RNA–Protein interactions for RNA: ENST00000530587.5

PHF21A-214, Transcript of PHD finger protein 21A, humanhuman

TSL 5

Gene PHF21A, Length 1,293 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF21A-214ENST00000530587 IFT172Q9UG01 1749 aa20.39■□□□□ 0.86
PHF21A-214ENST00000530587 YTHDC2Q9H6S0 1430 aaKnown RBP20.39■□□□□ 0.85
PHF21A-214ENST00000530587 DHX57Q6P158 1386 aaKnown RBP20.38■□□□□ 0.85
PHF21A-214ENST00000530587 SOS2Q07890 1332 aaPredicted RBP20.38■□□□□ 0.85
PHF21A-214ENST00000530587 NALCNQ8IZF0 1738 aa20.37■□□□□ 0.85
PHF21A-214ENST00000530587 DDX17Q92841 729 aaKnown RBP20.37■□□□□ 0.85
PHF21A-214ENST00000530587 PLEKHH1Q9ULM0 1364 aa20.34■□□□□ 0.85
PHF21A-214ENST00000530587 DCAF11Q8TEB1 546 aa20.34■□□□□ 0.85
PHF21A-214ENST00000530587 LRP6O75581 1613 aa20.32■□□□□ 0.84
PHF21A-214ENST00000530587 NHSL1Q5SYE7 1610 aa20.32■□□□□ 0.84
PHF21A-214ENST00000530587 ESCO1Q5FWF5 840 aa20.32■□□□□ 0.84
PHF21A-214ENST00000530587 PNPLA6Q8IY17 1366 aa20.32■□□□□ 0.84
PHF21A-214ENST00000530587 ZNF772Q68DY9 489 aaPredicted RBP20.31■□□□□ 0.84
PHF21A-214ENST00000530587 KDM2AQ9Y2K7 1162 aa20.31■□□□□ 0.84
PHF21A-214ENST00000530587 SHPRHQ149N8 1683 aa20.31■□□□□ 0.84
PHF21A-214ENST00000530587 LAMC1P11047 1609 aa20.31■□□□□ 0.84
PHF21A-214ENST00000530587 CDC42BPGQ6DT37 1551 aa20.3■□□□□ 0.84
PHF21A-214ENST00000530587 MEX3CQ5U5Q3 659 aaKnown RBP20.3■□□□□ 0.84
PHF21A-214ENST00000530587 NPHP3Q7Z494 1330 aa20.29■□□□□ 0.84
PHF21A-214ENST00000530587 NUTM2BA6NNL0 878 aaPredicted RBP20.29■□□□□ 0.84
PHF21A-214ENST00000530587 NUTM2EB1AL46 878 aaPredicted RBP20.29■□□□□ 0.84
PHF21A-214ENST00000530587 NUTM2AQ8IVF1 878 aaPredicted RBP20.29■□□□□ 0.84
PHF21A-214ENST00000530587 PRAM1Q96QH2 718 aa20.28■□□□□ 0.84
PHF21A-214ENST00000530587 KNDC1Q76NI1 1749 aa20.27■□□□□ 0.84
PHF21A-214ENST00000530587 FOXO3O43524 673 aa20.27■□□□□ 0.84
PHF21A-214ENST00000530587 DLC1Q96QB1 1528 aa20.26■□□□□ 0.83
PHF21A-214ENST00000530587 POGKQ9P215 609 aa20.25■□□□□ 0.83
PHF21A-214ENST00000530587 ADGRB1O14514 1584 aa20.25■□□□□ 0.83
PHF21A-214ENST00000530587 NUTM2FA1L443 756 aa20.24■□□□□ 0.83
PHF21A-214ENST00000530587 TRAK1Q9UPV9 953 aa20.23■□□□□ 0.83
PHF21A-214ENST00000530587 AFF2P51816 1311 aa20.21■□□□□ 0.83
PHF21A-214ENST00000530587 PXDNQ92626 1479 aa20.2■□□□□ 0.82
PHF21A-214ENST00000530587 SAFB2Q14151 953 aaKnown RBP eCLIP20.2■□□□□ 0.82
PHF21A-214ENST00000530587 PHF8Q9UPP1 1060 aa20.2■□□□□ 0.82
PHF21A-214ENST00000530587 RXRBP28702 533 aa20.19■□□□□ 0.82
PHF21A-214ENST00000530587 KRT28Q7Z3Y7 464 aa20.19■□□□□ 0.82
PHF21A-214ENST00000530587 FNBP4Q8N3X1 1017 aaPredicted RBP20.18■□□□□ 0.82
PHF21A-214ENST00000530587 SPATA31A3Q5VYP0 1347 aa20.18■□□□□ 0.82
PHF21A-214ENST00000530587 ADAMTS2O95450 1211 aa20.17■□□□□ 0.82
PHF21A-214ENST00000530587 XPCQ01831 940 aaPredicted RBP20.17■□□□□ 0.82
PHF21A-214ENST00000530587 NGLY1Q96IV0 654 aa20.17■□□□□ 0.82
PHF21A-214ENST00000530587 C8orf37Q96NL8 207 aa20.17■□□□□ 0.82
PHF21A-214ENST00000530587 PSME1Q06323 249 aa20.16■□□□□ 0.82
PHF21A-214ENST00000530587 QTRT2Q9H974 415 aaKnown RBP20.16■□□□□ 0.82
PHF21A-214ENST00000530587 ANKARQ7Z5J8 1434 aa20.16■□□□□ 0.82
PHF21A-214ENST00000530587 WASLO00401 505 aaPredicted RBP20.15■□□□□ 0.82
PHF21A-214ENST00000530587 FMN2Q9NZ56 1722 aa20.15■□□□□ 0.82
PHF21A-214ENST00000530587 PPP4R3CPQ6ZMV5 832 aa20.14■□□□□ 0.81
PHF21A-214ENST00000530587 SBNO1A3KN83 1393 aa20.12■□□□□ 0.81
PHF21A-214ENST00000530587 EIF3AQ14152 1382 aaKnown RBP20.12■□□□□ 0.81
PHF21A-214ENST00000530587 MINK1Q8N4C8 1332 aaPredicted RBP20.12■□□□□ 0.81
PHF21A-214ENST00000530587 RBM6P78332 1123 aaKnown RBP20.12■□□□□ 0.81
PHF21A-214ENST00000530587 HIRIP3Q9BW71 556 aaPredicted RBP20.12■□□□□ 0.81
PHF21A-214ENST00000530587 CDK12Q9NYV4 1490 aaPredicted RBP20.11■□□□□ 0.81
PHF21A-214ENST00000530587 NBPF1Q3BBV0 1214 aa20.11■□□□□ 0.81
PHF21A-214ENST00000530587 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
PHF21A-214ENST00000530587 COL22A1Q8NFW1 1626 aaPredicted RBP20.11■□□□□ 0.81
PHF21A-214ENST00000530587 PRR36Q9H6K5 1346 aa20.1■□□□□ 0.81
PHF21A-214ENST00000530587 ADGRB2O60241 1585 aa20.1■□□□□ 0.81
PHF21A-214ENST00000530587 SIN3AQ96ST3 1273 aa20.09■□□□□ 0.81
PHF21A-214ENST00000530587 USP21Q9UK80 565 aa20.09■□□□□ 0.81
PHF21A-214ENST00000530587 KIF1AQ12756 1690 aa20.08■□□□□ 0.81
PHF21A-214ENST00000530587 PMFBP1Q8TBY8 1022 aa20.08■□□□□ 0.81
PHF21A-214ENST00000530587 TRPC5Q9UL62 973 aaPredicted RBP20.08■□□□□ 0.81
PHF21A-214ENST00000530587 NUDT16Q96DE0 195 aaKnown RBP20.05■□□□□ 0.8
PHF21A-214ENST00000530587 CDK19Q9BWU1 502 aa20.05■□□□□ 0.8
PHF21A-214ENST00000530587 TNS3Q68CZ2 1445 aa20.04■□□□□ 0.8
PHF21A-214ENST00000530587 ARHGEF10O15013 1369 aa20.04■□□□□ 0.8
PHF21A-214ENST00000530587 KIAA1210Q9ULL0 1709 aa20.04■□□□□ 0.8
PHF21A-214ENST00000530587 TULP4Q9NRJ4 1543 aa20.03■□□□□ 0.8
PHF21A-214ENST00000530587 GPRASP1Q5JY77 1395 aa20.03■□□□□ 0.8
PHF21A-214ENST00000530587 BCL9LQ86UU0 1499 aa20.03■□□□□ 0.8
PHF21A-214ENST00000530587 USP32Q8NFA0 1604 aa20.02■□□□□ 0.8
PHF21A-214ENST00000530587 UPF1Q92900 1129 aaKnown RBP eCLIP20.02■□□□□ 0.84e-8■■■■■ 57.2
PHF21A-214ENST00000530587 CCDC61Q9Y6R9 512 aa20.02■□□□□ 0.8
PHF21A-214ENST00000530587 ATRNO75882 1429 aa20.02■□□□□ 0.79
PHF21A-214ENST00000530587 PLEKHG3A1L390 1219 aa20.01■□□□□ 0.79
PHF21A-214ENST00000530587 NEUROD1Q13562 356 aa20.01■□□□□ 0.79
PHF21A-214ENST00000530587 NGDNQ8NEJ9 315 aaKnown RBP20.01■□□□□ 0.79
PHF21A-214ENST00000530587 RGPD8O14715 1765 aaPredicted RBP20■□□□□ 0.79
PHF21A-214ENST00000530587 TRIM26Q12899 539 aaPredicted RBP20■□□□□ 0.79
PHF21A-214ENST00000530587 UNC5CLQ8IV45 518 aa19.99■□□□□ 0.79
PHF21A-214ENST00000530587 CABLES1Q8TDN4 633 aa19.99■□□□□ 0.79
PHF21A-214ENST00000530587 CENPJQ9HC77 1338 aaPredicted RBP19.99■□□□□ 0.79
PHF21A-214ENST00000530587 LMOD2Q6P5Q4 547 aa19.98■□□□□ 0.79
PHF21A-214ENST00000530587 GJD4Q96KN9 370 aaPredicted RBP19.98■□□□□ 0.79
PHF21A-214ENST00000530587 SLIT2O94813 1529 aa19.97■□□□□ 0.79
PHF21A-214ENST00000530587 ARHGEF28Q8N1W1 1705 aaKnown RBP19.97■□□□□ 0.79
PHF21A-214ENST00000530587 RGS12O14924 1447 aa19.96■□□□□ 0.79
PHF21A-214ENST00000530587 NBPF8Q3BBV2 869 aa19.96■□□□□ 0.79
PHF21A-214ENST00000530587 ATP7BP35670 1465 aa19.96■□□□□ 0.79
PHF21A-214ENST00000530587 POLR3AO14802 1390 aaPredicted RBP19.95■□□□□ 0.79
PHF21A-214ENST00000530587 FAM83GA6ND36 823 aa19.95■□□□□ 0.78
PHF21A-214ENST00000530587 HAP1P54257 671 aaPredicted RBP19.95■□□□□ 0.78
PHF21A-214ENST00000530587 ACEP12821 1306 aa19.93■□□□□ 0.78
PHF21A-214ENST00000530587 VPS72Q15906 364 aa19.92■□□□□ 0.78
PHF21A-214ENST00000530587 ONECUT3O60422 494 aaPredicted RBP19.91■□□□□ 0.78
PHF21A-214ENST00000530587 PAK3O75914 559 aaPredicted RBP19.9■□□□□ 0.78
PHF21A-214ENST00000530587 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
PHF21A-214ENST00000530587 TRPM3Q9HCF6 1732 aaPredicted RBP19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms