RNA–Protein interactions for RNA: ENST00000531238.1

RELA-216, Transcript of RELA proto-oncogene, NF-kB subunit, humanhuman

TSL 4

Gene RELA, Length 541 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RELA-216ENST00000531238 KNDC1Q76NI1 1749 aa23.49■■□□□ 1.35
RELA-216ENST00000531238 C1orf167Q5SNV9 1468 aa23.49■■□□□ 1.35
RELA-216ENST00000531238 SAFB2Q14151 953 aaKnown RBP eCLIP23.48■■□□□ 1.35
RELA-216ENST00000531238 DDX17Q92841 729 aaKnown RBP23.48■■□□□ 1.35
RELA-216ENST00000531238 NUTM2FA1L443 756 aa23.45■■□□□ 1.34
RELA-216ENST00000531238 POGKQ9P215 609 aa23.44■■□□□ 1.34
RELA-216ENST00000531238 DLC1Q96QB1 1528 aa23.43■■□□□ 1.34
RELA-216ENST00000531238 DISP3Q9P2K9 1392 aa23.41■■□□□ 1.34
RELA-216ENST00000531238 NBPF8Q3BBV2 869 aa23.41■■□□□ 1.34
RELA-216ENST00000531238 PHLPP1O60346 1717 aa23.41■■□□□ 1.34
RELA-216ENST00000531238 AHDC1Q5TGY3 1603 aaPredicted RBP23.4■■□□□ 1.34
RELA-216ENST00000531238 CDC42BPGQ6DT37 1551 aa23.4■■□□□ 1.34
RELA-216ENST00000531238 ESCO1Q5FWF5 840 aa23.39■■□□□ 1.33
RELA-216ENST00000531238 COL16A1Q07092 1604 aaPredicted RBP23.39■■□□□ 1.33
RELA-216ENST00000531238 HIRIP3Q9BW71 556 aaPredicted RBP23.38■■□□□ 1.33
RELA-216ENST00000531238 MINK1Q8N4C8 1332 aaPredicted RBP23.36■■□□□ 1.33
RELA-216ENST00000531238 KIAA1210Q9ULL0 1709 aa23.36■■□□□ 1.33
RELA-216ENST00000531238 JCADQ9P266 1359 aa23.35■■□□□ 1.33
RELA-216ENST00000531238 MED1Q15648 1581 aaPredicted RBP23.35■■□□□ 1.33
RELA-216ENST00000531238 NHSL1Q5SYE7 1610 aa23.33■■□□□ 1.32
RELA-216ENST00000531238 SOS2Q07890 1332 aaPredicted RBP23.33■■□□□ 1.32
RELA-216ENST00000531238 FOXO3O43524 673 aa23.32■■□□□ 1.32
RELA-216ENST00000531238 FMN2Q9NZ56 1722 aa23.31■■□□□ 1.32
RELA-216ENST00000531238 WASLO00401 505 aaPredicted RBP23.31■■□□□ 1.32
RELA-216ENST00000531238 ILDR2Q71H61 639 aa23.31■■□□□ 1.32
RELA-216ENST00000531238 TONSLQ96HA7 1378 aa23.3■■□□□ 1.32
RELA-216ENST00000531238 LRRC59Q96AG4 307 aaKnown RBP23.3■■□□□ 1.32
RELA-216ENST00000531238 ARHGEF28Q8N1W1 1705 aaKnown RBP23.29■■□□□ 1.32
RELA-216ENST00000531238 PRR36Q9H6K5 1346 aa23.29■■□□□ 1.32
RELA-216ENST00000531238 XPCQ01831 940 aaPredicted RBP23.28■■□□□ 1.32
RELA-216ENST00000531238 RGS17Q9UGC6 210 aaPredicted RBP23.28■■□□□ 1.32
RELA-216ENST00000531238 TRPM1Q7Z4N2 1603 aa23.26■■□□□ 1.31
RELA-216ENST00000531238 PHF8Q9UPP1 1060 aa23.26■■□□□ 1.31
RELA-216ENST00000531238 ADGRB2O60241 1585 aa23.26■■□□□ 1.31
RELA-216ENST00000531238 CDK19Q9BWU1 502 aa23.25■■□□□ 1.31
RELA-216ENST00000531238 RGPD8O14715 1765 aaPredicted RBP23.24■■□□□ 1.31
RELA-216ENST00000531238 USP32Q8NFA0 1604 aa23.24■■□□□ 1.31
RELA-216ENST00000531238 PMFBP1Q8TBY8 1022 aa23.24■■□□□ 1.31
RELA-216ENST00000531238 SPATA31A6Q5VVP1 1343 aa23.24■■□□□ 1.31
RELA-216ENST00000531238 NPHP3Q7Z494 1330 aa23.24■■□□□ 1.31
RELA-216ENST00000531238 ROCK2O75116 1388 aaKnown RBP23.24■■□□□ 1.31
RELA-216ENST00000531238 CENPJQ9HC77 1338 aaPredicted RBP23.23■■□□□ 1.31
RELA-216ENST00000531238 PNPLA6Q8IY17 1366 aa23.23■■□□□ 1.31
RELA-216ENST00000531238 PXDNQ92626 1479 aa23.23■■□□□ 1.31
RELA-216ENST00000531238 LRP6O75581 1613 aa23.22■■□□□ 1.31
RELA-216ENST00000531238 KRT28Q7Z3Y7 464 aa23.22■■□□□ 1.31
RELA-216ENST00000531238 NUTM2BA6NNL0 878 aaPredicted RBP23.21■■□□□ 1.31
RELA-216ENST00000531238 NUTM2EB1AL46 878 aaPredicted RBP23.21■■□□□ 1.31
RELA-216ENST00000531238 NUTM2AQ8IVF1 878 aaPredicted RBP23.21■■□□□ 1.31
RELA-216ENST00000531238 NUDT16Q96DE0 195 aaKnown RBP23.21■■□□□ 1.31
RELA-216ENST00000531238 GPRASP1Q5JY77 1395 aa23.21■■□□□ 1.31
RELA-216ENST00000531238 ANKARQ7Z5J8 1434 aa23.21■■□□□ 1.31
RELA-216ENST00000531238 SHPRHQ149N8 1683 aa23.2■■□□□ 1.3
RELA-216ENST00000531238 PHF23Q9BUL5 403 aaPredicted RBP23.2■■□□□ 1.3
RELA-216ENST00000531238 CLSPNQ9HAW4 1339 aa23.18■■□□□ 1.3
RELA-216ENST00000531238 TULP4Q9NRJ4 1543 aa23.18■■□□□ 1.3
RELA-216ENST00000531238 CARD11Q9BXL7 1154 aa23.17■■□□□ 1.3
RELA-216ENST00000531238 SPATA31A3Q5VYP0 1347 aa23.15■■□□□ 1.3
RELA-216ENST00000531238 PSME1Q06323 249 aa23.15■■□□□ 1.3
RELA-216ENST00000531238 CABP2Q9NPB3 220 aa23.15■■□□□ 1.3
RELA-216ENST00000531238 ATP7BP35670 1465 aa23.14■■□□□ 1.29
RELA-216ENST00000531238 RALGAPBQ86X10 1494 aa23.14■■□□□ 1.29
RELA-216ENST00000531238 POTEAQ6S8J7 498 aa23.14■■□□□ 1.29
RELA-216ENST00000531238 CCER1Q8TC90 406 aaPredicted RBP23.14■■□□□ 1.29
RELA-216ENST00000531238 EIF3AQ14152 1382 aaKnown RBP23.14■■□□□ 1.29
RELA-216ENST00000531238 KIF1AQ12756 1690 aa23.13■■□□□ 1.29
RELA-216ENST00000531238 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
RELA-216ENST00000531238 MEX3CQ5U5Q3 659 aaKnown RBP23.11■■□□□ 1.29
RELA-216ENST00000531238 TIMELESSQ9UNS1 1208 aa23.11■■□□□ 1.29
RELA-216ENST00000531238 SRPK2P78362 688 aaKnown RBP23.1■■□□□ 1.29
RELA-216ENST00000531238 PLEKHG3A1L390 1219 aa23.09■■□□□ 1.29
RELA-216ENST00000531238 ADAMTS2O95450 1211 aa23.09■■□□□ 1.29
RELA-216ENST00000531238 NGDNQ8NEJ9 315 aaKnown RBP23.09■■□□□ 1.29
RELA-216ENST00000531238 QRICH2Q9H0J4 1663 aa23.09■■□□□ 1.29
RELA-216ENST00000531238 SBNO1A3KN83 1393 aa23.08■■□□□ 1.29
RELA-216ENST00000531238 ACEP12821 1306 aa23.07■■□□□ 1.28
RELA-216ENST00000531238 COL22A1Q8NFW1 1626 aaPredicted RBP23.05■■□□□ 1.28
RELA-216ENST00000531238 CABLES1Q8TDN4 633 aa23.05■■□□□ 1.28
RELA-216ENST00000531238 C8orf37Q96NL8 207 aa23.05■■□□□ 1.28
RELA-216ENST00000531238 CABP1Q9NZU7 370 aa23.05■■□□□ 1.28
RELA-216ENST00000531238 EVC2Q86UK5 1308 aa23.05■■□□□ 1.28
RELA-216ENST00000531238 LMOD2Q6P5Q4 547 aa23.04■■□□□ 1.28
RELA-216ENST00000531238 TNS3Q68CZ2 1445 aa23.04■■□□□ 1.28
RELA-216ENST00000531238 POLR3AO14802 1390 aaPredicted RBP23.03■■□□□ 1.28
RELA-216ENST00000531238 PLEKHG5O94827 1062 aa23.03■■□□□ 1.28
RELA-216ENST00000531238 AFF2P51816 1311 aa23.03■■□□□ 1.28
RELA-216ENST00000531238 ST20-MTHFSA0A0A6YYL1 179 aa23.02■■□□□ 1.28
RELA-216ENST00000531238 PPIP5K1Q6PFW1 1433 aa23.01■■□□□ 1.27
RELA-216ENST00000531238 NGLY1Q96IV0 654 aa23.01■■□□□ 1.27
RELA-216ENST00000531238 TESK2Q96S53 571 aa23.01■■□□□ 1.27
RELA-216ENST00000531238 TOPAZ1Q8N9V7 1692 aa23■■□□□ 1.27
RELA-216ENST00000531238 TRPM3Q9HCF6 1732 aaPredicted RBP23■■□□□ 1.27
RELA-216ENST00000531238 PAK3O75914 559 aaPredicted RBP23■■□□□ 1.27
RELA-216ENST00000531238 SBNO2Q9Y2G9 1366 aa23■■□□□ 1.27
RELA-216ENST00000531238 ZNF772Q68DY9 489 aaPredicted RBP22.99■■□□□ 1.27
RELA-216ENST00000531238 FNBP4Q8N3X1 1017 aaPredicted RBP22.98■■□□□ 1.27
RELA-216ENST00000531238 ITSN1Q15811 1721 aa22.97■■□□□ 1.27
RELA-216ENST00000531238 ARHGEF10O15013 1369 aa22.97■■□□□ 1.27
RELA-216ENST00000531238 ALS2Q96Q42 1657 aa22.94■■□□□ 1.26
RELA-216ENST00000531238 SOCS7O14512 581 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms