RNA–Protein interactions for RNA: ENST00000531597.1

PACS1-212, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-212ENST00000531597 FOXD1Q16676 465 aa22.71■■□□□ 1.23
PACS1-212ENST00000531597 CCDC125Q86Z20 511 aa22.7■■□□□ 1.22
PACS1-212ENST00000531597 KIF1BO60333 1816 aa22.68■■□□□ 1.22
PACS1-212ENST00000531597 HFM1A2PYH4 1435 aa22.68■■□□□ 1.22
PACS1-212ENST00000531597 ESCO1Q5FWF5 840 aa22.67■■□□□ 1.22
PACS1-212ENST00000531597 GJD4Q96KN9 370 aaPredicted RBP22.67■■□□□ 1.22
PACS1-212ENST00000531597 PXDNQ92626 1479 aa22.66■■□□□ 1.22
PACS1-212ENST00000531597 NPHP3Q7Z494 1330 aa22.66■■□□□ 1.22
PACS1-212ENST00000531597 XPCQ01831 940 aaPredicted RBP22.64■■□□□ 1.21
PACS1-212ENST00000531597 RPGRIP1LQ68CZ1 1315 aa22.63■■□□□ 1.21
PACS1-212ENST00000531597 FOXO3O43524 673 aa22.63■■□□□ 1.21
PACS1-212ENST00000531597 PPARGC1BQ86YN6 1023 aaKnown RBP22.62■■□□□ 1.21
PACS1-212ENST00000531597 MARF1Q9Y4F3 1742 aaKnown RBP22.62■■□□□ 1.21
PACS1-212ENST00000531597 CDC42BPGQ6DT37 1551 aa22.61■■□□□ 1.21
PACS1-212ENST00000531597 NAIPQ13075 1403 aa22.58■■□□□ 1.21
PACS1-212ENST00000531597 UNC5CLQ8IV45 518 aa22.58■■□□□ 1.21
PACS1-212ENST00000531597 RALGAPBQ86X10 1494 aa22.57■■□□□ 1.2
PACS1-212ENST00000531597 GLI3P10071 1580 aa22.57■■□□□ 1.2
PACS1-212ENST00000531597 SLIT2O94813 1529 aa22.57■■□□□ 1.2
PACS1-212ENST00000531597 BLMP54132 1417 aaPredicted RBP22.57■■□□□ 1.2
PACS1-212ENST00000531597 PPLO60437 1756 aa22.56■■□□□ 1.2
PACS1-212ENST00000531597 LRPPRCP42704 1394 aaKnown RBP22.56■■□□□ 1.2
PACS1-212ENST00000531597 NUTM2FA1L443 756 aa22.56■■□□□ 1.2
PACS1-212ENST00000531597 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.55■■□□□ 1.2
PACS1-212ENST00000531597 WAPLQ7Z5K2 1190 aa22.55■■□□□ 1.2
PACS1-212ENST00000531597 DEFB132Q7Z7B7 95 aa22.54■■□□□ 1.2
PACS1-212ENST00000531597 SPATA31A3Q5VYP0 1347 aa22.53■■□□□ 1.2
PACS1-212ENST00000531597 ADGRF5Q8IZF2 1346 aa22.53■■□□□ 1.2
PACS1-212ENST00000531597 STK26Q9P289 416 aa22.52■■□□□ 1.2
PACS1-212ENST00000531597 TECPR2O15040 1411 aa22.51■■□□□ 1.19
PACS1-212ENST00000531597 PLEKHH1Q9ULM0 1364 aa22.5■■□□□ 1.19
PACS1-212ENST00000531597 SEPT12Q8IYM1 358 aa22.49■■□□□ 1.19
PACS1-212ENST00000531597 SLC4A1APQ9BWU0 796 aaKnown RBP22.49■■□□□ 1.19
PACS1-212ENST00000531597 BRWD3Q6RI45 1802 aa22.49■■□□□ 1.19
PACS1-212ENST00000531597 KRT28Q7Z3Y7 464 aa22.47■■□□□ 1.19
PACS1-212ENST00000531597 ABCC11Q96J66 1382 aa22.47■■□□□ 1.19
PACS1-212ENST00000531597 USP32Q8NFA0 1604 aa22.46■■□□□ 1.19
PACS1-212ENST00000531597 ONECUT3O60422 494 aaPredicted RBP22.46■■□□□ 1.19
PACS1-212ENST00000531597 VPS72Q15906 364 aa22.46■■□□□ 1.19
PACS1-212ENST00000531597 TMEM132EQ6IEE7 984 aa22.46■■□□□ 1.19
PACS1-212ENST00000531597 RRBP1Q9P2E9 1410 aaKnown RBP22.46■■□□□ 1.19
PACS1-212ENST00000531597 CCDC144AA2RUR9 1427 aa22.45■■□□□ 1.18
PACS1-212ENST00000531597 SF3B2Q13435 895 aaKnown RBP22.44■■□□□ 1.18
PACS1-212ENST00000531597 FMN2Q9NZ56 1722 aa22.44■■□□□ 1.18
PACS1-212ENST00000531597 CABLES1Q8TDN4 633 aa22.43■■□□□ 1.18
PACS1-212ENST00000531597 RGL3Q3MIN7 710 aa22.42■■□□□ 1.18
PACS1-212ENST00000531597 KIF1AQ12756 1690 aa22.42■■□□□ 1.18
PACS1-212ENST00000531597 KRT27Q7Z3Y8 459 aa22.41■■□□□ 1.18
PACS1-212ENST00000531597 LRP5O75197 1615 aa22.41■■□□□ 1.18
PACS1-212ENST00000531597 SPATA31E1Q6ZUB1 1445 aa22.4■■□□□ 1.18
PACS1-212ENST00000531597 KNDC1Q76NI1 1749 aa22.4■■□□□ 1.18
PACS1-212ENST00000531597 TNS3Q68CZ2 1445 aa22.4■■□□□ 1.18
PACS1-212ENST00000531597 HAP1P54257 671 aaPredicted RBP22.39■■□□□ 1.17
PACS1-212ENST00000531597 PHF8Q9UPP1 1060 aa22.39■■□□□ 1.17
PACS1-212ENST00000531597 YTHDC2Q9H6S0 1430 aaKnown RBP22.39■■□□□ 1.17
PACS1-212ENST00000531597 ANKRD30BQ9BXX2 1392 aa22.38■■□□□ 1.17
PACS1-212ENST00000531597 PLEKHG5O94827 1062 aa22.38■■□□□ 1.17
PACS1-212ENST00000531597 CCDC9Q9Y3X0 531 aaKnown RBP22.38■■□□□ 1.17
PACS1-212ENST00000531597 PLCH1Q4KWH8 1693 aa22.37■■□□□ 1.17
PACS1-212ENST00000531597 FAM83GA6ND36 823 aa22.37■■□□□ 1.17
PACS1-212ENST00000531597 PSME1Q06323 249 aa22.37■■□□□ 1.17
PACS1-212ENST00000531597 SIRT1Q96EB6 747 aa22.37■■□□□ 1.17
PACS1-212ENST00000531597 PIK3C2GO75747 1445 aa22.37■■□□□ 1.17
PACS1-212ENST00000531597 PSDA5PKW4 1024 aaPredicted RBP22.36■■□□□ 1.17
PACS1-212ENST00000531597 IFT172Q9UG01 1749 aa22.36■■□□□ 1.17
PACS1-212ENST00000531597 NWD2Q9ULI1 1742 aa22.36■■□□□ 1.17
PACS1-212ENST00000531597 SBNO1A3KN83 1393 aa22.36■■□□□ 1.17
PACS1-212ENST00000531597 RGPD8O14715 1765 aaPredicted RBP22.35■■□□□ 1.17
PACS1-212ENST00000531597 HRCP23327 699 aa22.34■■□□□ 1.17
PACS1-212ENST00000531597 LMOD2Q6P5Q4 547 aa22.33■■□□□ 1.17
PACS1-212ENST00000531597 NRXN1Q9ULB1 1477 aa22.33■■□□□ 1.16
PACS1-212ENST00000531597 ABCA3Q99758 1704 aa22.32■■□□□ 1.16
PACS1-212ENST00000531597 BAG6P46379 1132 aa22.32■■□□□ 1.16
PACS1-212ENST00000531597 ARHGEF10O15013 1369 aa22.31■■□□□ 1.16
PACS1-212ENST00000531597 FAM98CQ17RN3 349 aaKnown RBP22.3■■□□□ 1.16
PACS1-212ENST00000531597 C14orf93Q9H972 538 aaKnown RBP22.3■■□□□ 1.16
PACS1-212ENST00000531597 A0A0G2JS52 829 aa22.28■■□□□ 1.16
PACS1-212ENST00000531597 MYT1Q01538 1121 aa22.28■■□□□ 1.16
PACS1-212ENST00000531597 EN1Q05925 392 aaPredicted RBP22.27■■□□□ 1.16
PACS1-212ENST00000531597 PMFBP1Q8TBY8 1022 aa22.27■■□□□ 1.16
PACS1-212ENST00000531597 MPHOSPH9Q99550 1183 aa22.27■■□□□ 1.16
PACS1-212ENST00000531597 BTG4Q9NY30 223 aa22.27■■□□□ 1.16
PACS1-212ENST00000531597 NRAPQ86VF7 1730 aa22.26■■□□□ 1.15
PACS1-212ENST00000531597 SAFB2Q14151 953 aaKnown RBP eCLIP22.26■■□□□ 1.15
PACS1-212ENST00000531597 CFAP70Q5T0N1 1121 aa22.26■■□□□ 1.15
PACS1-212ENST00000531597 PRAM1Q96QH2 718 aa22.26■■□□□ 1.15
PACS1-212ENST00000531597 FAM182BQ5T319 152 aa22.25■■□□□ 1.15
PACS1-212ENST00000531597 DHX57Q6P158 1386 aaKnown RBP22.25■■□□□ 1.15
PACS1-212ENST00000531597 R3HDM1Q15032 1099 aaKnown RBP22.22■■□□□ 1.15
PACS1-212ENST00000531597 ANKARQ7Z5J8 1434 aa22.22■■□□□ 1.15
PACS1-212ENST00000531597 SPATA31A5Q5VU36 1347 aa22.21■■□□□ 1.15
PACS1-212ENST00000531597 SPATA31A7Q8IWB4 1347 aa22.21■■□□□ 1.15
PACS1-212ENST00000531597 TRPM3Q9HCF6 1732 aaPredicted RBP22.2■■□□□ 1.14
PACS1-212ENST00000531597 RGPD1P0DJD0 1748 aa22.2■■□□□ 1.14
PACS1-212ENST00000531597 DISP2A7MBM2 1401 aa22.19■■□□□ 1.14
PACS1-212ENST00000531597 COL14A1Q05707 1796 aaKnown RBP22.19■■□□□ 1.14
PACS1-212ENST00000531597 ALS2Q96Q42 1657 aa22.17■■□□□ 1.14
PACS1-212ENST00000531597 EZH2Q15910 746 aaKnown RBP22.17■■□□□ 1.14
PACS1-212ENST00000531597 POGKQ9P215 609 aa22.17■■□□□ 1.14
PACS1-212ENST00000531597 DLC1Q96QB1 1528 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms