RNA–Protein interactions for RNA: ENST00000530996.5

CHMP4A-204, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 3 BASIC

Gene CHMP4A, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-204ENST00000530996 ESCO1Q5FWF5 840 aa23.56■■□□□ 1.36
CHMP4A-204ENST00000530996 RGS12O14924 1447 aa23.56■■□□□ 1.36
CHMP4A-204ENST00000530996 SOS2Q07890 1332 aaPredicted RBP23.56■■□□□ 1.36
CHMP4A-204ENST00000530996 MPHOSPH9Q99550 1183 aa23.55■■□□□ 1.36
CHMP4A-204ENST00000530996 QTRT2Q9H974 415 aaKnown RBP23.55■■□□□ 1.36
CHMP4A-204ENST00000530996 SPATA31E1Q6ZUB1 1445 aa23.54■■□□□ 1.36
CHMP4A-204ENST00000530996 NPHP3Q7Z494 1330 aa23.54■■□□□ 1.36
CHMP4A-204ENST00000530996 RBM6P78332 1123 aaKnown RBP23.53■■□□□ 1.36
CHMP4A-204ENST00000530996 NUTM2FA1L443 756 aa23.52■■□□□ 1.36
CHMP4A-204ENST00000530996 LRPPRCP42704 1394 aaKnown RBP23.52■■□□□ 1.36
CHMP4A-204ENST00000530996 TECPR2O15040 1411 aa23.5■■□□□ 1.35
CHMP4A-204ENST00000530996 PIK3C2GO75747 1445 aa23.5■■□□□ 1.35
CHMP4A-204ENST00000530996 XPCQ01831 940 aaPredicted RBP23.5■■□□□ 1.35
CHMP4A-204ENST00000530996 WAPLQ7Z5K2 1190 aa23.5■■□□□ 1.35
CHMP4A-204ENST00000530996 USP21Q9UK80 565 aa23.49■■□□□ 1.35
CHMP4A-204ENST00000530996 IFT172Q9UG01 1749 aa23.49■■□□□ 1.35
CHMP4A-204ENST00000530996 TMEM132EQ6IEE7 984 aa23.48■■□□□ 1.35
CHMP4A-204ENST00000530996 PLEKHH1Q9ULM0 1364 aa23.47■■□□□ 1.35
CHMP4A-204ENST00000530996 PXDNQ92626 1479 aa23.47■■□□□ 1.35
CHMP4A-204ENST00000530996 FOXO3O43524 673 aa23.46■■□□□ 1.35
CHMP4A-204ENST00000530996 KNDC1Q76NI1 1749 aa23.46■■□□□ 1.35
CHMP4A-204ENST00000530996 COL22A1Q8NFW1 1626 aaPredicted RBP23.46■■□□□ 1.35
CHMP4A-204ENST00000530996 MYOM2P54296 1465 aa23.45■■□□□ 1.34
CHMP4A-204ENST00000530996 YTHDC2Q9H6S0 1430 aaKnown RBP23.45■■□□□ 1.34
CHMP4A-204ENST00000530996 ABCC11Q96J66 1382 aa23.45■■□□□ 1.34
CHMP4A-204ENST00000530996 TRPC5Q9UL62 973 aaPredicted RBP23.44■■□□□ 1.34
CHMP4A-204ENST00000530996 ATAD2Q6PL18 1390 aa23.4■■□□□ 1.34
CHMP4A-204ENST00000530996 ACIN1Q9UKV3 1341 aaKnown RBP23.4■■□□□ 1.34
CHMP4A-204ENST00000530996 FMN2Q9NZ56 1722 aa23.39■■□□□ 1.34
CHMP4A-204ENST00000530996 ATRNO75882 1429 aa23.39■■□□□ 1.33
CHMP4A-204ENST00000530996 KIF1AQ12756 1690 aa23.38■■□□□ 1.33
CHMP4A-204ENST00000530996 FNBP4Q8N3X1 1017 aaPredicted RBP23.38■■□□□ 1.33
CHMP4A-204ENST00000530996 SAFB2Q14151 953 aaKnown RBP eCLIP23.37■■□□□ 1.33
CHMP4A-204ENST00000530996 DHX57Q6P158 1386 aaKnown RBP23.37■■□□□ 1.33
CHMP4A-204ENST00000530996 HAP1P54257 671 aaPredicted RBP23.35■■□□□ 1.33
CHMP4A-204ENST00000530996 CFAP70Q5T0N1 1121 aa23.35■■□□□ 1.33
CHMP4A-204ENST00000530996 RAB3GAP2Q9H2M9 1393 aa23.35■■□□□ 1.33
CHMP4A-204ENST00000530996 NRXN1Q9ULB1 1477 aa23.35■■□□□ 1.33
CHMP4A-204ENST00000530996 PLEKHG5O94827 1062 aa23.34■■□□□ 1.33
CHMP4A-204ENST00000530996 C14orf93Q9H972 538 aaKnown RBP23.34■■□□□ 1.33
CHMP4A-204ENST00000530996 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
CHMP4A-204ENST00000530996 SPATA31A3Q5VYP0 1347 aa23.32■■□□□ 1.32
CHMP4A-204ENST00000530996 BCL9LQ86UU0 1499 aa23.31■■□□□ 1.32
CHMP4A-204ENST00000530996 KRT28Q7Z3Y7 464 aa23.31■■□□□ 1.32
CHMP4A-204ENST00000530996 POGKQ9P215 609 aa23.31■■□□□ 1.32
CHMP4A-204ENST00000530996 PHF8Q9UPP1 1060 aa23.31■■□□□ 1.32
CHMP4A-204ENST00000530996 TNS3Q68CZ2 1445 aa23.31■■□□□ 1.32
CHMP4A-204ENST00000530996 LMOD2Q6P5Q4 547 aa23.29■■□□□ 1.32
CHMP4A-204ENST00000530996 MARF1Q9Y4F3 1742 aaKnown RBP23.29■■□□□ 1.32
CHMP4A-204ENST00000530996 USP32Q8NFA0 1604 aa23.29■■□□□ 1.32
CHMP4A-204ENST00000530996 SIRT1Q96EB6 747 aa23.28■■□□□ 1.32
CHMP4A-204ENST00000530996 PSME1Q06323 249 aa23.27■■□□□ 1.32
CHMP4A-204ENST00000530996 GJD4Q96KN9 370 aaPredicted RBP23.26■■□□□ 1.31
CHMP4A-204ENST00000530996 DLC1Q96QB1 1528 aa23.25■■□□□ 1.31
CHMP4A-204ENST00000530996 UNC5CLQ8IV45 518 aa23.25■■□□□ 1.31
CHMP4A-204ENST00000530996 ANKARQ7Z5J8 1434 aa23.24■■□□□ 1.31
CHMP4A-204ENST00000530996 RALGAPBQ86X10 1494 aa23.24■■□□□ 1.31
CHMP4A-204ENST00000530996 SLIT2O94813 1529 aa23.23■■□□□ 1.31
CHMP4A-204ENST00000530996 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.23■■□□□ 1.31
CHMP4A-204ENST00000530996 KDM2AQ9Y2K7 1162 aa23.23■■□□□ 1.31
CHMP4A-204ENST00000530996 ARHGEF10O15013 1369 aa23.23■■□□□ 1.31
CHMP4A-204ENST00000530996 PMFBP1Q8TBY8 1022 aa23.22■■□□□ 1.31
CHMP4A-204ENST00000530996 CABLES1Q8TDN4 633 aa23.22■■□□□ 1.31
CHMP4A-204ENST00000530996 HIRIP3Q9BW71 556 aaPredicted RBP23.22■■□□□ 1.31
CHMP4A-204ENST00000530996 TRAK1Q9UPV9 953 aa23.22■■□□□ 1.31
CHMP4A-204ENST00000530996 ADGRB2O60241 1585 aa23.22■■□□□ 1.31
CHMP4A-204ENST00000530996 CCDC9Q9Y3X0 531 aaKnown RBP23.21■■□□□ 1.31
CHMP4A-204ENST00000530996 SBNO1A3KN83 1393 aa23.21■■□□□ 1.31
CHMP4A-204ENST00000530996 ADGRB1O14514 1584 aa23.21■■□□□ 1.31
CHMP4A-204ENST00000530996 EIF3AQ14152 1382 aaKnown RBP23.2■■□□□ 1.3
CHMP4A-204ENST00000530996 MINK1Q8N4C8 1332 aaPredicted RBP23.2■■□□□ 1.3
CHMP4A-204ENST00000530996 DCAF11Q8TEB1 546 aa23.2■■□□□ 1.3
CHMP4A-204ENST00000530996 RGPD8O14715 1765 aaPredicted RBP23.19■■□□□ 1.3
CHMP4A-204ENST00000530996 GLI3P10071 1580 aa23.18■■□□□ 1.3
CHMP4A-204ENST00000530996 GPRASP1Q5JY77 1395 aa23.16■■□□□ 1.3
CHMP4A-204ENST00000530996 ABCA3Q99758 1704 aa23.16■■□□□ 1.3
CHMP4A-204ENST00000530996 PLCH1Q4KWH8 1693 aa23.16■■□□□ 1.3
CHMP4A-204ENST00000530996 EP400Q96L91 3159 aa23.15■■□□□ 1.3
CHMP4A-204ENST00000530996 TULP4Q9NRJ4 1543 aa23.15■■□□□ 1.3
CHMP4A-204ENST00000530996 A0A0G2JS52 829 aa23.15■■□□□ 1.3
CHMP4A-204ENST00000530996 MYT1Q01538 1121 aa23.15■■□□□ 1.3
CHMP4A-204ENST00000530996 ZRANB1Q9UGI0 708 aa23.15■■□□□ 1.3
CHMP4A-204ENST00000530996 CCDC125Q86Z20 511 aa23.13■■□□□ 1.29
CHMP4A-204ENST00000530996 VPS72Q15906 364 aa23.12■■□□□ 1.29
CHMP4A-204ENST00000530996 SEPT12Q8IYM1 358 aa23.11■■□□□ 1.29
CHMP4A-204ENST00000530996 PRR36Q9H6K5 1346 aa23.1■■□□□ 1.29
CHMP4A-204ENST00000530996 BLMP54132 1417 aaPredicted RBP23.1■■□□□ 1.29
CHMP4A-204ENST00000530996 NGDNQ8NEJ9 315 aaKnown RBP23.1■■□□□ 1.29
CHMP4A-204ENST00000530996 NWD2Q9ULI1 1742 aa23.1■■□□□ 1.29
CHMP4A-204ENST00000530996 WASLO00401 505 aaPredicted RBP23.09■■□□□ 1.29
CHMP4A-204ENST00000530996 PAK3O75914 559 aaPredicted RBP23.09■■□□□ 1.29
CHMP4A-204ENST00000530996 SF3B2Q13435 895 aaKnown RBP23.09■■□□□ 1.29
CHMP4A-204ENST00000530996 TRPM3Q9HCF6 1732 aaPredicted RBP23.08■■□□□ 1.28
CHMP4A-204ENST00000530996 FAM83GA6ND36 823 aa23.06■■□□□ 1.28
CHMP4A-204ENST00000530996 STAC3Q96MF2 364 aa23.06■■□□□ 1.28
CHMP4A-204ENST00000530996 BTG4Q9NY30 223 aa23.05■■□□□ 1.28
CHMP4A-204ENST00000530996 ARHGEF28Q8N1W1 1705 aaKnown RBP23.04■■□□□ 1.28
CHMP4A-204ENST00000530996 ALS2Q96Q42 1657 aa23.03■■□□□ 1.28
CHMP4A-204ENST00000530996 KRT27Q7Z3Y8 459 aa23.03■■□□□ 1.28
CHMP4A-204ENST00000530996 SRCAPQ6ZRS2 3230 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 189.3 ms