RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 LRPPRCP42704 1394 aaKnown RBP16.76■□□□□ 0.27
CLCF1-202ENST00000533438 ABCC11Q96J66 1382 aa16.75■□□□□ 0.27
CLCF1-202ENST00000533438 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
CLCF1-202ENST00000533438 PNPLA6Q8IY17 1366 aa16.73■□□□□ 0.27
CLCF1-202ENST00000533438 AFF2P51816 1311 aa16.72■□□□□ 0.27
CLCF1-202ENST00000533438 TMEM132EQ6IEE7 984 aa16.72■□□□□ 0.27
CLCF1-202ENST00000533438 SRCAPQ6ZRS2 3230 aa16.72■□□□□ 0.27
CLCF1-202ENST00000533438 YTHDC2Q9H6S0 1430 aaKnown RBP16.71■□□□□ 0.27
CLCF1-202ENST00000533438 RBM6P78332 1123 aaKnown RBP16.71■□□□□ 0.27
CLCF1-202ENST00000533438 QTRT2Q9H974 415 aaKnown RBP16.71■□□□□ 0.27
CLCF1-202ENST00000533438 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
CLCF1-202ENST00000533438 FMN2Q9NZ56 1722 aa16.7■□□□□ 0.26
CLCF1-202ENST00000533438 PLEKHH1Q9ULM0 1364 aa16.7■□□□□ 0.26
CLCF1-202ENST00000533438 HRCP23327 699 aa16.7■□□□□ 0.26
CLCF1-202ENST00000533438 WAPLQ7Z5K2 1190 aa16.7■□□□□ 0.26
CLCF1-202ENST00000533438 C14orf93Q9H972 538 aaKnown RBP16.7■□□□□ 0.26
CLCF1-202ENST00000533438 STK26Q9P289 416 aa16.7■□□□□ 0.26
CLCF1-202ENST00000533438 NUTM2BA6NNL0 878 aaPredicted RBP16.69■□□□□ 0.26
CLCF1-202ENST00000533438 NUTM2EB1AL46 878 aaPredicted RBP16.69■□□□□ 0.26
CLCF1-202ENST00000533438 NUTM2AQ8IVF1 878 aaPredicted RBP16.69■□□□□ 0.26
CLCF1-202ENST00000533438 COL22A1Q8NFW1 1626 aaPredicted RBP16.68■□□□□ 0.26
CLCF1-202ENST00000533438 SIRT1Q96EB6 747 aa16.67■□□□□ 0.26
CLCF1-202ENST00000533438 CFAP70Q5T0N1 1121 aa16.66■□□□□ 0.26
CLCF1-202ENST00000533438 PXDNQ92626 1479 aa16.66■□□□□ 0.26
CLCF1-202ENST00000533438 DHX57Q6P158 1386 aaKnown RBP16.65■□□□□ 0.26
CLCF1-202ENST00000533438 ADGRB1O14514 1584 aa16.65■□□□□ 0.26
CLCF1-202ENST00000533438 RGPD8O14715 1765 aaPredicted RBP16.65■□□□□ 0.26
CLCF1-202ENST00000533438 FNBP4Q8N3X1 1017 aaPredicted RBP16.65■□□□□ 0.26
CLCF1-202ENST00000533438 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
CLCF1-202ENST00000533438 ESCO1Q5FWF5 840 aa16.64■□□□□ 0.25
CLCF1-202ENST00000533438 KIF1AQ12756 1690 aa16.64■□□□□ 0.25
CLCF1-202ENST00000533438 NPHP3Q7Z494 1330 aa16.64■□□□□ 0.25
CLCF1-202ENST00000533438 RGS12O14924 1447 aa16.62■□□□□ 0.25
CLCF1-202ENST00000533438 NGLY1Q96IV0 654 aa16.62■□□□□ 0.25
CLCF1-202ENST00000533438 C8orf37Q96NL8 207 aa16.62■□□□□ 0.25
CLCF1-202ENST00000533438 MARF1Q9Y4F3 1742 aaKnown RBP16.62■□□□□ 0.25
CLCF1-202ENST00000533438 ADGRB2O60241 1585 aa16.6■□□□□ 0.25
CLCF1-202ENST00000533438 NUTM2FA1L443 756 aa16.6■□□□□ 0.25
CLCF1-202ENST00000533438 FOXO3O43524 673 aa16.6■□□□□ 0.25
CLCF1-202ENST00000533438 STAC3Q96MF2 364 aa16.59■□□□□ 0.25
CLCF1-202ENST00000533438 DCAF11Q8TEB1 546 aa16.58■□□□□ 0.24
CLCF1-202ENST00000533438 PRAM1Q96QH2 718 aa16.58■□□□□ 0.24
CLCF1-202ENST00000533438 USP32Q8NFA0 1604 aa16.58■□□□□ 0.24
CLCF1-202ENST00000533438 ADAMTS2O95450 1211 aa16.57■□□□□ 0.24
CLCF1-202ENST00000533438 TRPC5Q9UL62 973 aaPredicted RBP16.57■□□□□ 0.24
CLCF1-202ENST00000533438 XPCQ01831 940 aaPredicted RBP16.56■□□□□ 0.24
CLCF1-202ENST00000533438 USP21Q9UK80 565 aa16.56■□□□□ 0.24
CLCF1-202ENST00000533438 KDM2AQ9Y2K7 1162 aa16.56■□□□□ 0.24
CLCF1-202ENST00000533438 CCDC125Q86Z20 511 aa16.55■□□□□ 0.24
CLCF1-202ENST00000533438 ARHGEF28Q8N1W1 1705 aaKnown RBP16.55■□□□□ 0.24
CLCF1-202ENST00000533438 ATRNO75882 1429 aa16.54■□□□□ 0.24
CLCF1-202ENST00000533438 ATAD2Q6PL18 1390 aa16.54■□□□□ 0.24
CLCF1-202ENST00000533438 SAFB2Q14151 953 aaKnown RBP eCLIP16.54■□□□□ 0.24
CLCF1-202ENST00000533438 ANKARQ7Z5J8 1434 aa16.53■□□□□ 0.24
CLCF1-202ENST00000533438 SPATA31A3Q5VYP0 1347 aa16.53■□□□□ 0.24
CLCF1-202ENST00000533438 POGKQ9P215 609 aa16.53■□□□□ 0.24
CLCF1-202ENST00000533438 TRAK1Q9UPV9 953 aa16.53■□□□□ 0.24
CLCF1-202ENST00000533438 KIAA1210Q9ULL0 1709 aa16.53■□□□□ 0.24
CLCF1-202ENST00000533438 EP400Q96L91 3159 aa16.52■□□□□ 0.24
CLCF1-202ENST00000533438 PHF8Q9UPP1 1060 aa16.52■□□□□ 0.24
CLCF1-202ENST00000533438 BCL9LQ86UU0 1499 aa16.52■□□□□ 0.23
CLCF1-202ENST00000533438 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.51■□□□□ 0.23
CLCF1-202ENST00000533438 KRT28Q7Z3Y7 464 aa16.51■□□□□ 0.23
CLCF1-202ENST00000533438 ABCA3Q99758 1704 aa16.5■□□□□ 0.23
CLCF1-202ENST00000533438 TNS3Q68CZ2 1445 aa16.5■□□□□ 0.23
CLCF1-202ENST00000533438 TRPM3Q9HCF6 1732 aaPredicted RBP16.5■□□□□ 0.23
CLCF1-202ENST00000533438 TULP4Q9NRJ4 1543 aa16.5■□□□□ 0.23
CLCF1-202ENST00000533438 SBNO1A3KN83 1393 aa16.49■□□□□ 0.23
CLCF1-202ENST00000533438 HIRIP3Q9BW71 556 aaPredicted RBP16.48■□□□□ 0.23
CLCF1-202ENST00000533438 MINK1Q8N4C8 1332 aaPredicted RBP16.47■□□□□ 0.23
CLCF1-202ENST00000533438 PSME1Q06323 249 aa16.47■□□□□ 0.23
CLCF1-202ENST00000533438 GJD4Q96KN9 370 aaPredicted RBP16.47■□□□□ 0.23
CLCF1-202ENST00000533438 EIF3AQ14152 1382 aaKnown RBP16.47■□□□□ 0.23
CLCF1-202ENST00000533438 ALS2Q96Q42 1657 aa16.46■□□□□ 0.23
CLCF1-202ENST00000533438 PRR36Q9H6K5 1346 aa16.46■□□□□ 0.23
CLCF1-202ENST00000533438 SLIT2O94813 1529 aa16.46■□□□□ 0.23
CLCF1-202ENST00000533438 ITSN1Q15811 1721 aa16.46■□□□□ 0.23
CLCF1-202ENST00000533438 ZRANB1Q9UGI0 708 aa16.46■□□□□ 0.23
CLCF1-202ENST00000533438 WASLO00401 505 aaPredicted RBP16.45■□□□□ 0.22
CLCF1-202ENST00000533438 PMFBP1Q8TBY8 1022 aa16.45■□□□□ 0.22
CLCF1-202ENST00000533438 PLCH1Q4KWH8 1693 aa16.44■□□□□ 0.22
CLCF1-202ENST00000533438 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
CLCF1-202ENST00000533438 ATP7BP35670 1465 aa16.43■□□□□ 0.22
CLCF1-202ENST00000533438 NWD2Q9ULI1 1742 aa16.43■□□□□ 0.22
CLCF1-202ENST00000533438 ONECUT3O60422 494 aaPredicted RBP16.43■□□□□ 0.22
CLCF1-202ENST00000533438 TOPAZ1Q8N9V7 1692 aa16.43■□□□□ 0.22
CLCF1-202ENST00000533438 CRYBG1Q9Y4K1 1723 aa16.42■□□□□ 0.22
CLCF1-202ENST00000533438 UNC5CLQ8IV45 518 aa16.42■□□□□ 0.22
CLCF1-202ENST00000533438 GLI3P10071 1580 aa16.42■□□□□ 0.22
CLCF1-202ENST00000533438 TRIM26Q12899 539 aaPredicted RBP16.4■□□□□ 0.22
CLCF1-202ENST00000533438 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
CLCF1-202ENST00000533438 CABLES1Q8TDN4 633 aa16.4■□□□□ 0.22
CLCF1-202ENST00000533438 GPRASP1Q5JY77 1395 aa16.39■□□□□ 0.21
CLCF1-202ENST00000533438 RALGAPBQ86X10 1494 aa16.38■□□□□ 0.21
CLCF1-202ENST00000533438 LMOD2Q6P5Q4 547 aa16.38■□□□□ 0.21
CLCF1-202ENST00000533438 NRAPQ86VF7 1730 aa16.37■□□□□ 0.21
CLCF1-202ENST00000533438 HAP1P54257 671 aaPredicted RBP16.37■□□□□ 0.21
CLCF1-202ENST00000533438 TRPM1Q7Z4N2 1603 aa16.37■□□□□ 0.21
CLCF1-202ENST00000533438 NUDT16Q96DE0 195 aaKnown RBP16.36■□□□□ 0.21
CLCF1-202ENST00000533438 CDK19Q9BWU1 502 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 190.7 ms