RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 TRAK1Q9UPV9 953 aa20.12■□□□□ 0.81
TSPAN4-220ENST00000532375 PRAM1Q96QH2 718 aa20.11■□□□□ 0.81
TSPAN4-220ENST00000532375 BRINP3Q76B58 766 aa20.1■□□□□ 0.81
TSPAN4-220ENST00000532375 CDC42BPGQ6DT37 1551 aa20.09■□□□□ 0.81
TSPAN4-220ENST00000532375 C1orf167Q5SNV9 1468 aa20.09■□□□□ 0.81
TSPAN4-220ENST00000532375 TRPM1Q7Z4N2 1603 aa20.09■□□□□ 0.81
TSPAN4-220ENST00000532375 ARHGEF28Q8N1W1 1705 aaKnown RBP20.08■□□□□ 0.81
TSPAN4-220ENST00000532375 CLSPNQ9HAW4 1339 aa20.06■□□□□ 0.8
TSPAN4-220ENST00000532375 SAFB2Q14151 953 aaKnown RBP eCLIP20.05■□□□□ 0.8
TSPAN4-220ENST00000532375 TONSLQ96HA7 1378 aa20.05■□□□□ 0.8
TSPAN4-220ENST00000532375 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
TSPAN4-220ENST00000532375 ORAI2Q96SN7 254 aa20.04■□□□□ 0.8
TSPAN4-220ENST00000532375 POGKQ9P215 609 aa20.04■□□□□ 0.8
TSPAN4-220ENST00000532375 AHDC1Q5TGY3 1603 aaPredicted RBP20.04■□□□□ 0.8
TSPAN4-220ENST00000532375 COL16A1Q07092 1604 aaPredicted RBP20.02■□□□□ 0.8
TSPAN4-220ENST00000532375 ADGRB2O60241 1585 aa20.02■□□□□ 0.8
TSPAN4-220ENST00000532375 PHLPP1O60346 1717 aa20.02■□□□□ 0.79
TSPAN4-220ENST00000532375 NHSL1Q5SYE7 1610 aa20.02■□□□□ 0.79
TSPAN4-220ENST00000532375 GPRASP1Q5JY77 1395 aa20.01■□□□□ 0.79
TSPAN4-220ENST00000532375 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
TSPAN4-220ENST00000532375 NUTM2FA1L443 756 aa19.99■□□□□ 0.79
TSPAN4-220ENST00000532375 DDX17Q92841 729 aaKnown RBP19.99■□□□□ 0.79
TSPAN4-220ENST00000532375 MINK1Q8N4C8 1332 aaPredicted RBP19.99■□□□□ 0.79
TSPAN4-220ENST00000532375 HIRIP3Q9BW71 556 aaPredicted RBP19.98■□□□□ 0.79
TSPAN4-220ENST00000532375 USP32Q8NFA0 1604 aa19.98■□□□□ 0.79
TSPAN4-220ENST00000532375 WASLO00401 505 aaPredicted RBP19.96■□□□□ 0.79
TSPAN4-220ENST00000532375 TIMELESSQ9UNS1 1208 aa19.96■□□□□ 0.79
TSPAN4-220ENST00000532375 RALGAPBQ86X10 1494 aa19.96■□□□□ 0.79
TSPAN4-220ENST00000532375 ROCK2O75116 1388 aaKnown RBP19.95■□□□□ 0.79
TSPAN4-220ENST00000532375 DISP3Q9P2K9 1392 aa19.95■□□□□ 0.79
TSPAN4-220ENST00000532375 ESCO1Q5FWF5 840 aa19.95■□□□□ 0.78
TSPAN4-220ENST00000532375 SOS2Q07890 1332 aaPredicted RBP19.95■□□□□ 0.78
TSPAN4-220ENST00000532375 PRR36Q9H6K5 1346 aa19.95■□□□□ 0.78
TSPAN4-220ENST00000532375 CCER1Q8TC90 406 aaPredicted RBP19.94■□□□□ 0.78
TSPAN4-220ENST00000532375 SOCS7O14512 581 aa19.93■□□□□ 0.78
TSPAN4-220ENST00000532375 CENPJQ9HC77 1338 aaPredicted RBP19.93■□□□□ 0.78
TSPAN4-220ENST00000532375 ANKARQ7Z5J8 1434 aa19.93■□□□□ 0.78
TSPAN4-220ENST00000532375 JCADQ9P266 1359 aa19.92■□□□□ 0.78
TSPAN4-220ENST00000532375 ILDR2Q71H61 639 aa19.91■□□□□ 0.78
TSPAN4-220ENST00000532375 FOXO3O43524 673 aa19.9■□□□□ 0.78
TSPAN4-220ENST00000532375 CDK19Q9BWU1 502 aa19.9■□□□□ 0.78
TSPAN4-220ENST00000532375 TULP4Q9NRJ4 1543 aa19.9■□□□□ 0.78
TSPAN4-220ENST00000532375 QRICH2Q9H0J4 1663 aa19.9■□□□□ 0.78
TSPAN4-220ENST00000532375 MED1Q15648 1581 aaPredicted RBP19.89■□□□□ 0.77
TSPAN4-220ENST00000532375 PXDNQ92626 1479 aa19.89■□□□□ 0.77
TSPAN4-220ENST00000532375 CARD11Q9BXL7 1154 aa19.89■□□□□ 0.77
TSPAN4-220ENST00000532375 PHF8Q9UPP1 1060 aa19.89■□□□□ 0.77
TSPAN4-220ENST00000532375 SHPRHQ149N8 1683 aa19.88■□□□□ 0.77
TSPAN4-220ENST00000532375 LRRC59Q96AG4 307 aaKnown RBP19.88■□□□□ 0.77
TSPAN4-220ENST00000532375 KIF1AQ12756 1690 aa19.87■□□□□ 0.77
TSPAN4-220ENST00000532375 ATP7BP35670 1465 aa19.87■□□□□ 0.77
TSPAN4-220ENST00000532375 NPHP3Q7Z494 1330 aa19.87■□□□□ 0.77
TSPAN4-220ENST00000532375 NUDT16Q96DE0 195 aaKnown RBP19.86■□□□□ 0.77
TSPAN4-220ENST00000532375 EIF3AQ14152 1382 aaKnown RBP19.85■□□□□ 0.77
TSPAN4-220ENST00000532375 PNPLA6Q8IY17 1366 aa19.84■□□□□ 0.77
TSPAN4-220ENST00000532375 XPCQ01831 940 aaPredicted RBP19.84■□□□□ 0.77
TSPAN4-220ENST00000532375 PMFBP1Q8TBY8 1022 aa19.84■□□□□ 0.77
TSPAN4-220ENST00000532375 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.76
TSPAN4-220ENST00000532375 SPATA31A6Q5VVP1 1343 aa19.82■□□□□ 0.76
TSPAN4-220ENST00000532375 TOPAZ1Q8N9V7 1692 aa19.82■□□□□ 0.76
TSPAN4-220ENST00000532375 KRT28Q7Z3Y7 464 aa19.82■□□□□ 0.76
TSPAN4-220ENST00000532375 LRP6O75581 1613 aa19.82■□□□□ 0.76
TSPAN4-220ENST00000532375 CABP2Q9NPB3 220 aa19.81■□□□□ 0.76
TSPAN4-220ENST00000532375 CCDC61Q9Y6R9 512 aa19.81■□□□□ 0.76
TSPAN4-220ENST00000532375 ITSN1Q15811 1721 aa19.8■□□□□ 0.76
TSPAN4-220ENST00000532375 PLEKHG3A1L390 1219 aa19.8■□□□□ 0.76
TSPAN4-220ENST00000532375 SPATA31A3Q5VYP0 1347 aa19.79■□□□□ 0.76
TSPAN4-220ENST00000532375 TESK2Q96S53 571 aa19.79■□□□□ 0.76
TSPAN4-220ENST00000532375 RGS17Q9UGC6 210 aaPredicted RBP19.79■□□□□ 0.76
TSPAN4-220ENST00000532375 COL22A1Q8NFW1 1626 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-220ENST00000532375 TRPM3Q9HCF6 1732 aaPredicted RBP19.78■□□□□ 0.76
TSPAN4-220ENST00000532375 POLR3AO14802 1390 aaPredicted RBP19.77■□□□□ 0.76
TSPAN4-220ENST00000532375 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
TSPAN4-220ENST00000532375 SBNO1A3KN83 1393 aa19.76■□□□□ 0.75
TSPAN4-220ENST00000532375 ST20-MTHFSA0A0A6YYL1 179 aa19.76■□□□□ 0.75
TSPAN4-220ENST00000532375 SRPK2P78362 688 aaKnown RBP19.76■□□□□ 0.75
TSPAN4-220ENST00000532375 PSME1Q06323 249 aa19.76■□□□□ 0.75
TSPAN4-220ENST00000532375 ACEP12821 1306 aa19.74■□□□□ 0.75
TSPAN4-220ENST00000532375 NGDNQ8NEJ9 315 aaKnown RBP19.73■□□□□ 0.75
TSPAN4-220ENST00000532375 TNS3Q68CZ2 1445 aa19.73■□□□□ 0.75
TSPAN4-220ENST00000532375 PPIP5K1Q6PFW1 1433 aa19.73■□□□□ 0.75
TSPAN4-220ENST00000532375 USP47Q96K76 1375 aa19.72■□□□□ 0.75
TSPAN4-220ENST00000532375 ALS2Q96Q42 1657 aa19.72■□□□□ 0.75
TSPAN4-220ENST00000532375 NUTM2BA6NNL0 878 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-220ENST00000532375 NUTM2EB1AL46 878 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-220ENST00000532375 NUTM2AQ8IVF1 878 aaPredicted RBP19.72■□□□□ 0.75
TSPAN4-220ENST00000532375 CABP1Q9NZU7 370 aa19.72■□□□□ 0.75
TSPAN4-220ENST00000532375 PUS7Q96PZ0 661 aaKnown RBP19.69■□□□□ 0.74
TSPAN4-220ENST00000532375 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
TSPAN4-220ENST00000532375 SSH2Q76I76 1423 aa19.67■□□□□ 0.74
TSPAN4-220ENST00000532375 PHF23Q9BUL5 403 aaPredicted RBP19.66■□□□□ 0.74
TSPAN4-220ENST00000532375 ARHGEF10O15013 1369 aa19.66■□□□□ 0.74
TSPAN4-220ENST00000532375 ADAMTS2O95450 1211 aa19.65■□□□□ 0.74
TSPAN4-220ENST00000532375 POTEAQ6S8J7 498 aa19.65■□□□□ 0.74
TSPAN4-220ENST00000532375 CABLES1Q8TDN4 633 aa19.65■□□□□ 0.74
TSPAN4-220ENST00000532375 CPSF1Q10570 1443 aaKnown RBP19.65■□□□□ 0.74
TSPAN4-220ENST00000532375 CD163L1Q9NR16 1453 aa19.64■□□□□ 0.73
TSPAN4-220ENST00000532375 ABCA3Q99758 1704 aa19.64■□□□□ 0.73
TSPAN4-220ENST00000532375 MARF1Q9Y4F3 1742 aaKnown RBP19.64■□□□□ 0.73
TSPAN4-220ENST00000532375 CRYBG1Q9Y4K1 1723 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms