RNA–Protein interactions for RNA: ENST00000531467.5

ABCA7-214, Transcript of ATP binding cassette subfamily A member 7, human

TSL 5

Gene ABCA7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Exosome, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA7-214	ENST00000531467	SLC4A1AP	Q9BWU0	796 aa	Known RBP	19.78	■□□□□ 0.76
ABCA7-214	ENST00000531467	CCDC125	Q86Z20	511 aa		19.75	■□□□□ 0.75
ABCA7-214	ENST00000531467	ESCO1	Q5FWF5	840 aa		19.74	■□□□□ 0.75
ABCA7-214	ENST00000531467	COL22A1	Q8NFW1	1626 aa	Predicted RBP	19.73	■□□□□ 0.75
ABCA7-214	ENST00000531467	EP400	Q96L91	3159 aa		19.73	■□□□□ 0.75
ABCA7-214	ENST00000531467	KIF1B	O60333	1816 aa		19.73	■□□□□ 0.75
ABCA7-214	ENST00000531467	NPHP3	Q7Z494	1330 aa		19.73	■□□□□ 0.75
ABCA7-214	ENST00000531467	BCL9L	Q86UU0	1499 aa		19.73	■□□□□ 0.75
ABCA7-214	ENST00000531467	MYOM2	P54296	1465 aa		19.72	■□□□□ 0.75
ABCA7-214	ENST00000531467	XPC	Q01831	940 aa	Predicted RBP	19.71	■□□□□ 0.75
ABCA7-214	ENST00000531467	GJD4	Q96KN9	370 aa	Predicted RBP	19.71	■□□□□ 0.75
ABCA7-214	ENST00000531467	PRAG1	Q86YV5	1406 aa		19.7	■□□□□ 0.74
ABCA7-214	ENST00000531467	FOXO3	O43524	673 aa		19.7	■□□□□ 0.74
ABCA7-214	ENST00000531467	RPGRIP1L	Q68CZ1	1315 aa		19.7	■□□□□ 0.74
ABCA7-214	ENST00000531467	MPHOSPH9	Q99550	1183 aa		19.68	■□□□□ 0.74
ABCA7-214	ENST00000531467	ACIN1	Q9UKV3	1341 aa	Known RBP	19.68	■□□□□ 0.74
ABCA7-214	ENST00000531467	PXDN	Q92626	1479 aa		19.67	■□□□□ 0.74
ABCA7-214	ENST00000531467	NUTM2F	A1L443	756 aa		19.65	■□□□□ 0.74
ABCA7-214	ENST00000531467	LRPPRC	P42704	1394 aa	Known RBP	19.65	■□□□□ 0.74
ABCA7-214	ENST00000531467	UNC5CL	Q8IV45	518 aa		19.64	■□□□□ 0.73
ABCA7-214	ENST00000531467	CDC42BPG	Q6DT37	1551 aa		19.64	■□□□□ 0.73
ABCA7-214	ENST00000531467	MARF1	Q9Y4F3	1742 aa	Known RBP	19.64	■□□□□ 0.73
ABCA7-214	ENST00000531467	RAB3GAP2	Q9H2M9	1393 aa		19.62	■□□□□ 0.73
ABCA7-214	ENST00000531467	WAPL	Q7Z5K2	1190 aa		19.62	■□□□□ 0.73
ABCA7-214	ENST00000531467	STK26	Q9P289	416 aa		19.62	■□□□□ 0.73
ABCA7-214	ENST00000531467	BLM	P54132	1417 aa	Predicted RBP	19.61	■□□□□ 0.73
ABCA7-214	ENST00000531467	RALGAPB	Q86X10	1494 aa		19.6	■□□□□ 0.73
ABCA7-214	ENST00000531467	CCDC144A	A2RUR9	1427 aa		19.6	■□□□□ 0.73
ABCA7-214	ENST00000531467	PPL	O60437	1756 aa		19.6	■□□□□ 0.73
ABCA7-214	ENST00000531467	DEFB132	Q7Z7B7	95 aa		19.59	■□□□□ 0.73
ABCA7-214	ENST00000531467	GLI3	P10071	1580 aa		19.58	■□□□□ 0.73
ABCA7-214	ENST00000531467	SPATA31A3	Q5VYP0	1347 aa		19.58	■□□□□ 0.73
ABCA7-214	ENST00000531467	ADGRF5	Q8IZF2	1346 aa		19.58	■□□□□ 0.73
ABCA7-214	ENST00000531467	SLIT2	O94813	1529 aa		19.58	■□□□□ 0.73
ABCA7-214	ENST00000531467	SF3B2	Q13435	895 aa	Known RBP	19.58	■□□□□ 0.72
ABCA7-214	ENST00000531467	TNKS1BP1	Q9C0C2	1729 aa	Known RBP	19.58	■□□□□ 0.72
ABCA7-214	ENST00000531467	KRT28	Q7Z3Y7	464 aa		19.56	■□□□□ 0.72
ABCA7-214	ENST00000531467	SEPT12	Q8IYM1	358 aa		19.56	■□□□□ 0.72
ABCA7-214	ENST00000531467	HAP1	P54257	671 aa	Predicted RBP	19.55	■□□□□ 0.72
ABCA7-214	ENST00000531467	TMEM132E	Q6IEE7	984 aa		19.55	■□□□□ 0.72
ABCA7-214	ENST00000531467	SPATA31E1	Q6ZUB1	1445 aa		19.55	■□□□□ 0.72
ABCA7-214	ENST00000531467	RGL3	Q3MIN7	710 aa		19.54	■□□□□ 0.72
ABCA7-214	ENST00000531467	PLEKHH1	Q9ULM0	1364 aa		19.54	■□□□□ 0.72
ABCA7-214	ENST00000531467	TECPR2	O15040	1411 aa		19.53	■□□□□ 0.72
ABCA7-214	ENST00000531467	CCDC9	Q9Y3X0	531 aa	Known RBP	19.53	■□□□□ 0.72
ABCA7-214	ENST00000531467	ABCC11	Q96J66	1382 aa		19.53	■□□□□ 0.72
ABCA7-214	ENST00000531467	PLEKHG5	O94827	1062 aa		19.52	■□□□□ 0.72
ABCA7-214	ENST00000531467	HRC	P23327	699 aa		19.52	■□□□□ 0.72
ABCA7-214	ENST00000531467	VPS72	Q15906	364 aa		19.52	■□□□□ 0.72
ABCA7-214	ENST00000531467	CABLES1	Q8TDN4	633 aa		19.52	■□□□□ 0.72
ABCA7-214	ENST00000531467	BRWD3	Q6RI45	1802 aa		19.52	■□□□□ 0.72
ABCA7-214	ENST00000531467	USP32	Q8NFA0	1604 aa		19.51	■□□□□ 0.71
ABCA7-214	ENST00000531467	PSME1	Q06323	249 aa		19.5	■□□□□ 0.71
ABCA7-214	ENST00000531467	KRT27	Q7Z3Y8	459 aa		19.5	■□□□□ 0.71
ABCA7-214	ENST00000531467	KIF1A	Q12756	1690 aa		19.49	■□□□□ 0.71
ABCA7-214	ENST00000531467	FMN2	Q9NZ56	1722 aa		19.49	■□□□□ 0.71
ABCA7-214	ENST00000531467	ONECUT3	O60422	494 aa	Predicted RBP	19.49	■□□□□ 0.71
ABCA7-214	ENST00000531467	ANKRD30B	Q9BXX2	1392 aa		19.48	■□□□□ 0.71
ABCA7-214	ENST00000531467	LMOD2	Q6P5Q4	547 aa		19.48	■□□□□ 0.71
ABCA7-214	ENST00000531467	PHF8	Q9UPP1	1060 aa		19.48	■□□□□ 0.71
ABCA7-214	ENST00000531467	TNS3	Q68CZ2	1445 aa		19.47	■□□□□ 0.71
ABCA7-214	ENST00000531467	YTHDC2	Q9H6S0	1430 aa	Known RBP	19.46	■□□□□ 0.71
ABCA7-214	ENST00000531467		A0A0G2JS52	829 aa		19.46	■□□□□ 0.71
ABCA7-214	ENST00000531467	MYT1	Q01538	1121 aa		19.46	■□□□□ 0.71
ABCA7-214	ENST00000531467	KNDC1	Q76NI1	1749 aa		19.45	■□□□□ 0.7
ABCA7-214	ENST00000531467	PSD	A5PKW4	1024 aa	Predicted RBP	19.45	■□□□□ 0.7
ABCA7-214	ENST00000531467	FAM83G	A6ND36	823 aa		19.44	■□□□□ 0.7
ABCA7-214	ENST00000531467	BAG6	P46379	1132 aa		19.44	■□□□□ 0.7
ABCA7-214	ENST00000531467	SIRT1	Q96EB6	747 aa		19.44	■□□□□ 0.7
ABCA7-214	ENST00000531467	LRP5	O75197	1615 aa		19.43	■□□□□ 0.7
ABCA7-214	ENST00000531467	PIK3C2G	O75747	1445 aa		19.43	■□□□□ 0.7
ABCA7-214	ENST00000531467	PLCH1	Q4KWH8	1693 aa		19.43	■□□□□ 0.7
ABCA7-214	ENST00000531467	IFT172	Q9UG01	1749 aa		19.43	■□□□□ 0.7
ABCA7-214	ENST00000531467	SBNO1	A3KN83	1393 aa		19.43	■□□□□ 0.7
ABCA7-214	ENST00000531467	NWD2	Q9ULI1	1742 aa		19.42	■□□□□ 0.7
ABCA7-214	ENST00000531467	ARHGEF10	O15013	1369 aa		19.42	■□□□□ 0.7
ABCA7-214	ENST00000531467	FAM98C	Q17RN3	349 aa	Known RBP	19.41	■□□□□ 0.7
ABCA7-214	ENST00000531467	RGPD8	O14715	1765 aa	Predicted RBP	19.41	■□□□□ 0.7
ABCA7-214	ENST00000531467	SAFB2	Q14151	953 aa	Known RBP eCLIP	19.4	■□□□□ 0.7
ABCA7-214	ENST00000531467	NRXN1	Q9ULB1	1477 aa		19.4	■□□□□ 0.7
ABCA7-214	ENST00000531467	PMFBP1	Q8TBY8	1022 aa		19.39	■□□□□ 0.69
ABCA7-214	ENST00000531467	C14orf93	Q9H972	538 aa	Known RBP	19.39	■□□□□ 0.69
ABCA7-214	ENST00000531467	DHX57	Q6P158	1386 aa	Known RBP	19.38	■□□□□ 0.69
ABCA7-214	ENST00000531467	PRAM1	Q96QH2	718 aa		19.38	■□□□□ 0.69
ABCA7-214	ENST00000531467	BTG4	Q9NY30	223 aa		19.38	■□□□□ 0.69
ABCA7-214	ENST00000531467	ABCA3	Q99758	1704 aa		19.37	■□□□□ 0.69
ABCA7-214	ENST00000531467	EN1	Q05925	392 aa	Predicted RBP	19.37	■□□□□ 0.69
ABCA7-214	ENST00000531467	CFAP70	Q5T0N1	1121 aa		19.37	■□□□□ 0.69
ABCA7-214	ENST00000531467	FAM182B	Q5T319	152 aa		19.35	■□□□□ 0.69
ABCA7-214	ENST00000531467	R3HDM1	Q15032	1099 aa	Known RBP	19.34	■□□□□ 0.69
ABCA7-214	ENST00000531467	POGK	Q9P215	609 aa		19.34	■□□□□ 0.69
ABCA7-214	ENST00000531467	NRAP	Q86VF7	1730 aa		19.32	■□□□□ 0.68
ABCA7-214	ENST00000531467	ANKAR	Q7Z5J8	1434 aa		19.32	■□□□□ 0.68
ABCA7-214	ENST00000531467	SPATA31A5	Q5VU36	1347 aa		19.3	■□□□□ 0.68
ABCA7-214	ENST00000531467	SPATA31A7	Q8IWB4	1347 aa		19.3	■□□□□ 0.68
ABCA7-214	ENST00000531467	GPRASP1	Q5JY77	1395 aa		19.3	■□□□□ 0.68
ABCA7-214	ENST00000531467	HIRIP3	Q9BW71	556 aa	Predicted RBP	19.29	■□□□□ 0.68
ABCA7-214	ENST00000531467	COL14A1	Q05707	1796 aa	Known RBP	19.29	■□□□□ 0.68
ABCA7-214	ENST00000531467	RGPD1	P0DJD0	1748 aa		19.28	■□□□□ 0.68
ABCA7-214	ENST00000531467	EZH2	Q15910	746 aa	Known RBP	19.28	■□□□□ 0.68

Retrieved 100 of 20,778 RNA–protein pairs in 190.6 ms