RNA–Protein interactions for RNA: ENST00000532904.5

UBXN1-213, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 2,073 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-213ENST00000532904 PLIN1O60240 522 aa23.62■■□□□ 1.37
UBXN1-213ENST00000532904 NPM2Q86SE8 214 aaKnown RBP23.62■■□□□ 1.37
UBXN1-213ENST00000532904 CRBNQ96SW2 442 aa23.62■■□□□ 1.37
UBXN1-213ENST00000532904 AMER1Q5JTC6 1135 aaPredicted RBP23.61■■□□□ 1.37
UBXN1-213ENST00000532904 PUS7Q96PZ0 661 aaKnown RBP23.61■■□□□ 1.37
UBXN1-213ENST00000532904 TRAK1Q9UPV9 953 aa23.61■■□□□ 1.37
UBXN1-213ENST00000532904 TMEM132EQ6IEE7 984 aa23.6■■□□□ 1.37
UBXN1-213ENST00000532904 A2ML1A8K2U0 1454 aa23.58■■□□□ 1.37
UBXN1-213ENST00000532904 ADAMTS8Q9UP79 889 aa23.57■■□□□ 1.36
UBXN1-213ENST00000532904 NUTM2DQ5VT03 806 aaPredicted RBP23.56■■□□□ 1.36
UBXN1-213ENST00000532904 ZMYM3Q14202 1370 aa23.55■■□□□ 1.36
UBXN1-213ENST00000532904 MLECQ14165 292 aa23.55■■□□□ 1.36
UBXN1-213ENST00000532904 ALKQ9UM73 1620 aa23.54■■□□□ 1.36
UBXN1-213ENST00000532904 PPP2R1AP30153 589 aa23.54■■□□□ 1.36
UBXN1-213ENST00000532904 ESF1Q9H501 851 aaKnown RBP23.54■■□□□ 1.36
UBXN1-213ENST00000532904 STAG3Q9UJ98 1225 aa23.53■■□□□ 1.36
UBXN1-213ENST00000532904 KDM2BQ8NHM5 1336 aa23.51■■□□□ 1.35
UBXN1-213ENST00000532904 PLEKHH1Q9ULM0 1364 aa23.51■■□□□ 1.35
UBXN1-213ENST00000532904 USP35Q9P2H5 1018 aa23.51■■□□□ 1.35
UBXN1-213ENST00000532904 ZNF521Q96K83 1311 aa23.51■■□□□ 1.35
UBXN1-213ENST00000532904 DUSP27Q5VZP5 1158 aa23.5■■□□□ 1.35
UBXN1-213ENST00000532904 EVC2Q86UK5 1308 aa23.5■■□□□ 1.35
UBXN1-213ENST00000532904 TULP4Q9NRJ4 1543 aa23.5■■□□□ 1.35
UBXN1-213ENST00000532904 RIMS2Q9UQ26 1411 aa23.5■■□□□ 1.35
UBXN1-213ENST00000532904 WDR43Q15061 677 aaKnown RBP eCLIP23.5■■□□□ 1.35
UBXN1-213ENST00000532904 C20orf194Q5TEA3 1177 aa23.5■■□□□ 1.35
UBXN1-213ENST00000532904 USP32Q8NFA0 1604 aa23.49■■□□□ 1.35
UBXN1-213ENST00000532904 PTPRMP28827 1452 aa23.49■■□□□ 1.35
UBXN1-213ENST00000532904 YTHDC2Q9H6S0 1430 aaKnown RBP23.49■■□□□ 1.35
UBXN1-213ENST00000532904 DDRGK1Q96HY6 314 aa23.48■■□□□ 1.35
UBXN1-213ENST00000532904 SETD1AO15047 1707 aaKnown RBP23.48■■□□□ 1.35
UBXN1-213ENST00000532904 CARD14Q9BXL6 1004 aa23.47■■□□□ 1.35
UBXN1-213ENST00000532904 PPM1GO15355 546 aaPredicted RBP23.46■■□□□ 1.35
UBXN1-213ENST00000532904 CENPQQ7L2Z9 268 aaPredicted RBP23.46■■□□□ 1.35
UBXN1-213ENST00000532904 DLC1Q96QB1 1528 aa23.45■■□□□ 1.34
UBXN1-213ENST00000532904 GOLGA2Q08379 1002 aa23.45■■□□□ 1.34
UBXN1-213ENST00000532904 SKAP1Q86WV1 359 aa23.45■■□□□ 1.34
UBXN1-213ENST00000532904 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.45■■□□□ 1.34
UBXN1-213ENST00000532904 LAS1LQ9Y4W2 734 aaKnown RBP23.45■■□□□ 1.34
UBXN1-213ENST00000532904 TNRQ92752 1358 aa23.45■■□□□ 1.34
UBXN1-213ENST00000532904 NINLQ9Y2I6 1382 aa23.44■■□□□ 1.34
UBXN1-213ENST00000532904 NEFMP07197 916 aa23.43■■□□□ 1.34
UBXN1-213ENST00000532904 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.42■■□□□ 1.34
UBXN1-213ENST00000532904 UBR1Q8IWV7 1749 aa23.4■■□□□ 1.34
UBXN1-213ENST00000532904 NRXN3Q9Y4C0 1643 aa23.4■■□□□ 1.34
UBXN1-213ENST00000532904 HDGFP51858 240 aaKnown RBP23.4■■□□□ 1.34
UBXN1-213ENST00000532904 SLFN5Q08AF3 891 aa23.4■■□□□ 1.34
UBXN1-213ENST00000532904 NSD3Q9BZ95 1437 aa23.4■■□□□ 1.34
UBXN1-213ENST00000532904 TRMT2AQ8IZ69 625 aaKnown RBP23.39■■□□□ 1.34
UBXN1-213ENST00000532904 SLC12A5Q9H2X9 1139 aa23.39■■□□□ 1.34
UBXN1-213ENST00000532904 ANKRD36BQ8N2N9 1353 aa23.39■■□□□ 1.33
UBXN1-213ENST00000532904 STK26Q9P289 416 aa23.38■■□□□ 1.33
UBXN1-213ENST00000532904 ATAD2Q6PL18 1390 aa23.37■■□□□ 1.33
UBXN1-213ENST00000532904 NLRP1Q9C000 1473 aa23.36■■□□□ 1.33
UBXN1-213ENST00000532904 ABCC11Q96J66 1382 aa23.36■■□□□ 1.33
UBXN1-213ENST00000532904 PRAM1Q96QH2 718 aa23.36■■□□□ 1.33
UBXN1-213ENST00000532904 NSD2O96028 1365 aa23.35■■□□□ 1.33
UBXN1-213ENST00000532904 POGKQ9P215 609 aa23.34■■□□□ 1.33
UBXN1-213ENST00000532904 FAM161AQ3B820 660 aa23.34■■□□□ 1.33
UBXN1-213ENST00000532904 KNDC1Q76NI1 1749 aa23.34■■□□□ 1.33
UBXN1-213ENST00000532904 CGNL1Q0VF96 1302 aa23.33■■□□□ 1.33
UBXN1-213ENST00000532904 TMEM2Q9UHN6 1383 aa23.32■■□□□ 1.32
UBXN1-213ENST00000532904 NKTRP30414 1462 aaKnown RBP23.32■■□□□ 1.32
UBXN1-213ENST00000532904 C8orf34Q49A92 452 aa23.31■■□□□ 1.32
UBXN1-213ENST00000532904 CABP2Q9NPB3 220 aa23.31■■□□□ 1.32
UBXN1-213ENST00000532904 C3P01024 1663 aa23.31■■□□□ 1.32
UBXN1-213ENST00000532904 POLR3AO14802 1390 aaPredicted RBP23.31■■□□□ 1.32
UBXN1-213ENST00000532904 FER1L4A9Z1Z3 1794 aa23.31■■□□□ 1.32
UBXN1-213ENST00000532904 SAFB2Q14151 953 aaKnown RBP eCLIP23.3■■□□□ 1.32
UBXN1-213ENST00000532904 CCDC146Q8IYE0 955 aa23.29■■□□□ 1.32
UBXN1-213ENST00000532904 TECPR2O15040 1411 aa23.28■■□□□ 1.32
UBXN1-213ENST00000532904 SRPK2P78362 688 aaKnown RBP23.28■■□□□ 1.32
UBXN1-213ENST00000532904 NGEFQ8N5V2 710 aa23.28■■□□□ 1.32
UBXN1-213ENST00000532904 SIRT1Q96EB6 747 aa23.28■■□□□ 1.32
UBXN1-213ENST00000532904 MINK1Q8N4C8 1332 aaPredicted RBP23.28■■□□□ 1.32
UBXN1-213ENST00000532904 APAF1O14727 1248 aa23.27■■□□□ 1.32
UBXN1-213ENST00000532904 MORC1Q86VD1 984 aa23.27■■□□□ 1.32
UBXN1-213ENST00000532904 SPINK5Q9NQ38 1064 aaPredicted RBP23.27■■□□□ 1.32
UBXN1-213ENST00000532904 E9PSI1 815 aa23.26■■□□□ 1.31
UBXN1-213ENST00000532904 FAM135BQ49AJ0 1406 aa23.26■■□□□ 1.31
UBXN1-213ENST00000532904 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
UBXN1-213ENST00000532904 TRHP20396 242 aaPredicted RBP23.25■■□□□ 1.31
UBXN1-213ENST00000532904 A0A1W2PP64 1363 aa23.25■■□□□ 1.31
UBXN1-213ENST00000532904 CPS1P31327 1500 aa23.25■■□□□ 1.31
UBXN1-213ENST00000532904 TERF2IPQ9NYB0 399 aa23.24■■□□□ 1.31
UBXN1-213ENST00000532904 METP08581 1390 aa23.24■■□□□ 1.31
UBXN1-213ENST00000532904 ANKRD26Q9UPS8 1709 aa23.24■■□□□ 1.31
UBXN1-213ENST00000532904 CDK19Q9BWU1 502 aa23.23■■□□□ 1.31
UBXN1-213ENST00000532904 MED14O60244 1454 aa23.23■■□□□ 1.31
UBXN1-213ENST00000532904 CD163L1Q9NR16 1453 aa23.23■■□□□ 1.31
UBXN1-213ENST00000532904 PLEKHG1Q9ULL1 1385 aa23.22■■□□□ 1.31
UBXN1-213ENST00000532904 DAXXQ9UER7 740 aaPredicted RBP23.22■■□□□ 1.31
UBXN1-213ENST00000532904 SLIT1O75093 1534 aa23.22■■□□□ 1.31
UBXN1-213ENST00000532904 NFKBIBQ15653 356 aa23.21■■□□□ 1.31
UBXN1-213ENST00000532904 SHPRHQ149N8 1683 aa23.21■■□□□ 1.31
UBXN1-213ENST00000532904 BCAR3O75815 825 aa23.21■■□□□ 1.31
UBXN1-213ENST00000532904 ARHGAP23Q9P227 1491 aa23.2■■□□□ 1.3
UBXN1-213ENST00000532904 SLC4A3P48751 1232 aa23.2■■□□□ 1.3
UBXN1-213ENST00000532904 ADAMTS13Q76LX8 1427 aa23.2■■□□□ 1.3
UBXN1-213ENST00000532904 ATP7BP35670 1465 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms