15.25■□□□□ 0.03
CAPN1-225ENST00000533704 FMN2Q9NZ56 1722 aa15.25■□□□□ 0.03
CAPN1-225ENST00000533704 POGKQ9P215 609 aa15.22■□□□□ 0.03
CAPN1-225ENST00000533704 PNPLA6Q8IY17 1366 aa15.22■□□□□ 0.03
CAPN1-225ENST00000533704 PRAM1Q96QH2 718 aa15.21■□□□□ 0.03
CAPN1-225ENST00000533704 XPCQ01831 940 aaPredicted RBP15.2■□□□□ 0.02
CAPN1-225ENST00000533704 TRAK1Q9UPV9 953 aa15.2■□□□□ 0.02
CAPN1-225ENST00000533704 SIRT1Q96EB6 747 aa15.19■□□□□ 0.02
CAPN1-225ENST00000533704 ADGRB1O14514 1584 aa15.19■□□□□ 0.02
CAPN1-225ENST00000533704 KIF1AQ12756 1690 aa15.19■□□□□ 0.02
CAPN1-225ENST00000533704 SOS2Q07890 1332 aaPredicted RBP15.18■□□□□ 0.02
CAPN1-225ENST00000533704 NPHP3Q7Z494 1330 aa15.18■□□□□ 0.02
CAPN1-225ENST00000533704 DLC1Q96QB1 1528 aa15.18■□□□□ 0.02
CAPN1-225ENST00000533704 FOXO3O43524 673 aa15.18■□□□□ 0.02
CAPN1-225ENST00000533704 ADAMTS2O95450 1211 aa15.17■□□□□ 0.02
CAPN1-225ENST00000533704 ZNF772Q68DY9 489 aaPredicted RBP15.17■□□□□ 0.02
CAPN1-225ENST00000533704 C8orf37Q96NL8 207 aa15.17■□□□□ 0.02
CAPN1-225ENST00000533704 AFF2P51816 1311 aa15.17■□□□□ 0.02
CAPN1-225ENST00000533704 MINK1Q8N4C8 1332 aaPredicted RBP15.16■□□□□ 0.02
CAPN1-225ENST00000533704 PXDNQ92626 1479 aa15.15■□□□□ 0.02
CAPN1-225ENST00000533704 ARHGEF28Q8N1W1 1705 aaKnown RBP15.15■□□□□ 0.02
CAPN1-225ENST00000533704 STAC3Q96MF2 364 aa15.15■□□□□ 0.02
CAPN1-225ENST00000533704 HIRIP3Q9BW71 556 aaPredicted RBP15.15■□□□□ 0.02
CAPN1-225ENST00000533704 COL22A1Q8NFW1 1626 aaPredicted RBP15.14■□□□□ 0.01
CAPN1-225ENST00000533704 ADGRB2O60241 1585 aa15.13■□□□□ 0.01
CAPN1-225ENST00000533704 NGLY1Q96IV0 654 aa15.13■□□□□ 0.01
CAPN1-225ENST00000533704 KIAA1210Q9ULL0 1709 aa15.13■□□□□ 0.01
CAPN1-225ENST00000533704 PHF8Q9UPP1 1060 aa15.13■□□□□ 0.01
CAPN1-225ENST00000533704 USP32Q8NFA0 1604 aa15.13■□□□□ 0.01
CAPN1-225ENST00000533704 MARF1Q9Y4F3 1742 aaKnown RBP15.12■□□□□ 0.01
CAPN1-225ENST00000533704 PLEKHG5O94827 1062 aa15.11■□□□□ 0.01
CAPN1-225ENST00000533704 KRT28Q7Z3Y7 464 aa15.11■□□□□ 0.01
CAPN1-225ENST00000533704 RXRBP28702 533 aa15.1■□□□□ 0.01
CAPN1-225ENST00000533704 PMFBP1Q8TBY8 1022 aa15.1■□□□□ 0.01
CAPN1-225ENST00000533704 NEUROD1Q13562 356 aa15.09■□□□□ 0.01
CAPN1-225ENST00000533704 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
CAPN1-225ENST00000533704 SIN3AQ96ST3 1273 aa15.09■□□□□ 0.01
CAPN1-225ENST00000533704 ANKARQ7Z5J8 1434 aa15.09■□□□□ 0.01
CAPN1-225ENST00000533704 PSME1Q06323 249 aa15.08■□□□□ 0
CAPN1-225ENST00000533704 ITSN1Q15811 1721 aa15.08■□□□□ 0
CAPN1-225ENST00000533704 HAP1P54257 671 aaPredicted RBP15.07■□□□□ 0
CAPN1-225ENST00000533704 NBPF1Q3BBV0 1214 aa15.07■□□□□ 0
CAPN1-225ENST00000533704 QTRT2Q9H974 415 aaKnown RBP15.07■□□□□ 0
CAPN1-225ENST00000533704 SPATA31A3Q5VYP0 1347 aa15.07■□□□□ 0
CAPN1-225ENST00000533704 EIF3AQ14152 1382 aaKnown RBP15.07■□□□□ 0
CAPN1-225ENST00000533704 TULP4Q9NRJ4 1543 aa15.07■□□□□ 0
CAPN1-225ENST00000533704 WASLO00401 505 aaPredicted RBP15.06■□□□□ 0
CAPN1-225ENST00000533704 USP21Q9UK80 565 aa15.06■□□□□ 0
CAPN1-225ENST00000533704 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
CAPN1-225ENST00000533704 L3MBTL2Q969R5 705 aa15.05■□□□□ -0
CAPN1-225ENST00000533704 PRR36Q9H6K5 1346 aa15.05■□□□□ -0
CAPN1-225ENST00000533704 ABCA3Q99758 1704 aa15.04■□□□□ -0
CAPN1-225ENST00000533704 RBM6P78332 1123 aaKnown RBP15.03■□□□□ -0
CAPN1-225ENST00000533704 NGDNQ8NEJ9 315 aaKnown RBP15.03■□□□□ -0
CAPN1-225ENST00000533704 CABLES1Q8TDN4 633 aa15.03■□□□□ -0
CAPN1-225ENST00000533704 TRPM3Q9HCF6 1732 aaPredicted RBP15.03■□□□□ -0
CAPN1-225ENST00000533704 QRICH2Q9H0J4 1663 aa15.03■□□□□ -0
CAPN1-225ENST00000533704 SBNO1A3KN83 1393 aa15.02■□□□□ -0
CAPN1-225ENST00000533704 GPRASP1Q5JY77 1395 aa15.02■□□□□ -0
CAPN1-225ENST00000533704 TRPM1Q7Z4N2 1603 aa15.02□□□□□ -0.01
CAPN1-225ENST00000533704 CDK12Q9NYV4 1490 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-225ENST00000533704 NUDT16Q96DE0 195 aaKnown RBP15.01□□□□□ -0.01
CAPN1-225ENST00000533704 CDK19Q9BWU1 502 aa15.01□□□□□ -0.01
CAPN1-225ENST00000533704 TRPC5Q9UL62 973 aaPredicted RBP15.01□□□□□ -0.01
CAPN1-225ENST00000533704 ATP7BP35670 1465 aa15.01□□□□□ -0.01
CAPN1-225ENST00000533704 RGS12O14924 1447 aa15□□□□□ -0.01
CAPN1-225ENST00000533704 ARHGEF10O15013 1369 aa15□□□□□ -0.01
CAPN1-225ENST00000533704 PAK3O75914 559 aaPredicted RBP15□□□□□ -0.01
CAPN1-225ENST00000533704 FNBP4Q8N3X1 1017 aaPredicted RBP15□□□□□ -0.01
CAPN1-225ENST00000533704 ALS2Q96Q42 1657 aa15□□□□□ -0.01
CAPN1-225ENST00000533704 CENPJQ9HC77 1338 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-225ENST00000533704 TRIM26Q12899 539 aaPredicted RBP14.99□□□□□ -0.01
CAPN1-225ENST00000533704 PLCH1Q4KWH8 1693 aa14.99□□□□□ -0.01
CAPN1-225ENST00000533704 TOPAZ1Q8N9V7 1692 aa14.99□□□□□ -0.01
CAPN1-225ENST00000533704 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.98□□□□□ -0.01
CAPN1-225ENST00000533704 ATRNO75882 1429 aa14.98□□□□□ -0.01
CAPN1-225ENST00000533704 BCL9LQ86UU0 1499 aa14.97□□□□□ -0.01
CAPN1-225ENST00000533704 SRPK2P78362 688 aaKnown RBP14.97□□□□□ -0.01
CAPN1-225ENST00000533704 ROCK2O75116 1388 aaKnown RBP14.96□□□□□ -0.02
CAPN1-225ENST00000533704 UPF1Q92900 1129 aaKnown RBP eCLIP14.95□□□□□ -0.02
CAPN1-225ENST00000533704 NWD2Q9ULI1 1742 aa14.95□□□□□ -0.02
CAPN1-225ENST00000533704 SLIT2O94813 1529 aa14.94□□□□□ -0.02
CAPN1-225ENST00000533704 UNC5CLQ8IV45 518 aa14.94□□□□□ -0.02
CAPN1-225ENST00000533704 CABP2Q9NPB3 220 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms