RNA–Protein interactions for RNA: ENST00000530927.5

GMDS-208, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GMDS, Length 1,440 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-208ENST00000530927 C1orf167Q5SNV9 1468 aa27.1■■□□□ 1.93
GMDS-208ENST00000530927 CDC42BPGQ6DT37 1551 aa27.1■■□□□ 1.93
GMDS-208ENST00000530927 DDX17Q92841 729 aaKnown RBP27.09■■□□□ 1.93
GMDS-208ENST00000530927 COL16A1Q07092 1604 aaPredicted RBP27.09■■□□□ 1.93
GMDS-208ENST00000530927 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
GMDS-208ENST00000530927 NBPF1Q3BBV0 1214 aa27.07■■□□□ 1.92
GMDS-208ENST00000530927 DLC1Q96QB1 1528 aa27.07■■□□□ 1.92
GMDS-208ENST00000530927 AHDC1Q5TGY3 1603 aaPredicted RBP27.07■■□□□ 1.92
GMDS-208ENST00000530927 MED1Q15648 1581 aaPredicted RBP27.07■■□□□ 1.92
GMDS-208ENST00000530927 ORAI2Q96SN7 254 aa27.07■■□□□ 1.92
GMDS-208ENST00000530927 DISP3Q9P2K9 1392 aa27.06■■□□□ 1.92
GMDS-208ENST00000530927 SIRT1Q96EB6 747 aa27.05■■□□□ 1.92
GMDS-208ENST00000530927 KIAA1210Q9ULL0 1709 aa27.04■■□□□ 1.92
GMDS-208ENST00000530927 POGKQ9P215 609 aa27.03■■□□□ 1.92
GMDS-208ENST00000530927 ARHGEF28Q8N1W1 1705 aaKnown RBP27.03■■□□□ 1.92
GMDS-208ENST00000530927 NHSL1Q5SYE7 1610 aa27.03■■□□□ 1.92
GMDS-208ENST00000530927 FMN2Q9NZ56 1722 aa27.02■■□□□ 1.92
GMDS-208ENST00000530927 HIRIP3Q9BW71 556 aaPredicted RBP27■■□□□ 1.91
GMDS-208ENST00000530927 MINK1Q8N4C8 1332 aaPredicted RBP26.98■■□□□ 1.91
GMDS-208ENST00000530927 TRPM1Q7Z4N2 1603 aa26.97■■□□□ 1.91
GMDS-208ENST00000530927 ESCO1Q5FWF5 840 aa26.97■■□□□ 1.91
GMDS-208ENST00000530927 RGPD8O14715 1765 aaPredicted RBP26.96■■□□□ 1.91
GMDS-208ENST00000530927 NBPF8Q3BBV2 869 aa26.96■■□□□ 1.91
GMDS-208ENST00000530927 ADGRB2O60241 1585 aa26.94■■□□□ 1.9
GMDS-208ENST00000530927 JCADQ9P266 1359 aa26.93■■□□□ 1.9
GMDS-208ENST00000530927 TONSLQ96HA7 1378 aa26.92■■□□□ 1.9
GMDS-208ENST00000530927 USP32Q8NFA0 1604 aa26.92■■□□□ 1.9
GMDS-208ENST00000530927 XPCQ01831 940 aaPredicted RBP26.9■■□□□ 1.9
GMDS-208ENST00000530927 SHPRHQ149N8 1683 aa26.89■■□□□ 1.89
GMDS-208ENST00000530927 FOXO3O43524 673 aa26.88■■□□□ 1.89
GMDS-208ENST00000530927 LRP6O75581 1613 aa26.87■■□□□ 1.89
GMDS-208ENST00000530927 ILDR2Q71H61 639 aa26.87■■□□□ 1.89
GMDS-208ENST00000530927 ROCK2O75116 1388 aaKnown RBP26.86■■□□□ 1.89
GMDS-208ENST00000530927 SOS2Q07890 1332 aaPredicted RBP26.85■■□□□ 1.89
GMDS-208ENST00000530927 PRR36Q9H6K5 1346 aa26.85■■□□□ 1.89
GMDS-208ENST00000530927 PXDNQ92626 1479 aa26.84■■□□□ 1.89
GMDS-208ENST00000530927 WASLO00401 505 aaPredicted RBP26.83■■□□□ 1.89
GMDS-208ENST00000530927 LRRC59Q96AG4 307 aaKnown RBP26.82■■□□□ 1.88
GMDS-208ENST00000530927 PHF23Q9BUL5 403 aaPredicted RBP26.82■■□□□ 1.88
GMDS-208ENST00000530927 PNPLA6Q8IY17 1366 aa26.81■■□□□ 1.88
GMDS-208ENST00000530927 KIF1AQ12756 1690 aa26.81■■□□□ 1.88
GMDS-208ENST00000530927 TULP4Q9NRJ4 1543 aa26.81■■□□□ 1.88
GMDS-208ENST00000530927 QRICH2Q9H0J4 1663 aa26.81■■□□□ 1.88
GMDS-208ENST00000530927 NUTM2BA6NNL0 878 aaPredicted RBP26.81■■□□□ 1.88
GMDS-208ENST00000530927 NUTM2EB1AL46 878 aaPredicted RBP26.81■■□□□ 1.88
GMDS-208ENST00000530927 NUTM2AQ8IVF1 878 aaPredicted RBP26.81■■□□□ 1.88
GMDS-208ENST00000530927 PMFBP1Q8TBY8 1022 aa26.81■■□□□ 1.88
GMDS-208ENST00000530927 PHF8Q9UPP1 1060 aa26.81■■□□□ 1.88
GMDS-208ENST00000530927 NPHP3Q7Z494 1330 aa26.8■■□□□ 1.88
GMDS-208ENST00000530927 RGS17Q9UGC6 210 aaPredicted RBP26.8■■□□□ 1.88
GMDS-208ENST00000530927 ANKARQ7Z5J8 1434 aa26.79■■□□□ 1.88
GMDS-208ENST00000530927 CENPJQ9HC77 1338 aaPredicted RBP26.79■■□□□ 1.88
GMDS-208ENST00000530927 SPATA31A6Q5VVP1 1343 aa26.78■■□□□ 1.88
GMDS-208ENST00000530927 CDK19Q9BWU1 502 aa26.77■■□□□ 1.88
GMDS-208ENST00000530927 ATP7BP35670 1465 aa26.76■■□□□ 1.87
GMDS-208ENST00000530927 RALGAPBQ86X10 1494 aa26.76■■□□□ 1.87
GMDS-208ENST00000530927 GPRASP1Q5JY77 1395 aa26.76■■□□□ 1.87
GMDS-208ENST00000530927 KRT28Q7Z3Y7 464 aa26.73■■□□□ 1.87
GMDS-208ENST00000530927 NUDT16Q96DE0 195 aaKnown RBP26.73■■□□□ 1.87
GMDS-208ENST00000530927 CCER1Q8TC90 406 aaPredicted RBP26.72■■□□□ 1.87
GMDS-208ENST00000530927 CARD11Q9BXL7 1154 aa26.72■■□□□ 1.87
GMDS-208ENST00000530927 EIF3AQ14152 1382 aaKnown RBP26.72■■□□□ 1.87
GMDS-208ENST00000530927 MEX3CQ5U5Q3 659 aaKnown RBP26.71■■□□□ 1.87
GMDS-208ENST00000530927 TOPAZ1Q8N9V7 1692 aa26.69■■□□□ 1.86
GMDS-208ENST00000530927 COL22A1Q8NFW1 1626 aaPredicted RBP26.69■■□□□ 1.86
GMDS-208ENST00000530927 CABP2Q9NPB3 220 aa26.69■■□□□ 1.86
GMDS-208ENST00000530927 ITSN1Q15811 1721 aa26.68■■□□□ 1.86
GMDS-208ENST00000530927 SPATA31A3Q5VYP0 1347 aa26.67■■□□□ 1.86
GMDS-208ENST00000530927 CLSPNQ9HAW4 1339 aa26.66■■□□□ 1.86
GMDS-208ENST00000530927 PLEKHG5O94827 1062 aa26.66■■□□□ 1.86
GMDS-208ENST00000530927 SRPK2P78362 688 aaKnown RBP26.66■■□□□ 1.86
GMDS-208ENST00000530927 PSME1Q06323 249 aa26.66■■□□□ 1.86
GMDS-208ENST00000530927 ADAMTS2O95450 1211 aa26.65■■□□□ 1.86
GMDS-208ENST00000530927 POTEAQ6S8J7 498 aa26.65■■□□□ 1.86
GMDS-208ENST00000530927 TRPM3Q9HCF6 1732 aaPredicted RBP26.65■■□□□ 1.86
GMDS-208ENST00000530927 TNS3Q68CZ2 1445 aa26.64■■□□□ 1.86
GMDS-208ENST00000530927 NGDNQ8NEJ9 315 aaKnown RBP26.64■■□□□ 1.85
GMDS-208ENST00000530927 LMOD2Q6P5Q4 547 aa26.61■■□□□ 1.85
GMDS-208ENST00000530927 C8orf37Q96NL8 207 aa26.61■■□□□ 1.85
GMDS-208ENST00000530927 CABLES1Q8TDN4 633 aa26.6■■□□□ 1.85
GMDS-208ENST00000530927 CCDC61Q9Y6R9 512 aa26.6■■□□□ 1.85
GMDS-208ENST00000530927 SBNO1A3KN83 1393 aa26.6■■□□□ 1.85
GMDS-208ENST00000530927 PPIP5K1Q6PFW1 1433 aa26.59■■□□□ 1.85
GMDS-208ENST00000530927 ACEP12821 1306 aa26.59■■□□□ 1.85
GMDS-208ENST00000530927 AFF2P51816 1311 aa26.58■■□□□ 1.85
GMDS-208ENST00000530927 EVC2Q86UK5 1308 aa26.57■■□□□ 1.84
GMDS-208ENST00000530927 ALS2Q96Q42 1657 aa26.57■■□□□ 1.84
GMDS-208ENST00000530927 POLR3AO14802 1390 aaPredicted RBP26.56■■□□□ 1.84
GMDS-208ENST00000530927 ABCA3Q99758 1704 aa26.55■■□□□ 1.84
GMDS-208ENST00000530927 PLEKHG3A1L390 1219 aa26.55■■□□□ 1.84
GMDS-208ENST00000530927 PAK3O75914 559 aaPredicted RBP26.55■■□□□ 1.84
GMDS-208ENST00000530927 CABP1Q9NZU7 370 aa26.54■■□□□ 1.84
GMDS-208ENST00000530927 MARF1Q9Y4F3 1742 aaKnown RBP26.53■■□□□ 1.84
GMDS-208ENST00000530927 ST20-MTHFSA0A0A6YYL1 179 aa26.52■■□□□ 1.84
GMDS-208ENST00000530927 NGLY1Q96IV0 654 aa26.52■■□□□ 1.84
GMDS-208ENST00000530927 TIMELESSQ9UNS1 1208 aa26.51■■□□□ 1.83
GMDS-208ENST00000530927 ARHGEF10O15013 1369 aa26.51■■□□□ 1.83
GMDS-208ENST00000530927 SBNO2Q9Y2G9 1366 aa26.51■■□□□ 1.83
GMDS-208ENST00000530927 NUTM2GQ5VZR2 741 aa26.49■■□□□ 1.83
GMDS-208ENST00000530927 ZNF772Q68DY9 489 aaPredicted RBP26.48■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms