RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
CAPN1-221ENST00000531068 DDX17Q92841 729 aaKnown RBP15.91■□□□□ 0.14
CAPN1-221ENST00000531068 PRAM1Q96QH2 718 aa15.91■□□□□ 0.14
CAPN1-221ENST00000531068 AHDC1Q5TGY3 1603 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-221ENST00000531068 PLEKHH1Q9ULM0 1364 aa15.89■□□□□ 0.13
CAPN1-221ENST00000531068 NUTM2BA6NNL0 878 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-221ENST00000531068 NUTM2EB1AL46 878 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-221ENST00000531068 NUTM2AQ8IVF1 878 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-221ENST00000531068 TRAK1Q9UPV9 953 aa15.89■□□□□ 0.13
CAPN1-221ENST00000531068 SOS2Q07890 1332 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-221ENST00000531068 NPHP3Q7Z494 1330 aa15.89■□□□□ 0.13
CAPN1-221ENST00000531068 NUTM2FA1L443 756 aa15.88■□□□□ 0.13
CAPN1-221ENST00000531068 PHLPP1O60346 1717 aa15.88■□□□□ 0.13
CAPN1-221ENST00000531068 FOXO3O43524 673 aa15.87■□□□□ 0.13
CAPN1-221ENST00000531068 SAFB2Q14151 953 aaKnown RBP eCLIP15.87■□□□□ 0.13
CAPN1-221ENST00000531068 ZNF772Q68DY9 489 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-221ENST00000531068 SETD1AO15047 1707 aaKnown RBP15.87■□□□□ 0.13
CAPN1-221ENST00000531068 POTEAQ6S8J7 498 aa15.86■□□□□ 0.13
CAPN1-221ENST00000531068 COL16A1Q07092 1604 aaPredicted RBP15.85■□□□□ 0.13
CAPN1-221ENST00000531068 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.12
CAPN1-221ENST00000531068 PSME1Q06323 249 aa15.82■□□□□ 0.12
CAPN1-221ENST00000531068 PHF8Q9UPP1 1060 aa15.82■□□□□ 0.12
CAPN1-221ENST00000531068 CDC42BPGQ6DT37 1551 aa15.82■□□□□ 0.12
CAPN1-221ENST00000531068 NALCNQ8IZF0 1738 aa15.82■□□□□ 0.12
CAPN1-221ENST00000531068 IFT172Q9UG01 1749 aa15.82■□□□□ 0.12
CAPN1-221ENST00000531068 DLC1Q96QB1 1528 aa15.8■□□□□ 0.12
CAPN1-221ENST00000531068 MINK1Q8N4C8 1332 aaPredicted RBP15.8■□□□□ 0.12
CAPN1-221ENST00000531068 NEUROD1Q13562 356 aa15.8■□□□□ 0.12
CAPN1-221ENST00000531068 KRT28Q7Z3Y7 464 aa15.8■□□□□ 0.12
CAPN1-221ENST00000531068 L3MBTL2Q969R5 705 aa15.8■□□□□ 0.12
CAPN1-221ENST00000531068 LAMC1P11047 1609 aa15.79■□□□□ 0.12
CAPN1-221ENST00000531068 WASLO00401 505 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-221ENST00000531068 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-221ENST00000531068 NGLY1Q96IV0 654 aa15.79■□□□□ 0.12
CAPN1-221ENST00000531068 C8orf37Q96NL8 207 aa15.79■□□□□ 0.12
CAPN1-221ENST00000531068 SIN3AQ96ST3 1273 aa15.79■□□□□ 0.12
CAPN1-221ENST00000531068 HIRIP3Q9BW71 556 aaPredicted RBP15.79■□□□□ 0.12
CAPN1-221ENST00000531068 ADGRB1O14514 1584 aa15.79■□□□□ 0.12
CAPN1-221ENST00000531068 EIF3AQ14152 1382 aaKnown RBP15.78■□□□□ 0.12
CAPN1-221ENST00000531068 ADAMTS2O95450 1211 aa15.78■□□□□ 0.12
CAPN1-221ENST00000531068 LRP6O75581 1613 aa15.78■□□□□ 0.12
CAPN1-221ENST00000531068 AFF2P51816 1311 aa15.77■□□□□ 0.12
CAPN1-221ENST00000531068 RXRBP28702 533 aa15.77■□□□□ 0.12
CAPN1-221ENST00000531068 NBPF1Q3BBV0 1214 aa15.76■□□□□ 0.11
CAPN1-221ENST00000531068 ANKARQ7Z5J8 1434 aa15.76■□□□□ 0.11
CAPN1-221ENST00000531068 SPATA31A3Q5VYP0 1347 aa15.75■□□□□ 0.11
CAPN1-221ENST00000531068 PMFBP1Q8TBY8 1022 aa15.75■□□□□ 0.11
CAPN1-221ENST00000531068 QTRT2Q9H974 415 aaKnown RBP15.75■□□□□ 0.11
CAPN1-221ENST00000531068 KNDC1Q76NI1 1749 aa15.74■□□□□ 0.11
CAPN1-221ENST00000531068 SHPRHQ149N8 1683 aa15.74■□□□□ 0.11
CAPN1-221ENST00000531068 NHSL1Q5SYE7 1610 aa15.74■□□□□ 0.11
CAPN1-221ENST00000531068 ZEB1P37275 1124 aaPredicted RBP15.73■□□□□ 0.11
CAPN1-221ENST00000531068 PXDNQ92626 1479 aa15.72■□□□□ 0.11
CAPN1-221ENST00000531068 FNBP4Q8N3X1 1017 aaPredicted RBP15.72■□□□□ 0.11
CAPN1-221ENST00000531068 NGDNQ8NEJ9 315 aaKnown RBP15.72■□□□□ 0.11
CAPN1-221ENST00000531068 CDK19Q9BWU1 502 aa15.72■□□□□ 0.11
CAPN1-221ENST00000531068 USP21Q9UK80 565 aa15.72■□□□□ 0.11
CAPN1-221ENST00000531068 SBNO1A3KN83 1393 aa15.72■□□□□ 0.11
CAPN1-221ENST00000531068 GPRASP1Q5JY77 1395 aa15.72■□□□□ 0.11
CAPN1-221ENST00000531068 HAP1P54257 671 aaPredicted RBP15.71■□□□□ 0.11
CAPN1-221ENST00000531068 LMOD2Q6P5Q4 547 aa15.71■□□□□ 0.11
CAPN1-221ENST00000531068 NUDT16Q96DE0 195 aaKnown RBP15.71■□□□□ 0.11
CAPN1-221ENST00000531068 RBM6P78332 1123 aaKnown RBP15.7■□□□□ 0.1
CAPN1-221ENST00000531068 TRPC5Q9UL62 973 aaPredicted RBP15.7■□□□□ 0.1
CAPN1-221ENST00000531068 CCDC61Q9Y6R9 512 aa15.7■□□□□ 0.1
CAPN1-221ENST00000531068 PRR36Q9H6K5 1346 aa15.69■□□□□ 0.1
CAPN1-221ENST00000531068 CENPJQ9HC77 1338 aaPredicted RBP15.69■□□□□ 0.1
CAPN1-221ENST00000531068 ARHGEF10O15013 1369 aa15.69■□□□□ 0.1
CAPN1-221ENST00000531068 FMN2Q9NZ56 1722 aa15.66■□□□□ 0.1
CAPN1-221ENST00000531068 SRPK2P78362 688 aaKnown RBP15.66■□□□□ 0.1
CAPN1-221ENST00000531068 TNS3Q68CZ2 1445 aa15.66■□□□□ 0.1
CAPN1-221ENST00000531068 ROCK2O75116 1388 aaKnown RBP15.65■□□□□ 0.1
CAPN1-221ENST00000531068 TULP4Q9NRJ4 1543 aa15.65■□□□□ 0.1
CAPN1-221ENST00000531068 PLEKHG3A1L390 1219 aa15.65■□□□□ 0.1
CAPN1-221ENST00000531068 PAK3O75914 559 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-221ENST00000531068 ADGRB2O60241 1585 aa15.65■□□□□ 0.1
CAPN1-221ENST00000531068 TONSLQ96HA7 1378 aa15.64■□□□□ 0.09
CAPN1-221ENST00000531068 CABLES1Q8TDN4 633 aa15.64■□□□□ 0.09
CAPN1-221ENST00000531068 KIF1AQ12756 1690 aa15.63■□□□□ 0.09
CAPN1-221ENST00000531068 PLEKHG5O94827 1062 aa15.63■□□□□ 0.09
CAPN1-221ENST00000531068 NBPF8Q3BBV2 869 aa15.63■□□□□ 0.09
CAPN1-221ENST00000531068 CLSPNQ9HAW4 1339 aa15.63■□□□□ 0.09
CAPN1-221ENST00000531068 UNC5CLQ8IV45 518 aa15.62■□□□□ 0.09
CAPN1-221ENST00000531068 CDK12Q9NYV4 1490 aaPredicted RBP15.62■□□□□ 0.09
CAPN1-221ENST00000531068 EVC2Q86UK5 1308 aa15.62■□□□□ 0.09
CAPN1-221ENST00000531068 CCER1Q8TC90 406 aaPredicted RBP15.61■□□□□ 0.09
CAPN1-221ENST00000531068 CABP2Q9NPB3 220 aa15.61■□□□□ 0.09
CAPN1-221ENST00000531068 ACEP12821 1306 aa15.61■□□□□ 0.09
CAPN1-221ENST00000531068 KIAA1210Q9ULL0 1709 aa15.6■□□□□ 0.09
CAPN1-221ENST00000531068 GJD4Q96KN9 370 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-221ENST00000531068 CARD11Q9BXL7 1154 aa15.6■□□□□ 0.09
CAPN1-221ENST00000531068 COL22A1Q8NFW1 1626 aaPredicted RBP15.6■□□□□ 0.09
CAPN1-221ENST00000531068 FAM83GA6ND36 823 aa15.58■□□□□ 0.08
CAPN1-221ENST00000531068 CABP1Q9NZU7 370 aa15.58■□□□□ 0.08
CAPN1-221ENST00000531068 POLR3AO14802 1390 aaPredicted RBP15.58■□□□□ 0.08
CAPN1-221ENST00000531068 ATP7BP35670 1465 aa15.58■□□□□ 0.08
CAPN1-221ENST00000531068 BCL9LQ86UU0 1499 aa15.58■□□□□ 0.08
CAPN1-221ENST00000531068 ATRNO75882 1429 aa15.57■□□□□ 0.08
CAPN1-221ENST00000531068 VPS72Q15906 364 aa15.56■□□□□ 0.08
CAPN1-221ENST00000531068 ABTB2Q8N961 1025 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 190.3 ms