RNA–Protein interactions for RNA: ENST00000531504.5

HIPK3-205, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 2

Gene HIPK3, Length 591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-205ENST00000531504 VGFO15240 615 aaPredicted RBP30.22■■■□□ 2.43
HIPK3-205ENST00000531504 MYOM2P54296 1465 aa30.22■■■□□ 2.43
HIPK3-205ENST00000531504 HFM1A2PYH4 1435 aa30.22■■■□□ 2.43
HIPK3-205ENST00000531504 EP400Q96L91 3159 aa30.21■■■□□ 2.43
HIPK3-205ENST00000531504 NPHP3Q7Z494 1330 aa30.21■■■□□ 2.43
HIPK3-205ENST00000531504 CDC42BPGQ6DT37 1551 aa30.17■■■□□ 2.42
HIPK3-205ENST00000531504 BCL9LQ86UU0 1499 aa30.17■■■□□ 2.42
HIPK3-205ENST00000531504 PXDNQ92626 1479 aa30.14■■■□□ 2.42
HIPK3-205ENST00000531504 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.14■■■□□ 2.42
HIPK3-205ENST00000531504 ESCO1Q5FWF5 840 aa30.13■■■□□ 2.41
HIPK3-205ENST00000531504 GJD4Q96KN9 370 aaPredicted RBP30.12■■■□□ 2.41
HIPK3-205ENST00000531504 RPGRIP1LQ68CZ1 1315 aa30.11■■■□□ 2.41
HIPK3-205ENST00000531504 LRPPRCP42704 1394 aaKnown RBP30.1■■■□□ 2.41
HIPK3-205ENST00000531504 PPLO60437 1756 aa30.1■■■□□ 2.41
HIPK3-205ENST00000531504 BLMP54132 1417 aaPredicted RBP30.07■■■□□ 2.4
HIPK3-205ENST00000531504 FOXO3O43524 673 aa30.04■■■□□ 2.4
HIPK3-205ENST00000531504 RALGAPBQ86X10 1494 aa30.02■■■□□ 2.4
HIPK3-205ENST00000531504 XPCQ01831 940 aaPredicted RBP30.02■■■□□ 2.4
HIPK3-205ENST00000531504 GLI3P10071 1580 aa30.02■■■□□ 2.4
HIPK3-205ENST00000531504 UNC5CLQ8IV45 518 aa30.01■■■□□ 2.39
HIPK3-205ENST00000531504 NAIPQ13075 1403 aa30.01■■■□□ 2.39
HIPK3-205ENST00000531504 SLIT2O94813 1529 aa30■■■□□ 2.39
HIPK3-205ENST00000531504 KIF1AQ12756 1690 aa29.98■■■□□ 2.39
HIPK3-205ENST00000531504 SF3B2Q13435 895 aaKnown RBP29.98■■■□□ 2.39
HIPK3-205ENST00000531504 BRWD3Q6RI45 1802 aa29.98■■■□□ 2.39
HIPK3-205ENST00000531504 USP32Q8NFA0 1604 aa29.97■■■□□ 2.39
HIPK3-205ENST00000531504 CCDC144AA2RUR9 1427 aa29.95■■■□□ 2.38
HIPK3-205ENST00000531504 TECPR2O15040 1411 aa29.95■■■□□ 2.38
HIPK3-205ENST00000531504 LRP5O75197 1615 aa29.94■■■□□ 2.38
HIPK3-205ENST00000531504 FMN2Q9NZ56 1722 aa29.93■■■□□ 2.38
HIPK3-205ENST00000531504 SPATA31A3Q5VYP0 1347 aa29.93■■■□□ 2.38
HIPK3-205ENST00000531504 NUTM2FA1L443 756 aa29.92■■■□□ 2.38
HIPK3-205ENST00000531504 KNDC1Q76NI1 1749 aa29.92■■■□□ 2.38
HIPK3-205ENST00000531504 DEFB132Q7Z7B7 95 aa29.9■■■□□ 2.38
HIPK3-205ENST00000531504 RRBP1Q9P2E9 1410 aaKnown RBP29.89■■■□□ 2.38
HIPK3-205ENST00000531504 HAP1P54257 671 aaPredicted RBP29.89■■■□□ 2.38
HIPK3-205ENST00000531504 SLC4A1APQ9BWU0 796 aaKnown RBP29.89■■■□□ 2.38
HIPK3-205ENST00000531504 STK26Q9P289 416 aa29.89■■■□□ 2.38
HIPK3-205ENST00000531504 NWD2Q9ULI1 1742 aa29.88■■■□□ 2.37
HIPK3-205ENST00000531504 WAPLQ7Z5K2 1190 aa29.87■■■□□ 2.37
HIPK3-205ENST00000531504 SEPT12Q8IYM1 358 aa29.87■■■□□ 2.37
HIPK3-205ENST00000531504 PLCH1Q4KWH8 1693 aa29.86■■■□□ 2.37
HIPK3-205ENST00000531504 PPARGC1BQ86YN6 1023 aaKnown RBP29.86■■■□□ 2.37
HIPK3-205ENST00000531504 ABCC11Q96J66 1382 aa29.85■■■□□ 2.37
HIPK3-205ENST00000531504 VPS72Q15906 364 aa29.84■■■□□ 2.37
HIPK3-205ENST00000531504 KRT28Q7Z3Y7 464 aa29.84■■■□□ 2.37
HIPK3-205ENST00000531504 ADGRF5Q8IZF2 1346 aa29.84■■■□□ 2.37
HIPK3-205ENST00000531504 TNS3Q68CZ2 1445 aa29.84■■■□□ 2.37
HIPK3-205ENST00000531504 IFT172Q9UG01 1749 aa29.83■■■□□ 2.37
HIPK3-205ENST00000531504 ANKRD30BQ9BXX2 1392 aa29.82■■■□□ 2.36
HIPK3-205ENST00000531504 CCDC9Q9Y3X0 531 aaKnown RBP29.81■■■□□ 2.36
HIPK3-205ENST00000531504 PLEKHH1Q9ULM0 1364 aa29.8■■■□□ 2.36
HIPK3-205ENST00000531504 PSME1Q06323 249 aa29.8■■■□□ 2.36
HIPK3-205ENST00000531504 KRT27Q7Z3Y8 459 aa29.8■■■□□ 2.36
HIPK3-205ENST00000531504 ABCA3Q99758 1704 aa29.79■■■□□ 2.36
HIPK3-205ENST00000531504 ONECUT3O60422 494 aaPredicted RBP29.78■■■□□ 2.36
HIPK3-205ENST00000531504 RGPD8O14715 1765 aaPredicted RBP29.77■■■□□ 2.36
HIPK3-205ENST00000531504 BAG6P46379 1132 aa29.76■■■□□ 2.35
HIPK3-205ENST00000531504 YTHDC2Q9H6S0 1430 aaKnown RBP29.76■■■□□ 2.35
HIPK3-205ENST00000531504 ARHGEF10O15013 1369 aa29.76■■■□□ 2.35
HIPK3-205ENST00000531504 PIK3C2GO75747 1445 aa29.75■■■□□ 2.35
HIPK3-205ENST00000531504 TMEM132EQ6IEE7 984 aa29.75■■■□□ 2.35
HIPK3-205ENST00000531504 PHF8Q9UPP1 1060 aa29.75■■■□□ 2.35
HIPK3-205ENST00000531504 SBNO1A3KN83 1393 aa29.75■■■□□ 2.35
HIPK3-205ENST00000531504 SPATA31E1Q6ZUB1 1445 aa29.74■■■□□ 2.35
HIPK3-205ENST00000531504 RGL3Q3MIN7 710 aa29.74■■■□□ 2.35
HIPK3-205ENST00000531504 CABLES1Q8TDN4 633 aa29.74■■■□□ 2.35
HIPK3-205ENST00000531504 A0A0G2JS52 829 aa29.73■■■□□ 2.35
HIPK3-205ENST00000531504 MYT1Q01538 1121 aa29.73■■■□□ 2.35
HIPK3-205ENST00000531504 NRXN1Q9ULB1 1477 aa29.72■■■□□ 2.35
HIPK3-205ENST00000531504 SIRT1Q96EB6 747 aa29.71■■■□□ 2.35
HIPK3-205ENST00000531504 LMOD2Q6P5Q4 547 aa29.7■■■□□ 2.35
HIPK3-205ENST00000531504 RGPD1P0DJD0 1748 aa29.69■■■□□ 2.34
HIPK3-205ENST00000531504 PSDA5PKW4 1024 aaPredicted RBP29.69■■■□□ 2.34
HIPK3-205ENST00000531504 PLEKHG5O94827 1062 aa29.69■■■□□ 2.34
HIPK3-205ENST00000531504 NRAPQ86VF7 1730 aa29.68■■■□□ 2.34
HIPK3-205ENST00000531504 HRCP23327 699 aa29.67■■■□□ 2.34
HIPK3-205ENST00000531504 FAM83GA6ND36 823 aa29.63■■■□□ 2.33
HIPK3-205ENST00000531504 FAM98CQ17RN3 349 aaKnown RBP29.63■■■□□ 2.33
HIPK3-205ENST00000531504 COL14A1Q05707 1796 aaKnown RBP29.62■■■□□ 2.33
HIPK3-205ENST00000531504 DHX57Q6P158 1386 aaKnown RBP29.61■■■□□ 2.33
HIPK3-205ENST00000531504 ANKARQ7Z5J8 1434 aa29.61■■■□□ 2.33
HIPK3-205ENST00000531504 C14orf93Q9H972 538 aaKnown RBP29.58■■■□□ 2.33
HIPK3-205ENST00000531504 BTG4Q9NY30 223 aa29.58■■■□□ 2.33
HIPK3-205ENST00000531504 TRPM3Q9HCF6 1732 aaPredicted RBP29.57■■■□□ 2.32
HIPK3-205ENST00000531504 EN1Q05925 392 aaPredicted RBP29.57■■■□□ 2.32
HIPK3-205ENST00000531504 ADGRB2O60241 1585 aa29.56■■■□□ 2.32
HIPK3-205ENST00000531504 DISP2A7MBM2 1401 aa29.55■■■□□ 2.32
HIPK3-205ENST00000531504 PRAM1Q96QH2 718 aa29.55■■■□□ 2.32
HIPK3-205ENST00000531504 ALS2Q96Q42 1657 aa29.55■■■□□ 2.32
HIPK3-205ENST00000531504 TNS1Q9HBL0 1735 aaKnown RBP29.54■■■□□ 2.32
HIPK3-205ENST00000531504 SAFB2Q14151 953 aaKnown RBP eCLIP29.54■■■□□ 2.32
HIPK3-205ENST00000531504 PMFBP1Q8TBY8 1022 aa29.54■■■□□ 2.32
HIPK3-205ENST00000531504 DLC1Q96QB1 1528 aa29.53■■■□□ 2.32
HIPK3-205ENST00000531504 THSD7AQ9UPZ6 1657 aa29.53■■■□□ 2.32
HIPK3-205ENST00000531504 GPRASP1Q5JY77 1395 aa29.52■■■□□ 2.32
HIPK3-205ENST00000531504 R3HDM1Q15032 1099 aaKnown RBP29.52■■■□□ 2.32
HIPK3-205ENST00000531504 MPHOSPH9Q99550 1183 aa29.52■■■□□ 2.32
HIPK3-205ENST00000531504 POGKQ9P215 609 aa29.51■■■□□ 2.31
HIPK3-205ENST00000531504 SPATA31A5Q5VU36 1347 aa29.5■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms