RNA–Protein interactions for RNA: ENST00000533048.5

NXF1-214, Transcript of nuclear RNA export factor 1, humanhuman

TSL 5

Gene NXF1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-214ENST00000533048 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.62■□□□□ 0.89
NXF1-214ENST00000533048 POGKQ9P215 609 aa20.62■□□□□ 0.89
NXF1-214ENST00000533048 CDCA8Q53HL2 280 aa20.61■□□□□ 0.89
NXF1-214ENST00000533048 PUS7Q96PZ0 661 aaKnown RBP20.61■□□□□ 0.89
NXF1-214ENST00000533048 STRCP1A6NGW2 1772 aa20.61■□□□□ 0.89
NXF1-214ENST00000533048 WAPLQ7Z5K2 1190 aa20.6■□□□□ 0.89
NXF1-214ENST00000533048 MYOM1P52179 1685 aa20.59■□□□□ 0.89
NXF1-214ENST00000533048 EVC2Q86UK5 1308 aa20.58■□□□□ 0.89
NXF1-214ENST00000533048 DMRT2Q9Y5R5 561 aa20.58■□□□□ 0.89
NXF1-214ENST00000533048 NALCNQ8IZF0 1738 aa20.56■□□□□ 0.88
NXF1-214ENST00000533048 SAFB2Q14151 953 aaKnown RBP eCLIP20.56■□□□□ 0.88
NXF1-214ENST00000533048 MINK1Q8N4C8 1332 aaPredicted RBP20.55■□□□□ 0.88
NXF1-214ENST00000533048 CDC42BPGQ6DT37 1551 aa20.55■□□□□ 0.88
NXF1-214ENST00000533048 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
NXF1-214ENST00000533048 NCOA3Q9Y6Q9 1424 aa20.53■□□□□ 0.88
NXF1-214ENST00000533048 ATAD2Q6PL18 1390 aa20.51■□□□□ 0.87
NXF1-214ENST00000533048 NINLQ9Y2I6 1382 aa20.51■□□□□ 0.87
NXF1-214ENST00000533048 WASLO00401 505 aaPredicted RBP20.5■□□□□ 0.87
NXF1-214ENST00000533048 DDX10Q13206 875 aaKnown RBP20.5■□□□□ 0.87
NXF1-214ENST00000533048 FMN2Q9NZ56 1722 aa20.5■□□□□ 0.87
NXF1-214ENST00000533048 ATP7BP35670 1465 aa20.49■□□□□ 0.87
NXF1-214ENST00000533048 TOPAZ1Q8N9V7 1692 aa20.48■□□□□ 0.87
NXF1-214ENST00000533048 CDK19Q9BWU1 502 aa20.48■□□□□ 0.87
NXF1-214ENST00000533048 DIEXFQ68CQ4 756 aaKnown RBP20.47■□□□□ 0.87
NXF1-214ENST00000533048 XIRP1Q702N8 1843 aaKnown RBP20.47■□□□□ 0.87
NXF1-214ENST00000533048 USP32Q8NFA0 1604 aa20.46■□□□□ 0.87
NXF1-214ENST00000533048 DCCP43146 1447 aa20.45■□□□□ 0.86
NXF1-214ENST00000533048 ANKARQ7Z5J8 1434 aa20.45■□□□□ 0.86
NXF1-214ENST00000533048 LRRC7Q96NW7 1537 aa20.45■□□□□ 0.86
NXF1-214ENST00000533048 SRPK2P78362 688 aaKnown RBP20.45■□□□□ 0.86
NXF1-214ENST00000533048 AEBP2Q6ZN18 517 aaPredicted RBP20.45■□□□□ 0.86
NXF1-214ENST00000533048 CABP2Q9NPB3 220 aa20.45■□□□□ 0.86
NXF1-214ENST00000533048 ZNF335Q9H4Z2 1342 aaPredicted RBP20.45■□□□□ 0.86
NXF1-214ENST00000533048 ITSN1Q15811 1721 aa20.44■□□□□ 0.86
NXF1-214ENST00000533048 PROSER2Q86WR7 435 aaPredicted RBP20.44■□□□□ 0.86
NXF1-214ENST00000533048 POLR3GLQ9BT43 218 aa20.44■□□□□ 0.86
NXF1-214ENST00000533048 TMEM94Q12767 1356 aa20.44■□□□□ 0.86
NXF1-214ENST00000533048 PRR36Q9H6K5 1346 aa20.41■□□□□ 0.86
NXF1-214ENST00000533048 LTBP4Q8N2S1 1624 aa20.41■□□□□ 0.86
NXF1-214ENST00000533048 CD163L1Q9NR16 1453 aa20.4■□□□□ 0.86
NXF1-214ENST00000533048 ANKRD36BQ8N2N9 1353 aa20.39■□□□□ 0.85
NXF1-214ENST00000533048 NUDT16Q96DE0 195 aaKnown RBP20.39■□□□□ 0.85
NXF1-214ENST00000533048 CCDC61Q9Y6R9 512 aa20.39■□□□□ 0.85
NXF1-214ENST00000533048 PPIP5K1Q6PFW1 1433 aa20.38■□□□□ 0.85
NXF1-214ENST00000533048 C19orf44Q9H6X5 657 aa20.38■□□□□ 0.85
NXF1-214ENST00000533048 RGPD8O14715 1765 aaPredicted RBP20.37■□□□□ 0.85
NXF1-214ENST00000533048 PER1O15534 1290 aaPredicted RBP20.37■□□□□ 0.85
NXF1-214ENST00000533048 RBM33Q96EV2 1170 aaKnown RBP20.37■□□□□ 0.85
NXF1-214ENST00000533048 SLC12A5Q9H2X9 1139 aa20.37■□□□□ 0.85
NXF1-214ENST00000533048 PANK3Q9H999 370 aa20.37■□□□□ 0.85
NXF1-214ENST00000533048 AKAP12Q02952 1782 aa20.36■□□□□ 0.85
NXF1-214ENST00000533048 CPSF1Q10570 1443 aaKnown RBP20.36■□□□□ 0.85
NXF1-214ENST00000533048 MON2Q7Z3U7 1717 aa20.35■□□□□ 0.85
NXF1-214ENST00000533048 A0A1W2PP64 1363 aa20.34■□□□□ 0.85
NXF1-214ENST00000533048 PLEKHG3A1L390 1219 aa20.34■□□□□ 0.85
NXF1-214ENST00000533048 MSH6P52701 1360 aa20.34■□□□□ 0.85
NXF1-214ENST00000533048 NPC1L1Q9UHC9 1359 aa20.34■□□□□ 0.85
NXF1-214ENST00000533048 C14orf37Q86TY3 774 aa20.33■□□□□ 0.85
NXF1-214ENST00000533048 TMC1Q8TDI8 760 aa20.33■□□□□ 0.85
NXF1-214ENST00000533048 TERF2IPQ9NYB0 399 aa20.32■□□□□ 0.84
NXF1-214ENST00000533048 CABP1Q9NZU7 370 aa20.32■□□□□ 0.84
NXF1-214ENST00000533048 MST1RQ04912 1400 aa20.32■□□□□ 0.84
NXF1-214ENST00000533048 POLR3AO14802 1390 aaPredicted RBP20.32■□□□□ 0.84
NXF1-214ENST00000533048 NRKQ7Z2Y5 1582 aa20.31■□□□□ 0.84
NXF1-214ENST00000533048 CARD14Q9BXL6 1004 aa20.31■□□□□ 0.84
NXF1-214ENST00000533048 KIF1AQ12756 1690 aa20.3■□□□□ 0.84
NXF1-214ENST00000533048 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
NXF1-214ENST00000533048 NSD3Q9BZ95 1437 aa20.29■□□□□ 0.84
NXF1-214ENST00000533048 CADPS2Q86UW7 1296 aa20.29■□□□□ 0.84
NXF1-214ENST00000533048 HDGFL2Q7Z4V5 671 aaPredicted RBP20.28■□□□□ 0.84
NXF1-214ENST00000533048 KTN1Q86UP2 1357 aaKnown RBP20.28■□□□□ 0.84
NXF1-214ENST00000533048 EDC4Q6P2E9 1401 aaKnown RBP20.27■□□□□ 0.84
NXF1-214ENST00000533048 ATF3P18847 181 aa20.27■□□□□ 0.84
NXF1-214ENST00000533048 AMER1Q5JTC6 1135 aaPredicted RBP20.27■□□□□ 0.84
NXF1-214ENST00000533048 KNSTRNQ9Y448 316 aa20.27■□□□□ 0.84
NXF1-214ENST00000533048 USP6P35125 1406 aa20.26■□□□□ 0.83
NXF1-214ENST00000533048 NSD2O96028 1365 aa20.25■□□□□ 0.83
NXF1-214ENST00000533048 NUTM2FA1L443 756 aa20.25■□□□□ 0.83
NXF1-214ENST00000533048 ZNF692Q9BU19 519 aaPredicted RBP20.25■□□□□ 0.83
NXF1-214ENST00000533048 SSH2Q76I76 1423 aa20.25■□□□□ 0.83
NXF1-214ENST00000533048 ACEP12821 1306 aa20.25■□□□□ 0.83
NXF1-214ENST00000533048 ANP32CO43423 234 aa20.24■□□□□ 0.83
NXF1-214ENST00000533048 PRKRIP1Q9H875 184 aaPredicted RBP20.24■□□□□ 0.83
NXF1-214ENST00000533048 KIF20BQ96Q89 1820 aa20.24■□□□□ 0.83
NXF1-214ENST00000533048 ANKRD26Q9UPS8 1709 aa20.24■□□□□ 0.83
NXF1-214ENST00000533048 PARD3Q8TEW0 1356 aa20.23■□□□□ 0.83
NXF1-214ENST00000533048 BRD4O60885 1362 aaPredicted RBP20.22■□□□□ 0.83
NXF1-214ENST00000533048 PHF8Q9UPP1 1060 aa20.22■□□□□ 0.83
NXF1-214ENST00000533048 IQSEC2Q5JU85 1478 aa20.22■□□□□ 0.83
NXF1-214ENST00000533048 CGNL1Q0VF96 1302 aa20.22■□□□□ 0.83
NXF1-214ENST00000533048 MIER1Q8N108 512 aa20.2■□□□□ 0.82
NXF1-214ENST00000533048 RALBP1Q15311 655 aa20.19■□□□□ 0.82
NXF1-214ENST00000533048 USP54Q70EL1 1684 aa20.19■□□□□ 0.82
NXF1-214ENST00000533048 ESCO1Q5FWF5 840 aa20.18■□□□□ 0.82
NXF1-214ENST00000533048 PMFBP1Q8TBY8 1022 aa20.18■□□□□ 0.82
NXF1-214ENST00000533048 TRPM3Q9HCF6 1732 aaPredicted RBP20.17■□□□□ 0.82
NXF1-214ENST00000533048 NGDNQ8NEJ9 315 aaKnown RBP20.17■□□□□ 0.82
NXF1-214ENST00000533048 ORAI2Q96SN7 254 aa20.17■□□□□ 0.82
NXF1-214ENST00000533048 TTC21AQ8NDW8 1320 aa20.16■□□□□ 0.82
NXF1-214ENST00000533048 FYB1O15117 783 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms