RNA–Protein interactions for RNA: ENST00000531490.1

TRIM53CP-201, Transcript of tripartite motif containing 53C, pseudogene, humanhuman

BASIC

Gene TRIM53CP, Length 1,354 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM53CP-201ENST00000531490 WDR70Q9NW82 654 aa11.18□□□□□ -0.62
TRIM53CP-201ENST00000531490 CASKIN1Q8WXD9 1431 aa11.18□□□□□ -0.62
TRIM53CP-201ENST00000531490 PREX2Q70Z35 1606 aa11.18□□□□□ -0.62
TRIM53CP-201ENST00000531490 MAP3K9P80192 1104 aa11.17□□□□□ -0.62
TRIM53CP-201ENST00000531490 PLA2R1Q13018 1463 aa11.17□□□□□ -0.62
TRIM53CP-201ENST00000531490 ITSN2Q9NZM3 1697 aa11.17□□□□□ -0.62
TRIM53CP-201ENST00000531490 SYCP2Q9BX26 1530 aa11.17□□□□□ -0.62
TRIM53CP-201ENST00000531490 GPATCH8Q9UKJ3 1502 aaKnown RBP11.17□□□□□ -0.62
TRIM53CP-201ENST00000531490 CFDP1Q9UEE9 299 aaPredicted RBP11.16□□□□□ -0.62
TRIM53CP-201ENST00000531490 ZNF644Q9H582 1327 aaPredicted RBP11.16□□□□□ -0.62
TRIM53CP-201ENST00000531490 CEP162Q5TB80 1403 aa11.16□□□□□ -0.62
TRIM53CP-201ENST00000531490 A2MP01023 1474 aa11.16□□□□□ -0.62
TRIM53CP-201ENST00000531490 TOM1O60784 492 aa11.16□□□□□ -0.62
TRIM53CP-201ENST00000531490 ZNF687Q8N1G0 1237 aa11.16□□□□□ -0.62
TRIM53CP-201ENST00000531490 CEP170BQ9Y4F5 1589 aaPredicted RBP11.15□□□□□ -0.62
TRIM53CP-201ENST00000531490 MED1Q15648 1581 aaPredicted RBP11.15□□□□□ -0.62
TRIM53CP-201ENST00000531490 EVI5O60447 810 aa11.15□□□□□ -0.63
TRIM53CP-201ENST00000531490 E2F4Q16254 413 aa11.15□□□□□ -0.63
TRIM53CP-201ENST00000531490 KRTAP3-3Q9BYR6 98 aa11.15□□□□□ -0.63
TRIM53CP-201ENST00000531490 KRTAP3-2Q9BYR7 98 aa11.15□□□□□ -0.63
TRIM53CP-201ENST00000531490 MYO3AQ8NEV4 1616 aa11.14□□□□□ -0.63
TRIM53CP-201ENST00000531490 DPYSL4O14531 572 aa11.14□□□□□ -0.63
TRIM53CP-201ENST00000531490 ANO8Q9HCE9 1232 aaPredicted RBP11.14□□□□□ -0.63
TRIM53CP-201ENST00000531490 CCDC18Q5T9S5 1454 aa11.13□□□□□ -0.63
TRIM53CP-201ENST00000531490 ATP7AQ04656 1500 aa11.13□□□□□ -0.63
TRIM53CP-201ENST00000531490 CLTCQ00610 1675 aaKnown RBP11.13□□□□□ -0.63
TRIM53CP-201ENST00000531490 SUPT6HQ7KZ85 1726 aaKnown RBP11.13□□□□□ -0.63
TRIM53CP-201ENST00000531490 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.12□□□□□ -0.63
TRIM53CP-201ENST00000531490 KIAA1107Q9UPP5 1409 aa11.12□□□□□ -0.63
TRIM53CP-201ENST00000531490 A2ML1A8K2U0 1454 aa11.12□□□□□ -0.63
TRIM53CP-201ENST00000531490 SHANK2Q9UPX8 1470 aa11.12□□□□□ -0.63
TRIM53CP-201ENST00000531490 PLXNC1O60486 1568 aa11.12□□□□□ -0.63
TRIM53CP-201ENST00000531490 MROH2AA6NES4 1674 aa11.12□□□□□ -0.63
TRIM53CP-201ENST00000531490 CCNB3Q8WWL7 1395 aa11.11□□□□□ -0.63
TRIM53CP-201ENST00000531490 TNRQ92752 1358 aa11.11□□□□□ -0.63
TRIM53CP-201ENST00000531490 PSDA5PKW4 1024 aaPredicted RBP11.11□□□□□ -0.63
TRIM53CP-201ENST00000531490 HAP1P54257 671 aaPredicted RBP11.11□□□□□ -0.63
TRIM53CP-201ENST00000531490 CDC42BPAQ5VT25 1732 aa11.1□□□□□ -0.63
TRIM53CP-201ENST00000531490 ANKLE2Q86XL3 938 aa11.1□□□□□ -0.63
TRIM53CP-201ENST00000531490 KIF3BO15066 747 aa11.09□□□□□ -0.63
TRIM53CP-201ENST00000531490 ZNF142P52746 1687 aaPredicted RBP11.09□□□□□ -0.63
TRIM53CP-201ENST00000531490 DNMT1P26358 1616 aaKnown RBP11.08□□□□□ -0.64
TRIM53CP-201ENST00000531490 ALKQ9UM73 1620 aa11.08□□□□□ -0.64
TRIM53CP-201ENST00000531490 NEURL4Q96JN8 1562 aa11.08□□□□□ -0.64
TRIM53CP-201ENST00000531490 INO80Q9ULG1 1556 aaPredicted RBP11.08□□□□□ -0.64
TRIM53CP-201ENST00000531490 FYCO1Q9BQS8 1478 aa11.08□□□□□ -0.64
TRIM53CP-201ENST00000531490 POTEEQ6S8J3 1075 aa11.07□□□□□ -0.64
TRIM53CP-201ENST00000531490 RGS17Q9UGC6 210 aaPredicted RBP11.07□□□□□ -0.64
TRIM53CP-201ENST00000531490 CPS1P31327 1500 aa11.07□□□□□ -0.64
TRIM53CP-201ENST00000531490 PLEKHH2Q8IVE3 1493 aa11.07□□□□□ -0.64
TRIM53CP-201ENST00000531490 DHX29Q7Z478 1369 aaKnown RBP11.07□□□□□ -0.64
TRIM53CP-201ENST00000531490 WASHC2CQ9Y4E1 1318 aa11.06□□□□□ -0.64
TRIM53CP-201ENST00000531490 PPP4R3BQ5MIZ7 849 aa11.06□□□□□ -0.64
TRIM53CP-201ENST00000531490 ZNF454Q8N9F8 522 aa11.06□□□□□ -0.64
TRIM53CP-201ENST00000531490 ARIH1Q9Y4X5 557 aaPredicted RBP11.06□□□□□ -0.64
TRIM53CP-201ENST00000531490 MBD5Q9P267 1494 aa11.06□□□□□ -0.64
TRIM53CP-201ENST00000531490 VWDEQ8N2E2 1590 aa11.06□□□□□ -0.64
TRIM53CP-201ENST00000531490 FOSBP53539 338 aa11.05□□□□□ -0.64
TRIM53CP-201ENST00000531490 THEMISQ8N1K5 641 aaPredicted RBP11.05□□□□□ -0.64
TRIM53CP-201ENST00000531490 NPHP4O75161 1426 aaPredicted RBP11.05□□□□□ -0.64
TRIM53CP-201ENST00000531490 MTUS2Q5JR59 1369 aa11.05□□□□□ -0.64
TRIM53CP-201ENST00000531490 MIA2Q96PC5 1412 aa11.04□□□□□ -0.64
TRIM53CP-201ENST00000531490 PBX2P40425 430 aa11.03□□□□□ -0.64
TRIM53CP-201ENST00000531490 PDIA6Q15084 440 aa11.03□□□□□ -0.64
TRIM53CP-201ENST00000531490 AXIN2Q9Y2T1 843 aa11.03□□□□□ -0.64
TRIM53CP-201ENST00000531490 PZPP20742 1482 aa11.03□□□□□ -0.64
TRIM53CP-201ENST00000531490 KCNV2Q8TDN2 545 aa11.02□□□□□ -0.65
TRIM53CP-201ENST00000531490 RTEL1-TNFRSF6BF6WH68 1400 aa11.01□□□□□ -0.65
TRIM53CP-201ENST00000531490 LRRC7Q96NW7 1537 aa11.01□□□□□ -0.65
TRIM53CP-201ENST00000531490 SPDYE16A6NNV3 312 aaPredicted RBP11.01□□□□□ -0.65
TRIM53CP-201ENST00000531490 PLSCR2Q9NRY7 297 aa11.01□□□□□ -0.65
TRIM53CP-201ENST00000531490 PCDHGA10Q9Y5H3 936 aa11.01□□□□□ -0.65
TRIM53CP-201ENST00000531490 VPS8Q8N3P4 1428 aa11□□□□□ -0.65
TRIM53CP-201ENST00000531490 FAM135AQ9P2D6 1515 aa11□□□□□ -0.65
TRIM53CP-201ENST00000531490 ARHGAP33O14559 1287 aa11□□□□□ -0.65
TRIM53CP-201ENST00000531490 KANK4Q5T7N3 995 aaPredicted RBP11□□□□□ -0.65
TRIM53CP-201ENST00000531490 SPNS2Q8IVW8 549 aa11□□□□□ -0.65
TRIM53CP-201ENST00000531490 KDM2AQ9Y2K7 1162 aa11□□□□□ -0.65
TRIM53CP-201ENST00000531490 MED14O60244 1454 aa11□□□□□ -0.65
TRIM53CP-201ENST00000531490 KDM5DQ9BY66 1539 aa10.99□□□□□ -0.65
TRIM53CP-201ENST00000531490 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
TRIM53CP-201ENST00000531490 UGGT1Q9NYU2 1555 aa10.99□□□□□ -0.65
TRIM53CP-201ENST00000531490 PTGER2P43116 358 aa10.99□□□□□ -0.65
TRIM53CP-201ENST00000531490 LSM11P83369 360 aaKnown RBP eCLIP10.99□□□□□ -0.65
TRIM53CP-201ENST00000531490 POTEAQ6S8J7 498 aa10.99□□□□□ -0.65
TRIM53CP-201ENST00000531490 ZDHHC16Q969W1 377 aa10.99□□□□□ -0.65
TRIM53CP-201ENST00000531490 NLRP1Q9C000 1473 aa10.98□□□□□ -0.65
TRIM53CP-201ENST00000531490 PHF14O94880 888 aa10.98□□□□□ -0.65
TRIM53CP-201ENST00000531490 LTKP29376 864 aa10.98□□□□□ -0.65
TRIM53CP-201ENST00000531490 PSEN2P49810 448 aa10.98□□□□□ -0.65
TRIM53CP-201ENST00000531490 BCL2L12Q9HB09 334 aa10.98□□□□□ -0.65
TRIM53CP-201ENST00000531490 DDX12PQ92771 950 aa10.97□□□□□ -0.65
TRIM53CP-201ENST00000531490 ARHGEF1Q92888 912 aaKnown RBP10.97□□□□□ -0.65
TRIM53CP-201ENST00000531490 ADAM33Q9BZ11 813 aa10.97□□□□□ -0.65
TRIM53CP-201ENST00000531490 ADGBQ8N7X0 1667 aa10.97□□□□□ -0.65
TRIM53CP-201ENST00000531490 ANKRD13DQ6ZTN6 518 aa10.96□□□□□ -0.65
TRIM53CP-201ENST00000531490 RBM33Q96EV2 1170 aaKnown RBP10.96□□□□□ -0.65
TRIM53CP-201ENST00000531490 POLR1AO95602 1720 aaPredicted RBP10.96□□□□□ -0.66
TRIM53CP-201ENST00000531490 CCDC141Q6ZP82 1450 aa10.96□□□□□ -0.66
TRIM53CP-201ENST00000531490 TYW1BQ6NUM6 668 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms