RNA–Protein interactions for RNA: ENST00000531598.6

NPIPA3-202, Transcript of nuclear pore complex interacting protein family member A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NPIPA3, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3-202ENST00000531598 ANKRD36BQ8N2N9 1353 aa12.96□□□□□ -0.33
NPIPA3-202ENST00000531598 USP32Q8NFA0 1604 aa12.96□□□□□ -0.33
NPIPA3-202ENST00000531598 CC2D1BQ5T0F9 858 aaKnown RBP12.96□□□□□ -0.33
NPIPA3-202ENST00000531598 EID1Q9Y6B2 187 aa12.96□□□□□ -0.33
NPIPA3-202ENST00000531598 TECPR2O15040 1411 aa12.96□□□□□ -0.34
NPIPA3-202ENST00000531598 DNAJC5Q9H3Z4 198 aa12.95□□□□□ -0.34
NPIPA3-202ENST00000531598 TERF2IPQ9NYB0 399 aa12.95□□□□□ -0.34
NPIPA3-202ENST00000531598 PLEKHG1Q9ULL1 1385 aa12.94□□□□□ -0.34
NPIPA3-202ENST00000531598 PPP2R1AP30153 589 aa12.94□□□□□ -0.34
NPIPA3-202ENST00000531598 THEMISQ8N1K5 641 aaPredicted RBP12.94□□□□□ -0.34
NPIPA3-202ENST00000531598 NUTM2DQ5VT03 806 aaPredicted RBP12.93□□□□□ -0.34
NPIPA3-202ENST00000531598 SLIT1O75093 1534 aa12.93□□□□□ -0.34
NPIPA3-202ENST00000531598 TULP4Q9NRJ4 1543 aa12.93□□□□□ -0.34
NPIPA3-202ENST00000531598 MYO5BQ9ULV0 1848 aa12.92□□□□□ -0.34
NPIPA3-202ENST00000531598 WDR43Q15061 677 aaKnown RBP eCLIP12.92□□□□□ -0.34
NPIPA3-202ENST00000531598 SMG6Q86US8 1419 aaKnown RBP12.92□□□□□ -0.34
NPIPA3-202ENST00000531598 PRAM1Q96QH2 718 aa12.92□□□□□ -0.34
NPIPA3-202ENST00000531598 UBR1Q8IWV7 1749 aa12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 BLMP54132 1417 aaPredicted RBP12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 SRPK2P78362 688 aaKnown RBP12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 HDGFL2Q7Z4V5 671 aaPredicted RBP12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 STK26Q9P289 416 aa12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 MED14O60244 1454 aa12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 ARHGAP23Q9P227 1491 aa12.91□□□□□ -0.34
NPIPA3-202ENST00000531598 DIP2AQ14689 1571 aa12.9□□□□□ -0.34
NPIPA3-202ENST00000531598 DCAF8L1A6NGE4 600 aa12.9□□□□□ -0.34
NPIPA3-202ENST00000531598 POLR3AO14802 1390 aaPredicted RBP12.9□□□□□ -0.34
NPIPA3-202ENST00000531598 KNDC1Q76NI1 1749 aa12.9□□□□□ -0.34
NPIPA3-202ENST00000531598 FER1L4A9Z1Z3 1794 aa12.89□□□□□ -0.35
NPIPA3-202ENST00000531598 CNGB1Q14028 1251 aaPredicted RBP12.89□□□□□ -0.35
NPIPA3-202ENST00000531598 MORC1Q86VD1 984 aa12.89□□□□□ -0.35
NPIPA3-202ENST00000531598 CFAP53Q96M91 514 aa12.89□□□□□ -0.35
NPIPA3-202ENST00000531598 NUDCQ9Y266 331 aa12.89□□□□□ -0.35
NPIPA3-202ENST00000531598 CPS1P31327 1500 aa12.88□□□□□ -0.35
NPIPA3-202ENST00000531598 CARD14Q9BXL6 1004 aa12.88□□□□□ -0.35
NPIPA3-202ENST00000531598 TBX22Q9Y458 520 aa12.88□□□□□ -0.35
NPIPA3-202ENST00000531598 SUPT16HQ9Y5B9 1047 aaKnown RBP12.88□□□□□ -0.35
NPIPA3-202ENST00000531598 PIK3R4Q99570 1358 aa12.88□□□□□ -0.35
NPIPA3-202ENST00000531598 ATP7BP35670 1465 aa12.88□□□□□ -0.35
NPIPA3-202ENST00000531598 SETD1AO15047 1707 aaKnown RBP12.88□□□□□ -0.35
NPIPA3-202ENST00000531598 C3P01024 1663 aa12.87□□□□□ -0.35
NPIPA3-202ENST00000531598 TXNDC2Q86VQ3 553 aa12.87□□□□□ -0.35
NPIPA3-202ENST00000531598 BCANQ96GW7 911 aa12.87□□□□□ -0.35
NPIPA3-202ENST00000531598 SLC12A5Q9H2X9 1139 aa12.87□□□□□ -0.35
NPIPA3-202ENST00000531598 NRXN3Q9Y4C0 1643 aa12.87□□□□□ -0.35
NPIPA3-202ENST00000531598 NCBP3Q53F19 620 aaKnown RBP12.86□□□□□ -0.35
NPIPA3-202ENST00000531598 CDK19Q9BWU1 502 aa12.86□□□□□ -0.35
NPIPA3-202ENST00000531598 MINK1Q8N4C8 1332 aaPredicted RBP12.86□□□□□ -0.35
NPIPA3-202ENST00000531598 CABP2Q9NPB3 220 aa12.85□□□□□ -0.35
NPIPA3-202ENST00000531598 ADAMTS13Q76LX8 1427 aa12.85□□□□□ -0.35
NPIPA3-202ENST00000531598 METP08581 1390 aa12.84□□□□□ -0.35
NPIPA3-202ENST00000531598 WASLO00401 505 aaPredicted RBP12.84□□□□□ -0.35
NPIPA3-202ENST00000531598 PTCH1Q13635 1447 aa12.83□□□□□ -0.36
NPIPA3-202ENST00000531598 A0A1W2PP64 1363 aa12.82□□□□□ -0.36
NPIPA3-202ENST00000531598 ADGRB2O60241 1585 aa12.82□□□□□ -0.36
NPIPA3-202ENST00000531598 SAFB2Q14151 953 aaKnown RBP eCLIP12.82□□□□□ -0.36
NPIPA3-202ENST00000531598 FKBP8Q14318 412 aa12.82□□□□□ -0.36
NPIPA3-202ENST00000531598 ZNF692Q9BU19 519 aaPredicted RBP12.82□□□□□ -0.36
NPIPA3-202ENST00000531598 PNNQ9H307 717 aaKnown RBP12.81□□□□□ -0.36
NPIPA3-202ENST00000531598 CCDC61Q9Y6R9 512 aa12.81□□□□□ -0.36
NPIPA3-202ENST00000531598 CEP170BQ9Y4F5 1589 aaPredicted RBP12.81□□□□□ -0.36
NPIPA3-202ENST00000531598 CEBPAP49715 358 aaPredicted RBP12.8□□□□□ -0.36
NPIPA3-202ENST00000531598 CNKSR2Q8WXI2 1034 aa12.8□□□□□ -0.36
NPIPA3-202ENST00000531598 EDC4Q6P2E9 1401 aaKnown RBP12.79□□□□□ -0.36
NPIPA3-202ENST00000531598 LTKP29376 864 aa12.79□□□□□ -0.36
NPIPA3-202ENST00000531598 ADAMTS8Q9UP79 889 aa12.79□□□□□ -0.36
NPIPA3-202ENST00000531598 ADAMTSL3P82987 1691 aa12.78□□□□□ -0.36
NPIPA3-202ENST00000531598 WAPLQ7Z5K2 1190 aa12.78□□□□□ -0.36
NPIPA3-202ENST00000531598 ANKLE2Q86XL3 938 aa12.78□□□□□ -0.36
NPIPA3-202ENST00000531598 RNF123Q5XPI4 1314 aa12.78□□□□□ -0.36
NPIPA3-202ENST00000531598 CPSF1Q10570 1443 aaKnown RBP12.78□□□□□ -0.36
NPIPA3-202ENST00000531598 ZNF142P52746 1687 aaPredicted RBP12.77□□□□□ -0.36
NPIPA3-202ENST00000531598 HOXD11P31277 338 aaPredicted RBP12.77□□□□□ -0.37
NPIPA3-202ENST00000531598 CABP1Q9NZU7 370 aa12.77□□□□□ -0.37
NPIPA3-202ENST00000531598 PPIP5K1Q6PFW1 1433 aa12.77□□□□□ -0.37
NPIPA3-202ENST00000531598 CD163L1Q9NR16 1453 aa12.77□□□□□ -0.37
NPIPA3-202ENST00000531598 NUDT16Q96DE0 195 aaKnown RBP12.76□□□□□ -0.37
NPIPA3-202ENST00000531598 PLEKHH1Q9ULM0 1364 aa12.76□□□□□ -0.37
NPIPA3-202ENST00000531598 CDC42BPGQ6DT37 1551 aa12.76□□□□□ -0.37
NPIPA3-202ENST00000531598 ROBO2Q9HCK4 1378 aa12.75□□□□□ -0.37
NPIPA3-202ENST00000531598 ANKRD26Q9UPS8 1709 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 ANKARQ7Z5J8 1434 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 PLEKHG3A1L390 1219 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 FYB1O15117 783 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 MTHFSP49914 203 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 GOLGA2Q08379 1002 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 RUNDC1Q96C34 613 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 PPP4R2Q9NY27 417 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 AMOTL2Q9Y2J4 779 aa12.74□□□□□ -0.37
NPIPA3-202ENST00000531598 AATKQ6ZMQ8 1374 aa12.73□□□□□ -0.37
NPIPA3-202ENST00000531598 CACNB1Q02641 598 aaPredicted RBP12.73□□□□□ -0.37
NPIPA3-202ENST00000531598 ZNF521Q96K83 1311 aa12.72□□□□□ -0.37
NPIPA3-202ENST00000531598 E9PSI1 815 aa12.72□□□□□ -0.37
NPIPA3-202ENST00000531598 CCDC27Q2M243 656 aa12.72□□□□□ -0.37
NPIPA3-202ENST00000531598 PNPLA6Q8IY17 1366 aa12.71□□□□□ -0.37
NPIPA3-202ENST00000531598 SLC26A8Q96RN1 970 aa12.71□□□□□ -0.37
NPIPA3-202ENST00000531598 RCAN3Q9UKA8 241 aa12.71□□□□□ -0.37
NPIPA3-202ENST00000531598 TTC21AQ8NDW8 1320 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms