RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 ESCO1Q5FWF5 840 aa22.37■■□□□ 1.17
CAPN1-219ENST00000530495 FNBP4Q8N3X1 1017 aaPredicted RBP22.37■■□□□ 1.17
CAPN1-219ENST00000530495 USP21Q9UK80 565 aa22.37■■□□□ 1.17
CAPN1-219ENST00000530495 CDC42BPGQ6DT37 1551 aa22.37■■□□□ 1.17
CAPN1-219ENST00000530495 NPHP3Q7Z494 1330 aa22.36■■□□□ 1.17
CAPN1-219ENST00000530495 RGL3Q3MIN7 710 aa22.36■■□□□ 1.17
CAPN1-219ENST00000530495 CCDC144AA2RUR9 1427 aa22.36■■□□□ 1.17
CAPN1-219ENST00000530495 SPATA31E1Q6ZUB1 1445 aa22.35■■□□□ 1.17
CAPN1-219ENST00000530495 ANKRD30BQ9BXX2 1392 aa22.35■■□□□ 1.17
CAPN1-219ENST00000530495 MPHOSPH9Q99550 1183 aa22.34■■□□□ 1.17
CAPN1-219ENST00000530495 TRPC5Q9UL62 973 aaPredicted RBP22.34■■□□□ 1.17
CAPN1-219ENST00000530495 IFT172Q9UG01 1749 aa22.34■■□□□ 1.17
CAPN1-219ENST00000530495 TECPR2O15040 1411 aa22.33■■□□□ 1.17
CAPN1-219ENST00000530495 WAPLQ7Z5K2 1190 aa22.33■■□□□ 1.17
CAPN1-219ENST00000530495 STK26Q9P289 416 aa22.33■■□□□ 1.17
CAPN1-219ENST00000530495 FOXO3O43524 673 aa22.32■■□□□ 1.16
CAPN1-219ENST00000530495 LRPPRCP42704 1394 aaKnown RBP22.32■■□□□ 1.16
CAPN1-219ENST00000530495 ABCC11Q96J66 1382 aa22.32■■□□□ 1.16
CAPN1-219ENST00000530495 PXDNQ92626 1479 aa22.32■■□□□ 1.16
CAPN1-219ENST00000530495 MYOM2P54296 1465 aa22.3■■□□□ 1.16
CAPN1-219ENST00000530495 TMEM132EQ6IEE7 984 aa22.3■■□□□ 1.16
CAPN1-219ENST00000530495 ATRNO75882 1429 aa22.29■■□□□ 1.16
CAPN1-219ENST00000530495 XPCQ01831 940 aaPredicted RBP22.28■■□□□ 1.16
CAPN1-219ENST00000530495 KNDC1Q76NI1 1749 aa22.28■■□□□ 1.16
CAPN1-219ENST00000530495 MARF1Q9Y4F3 1742 aaKnown RBP22.28■■□□□ 1.16
CAPN1-219ENST00000530495 ATAD2Q6PL18 1390 aa22.27■■□□□ 1.16
CAPN1-219ENST00000530495 NUTM2FA1L443 756 aa22.27■■□□□ 1.16
CAPN1-219ENST00000530495 PIK3C2GO75747 1445 aa22.27■■□□□ 1.16
CAPN1-219ENST00000530495 BCL9LQ86UU0 1499 aa22.27■■□□□ 1.16
CAPN1-219ENST00000530495 SIRT1Q96EB6 747 aa22.26■■□□□ 1.15
CAPN1-219ENST00000530495 PLEKHH1Q9ULM0 1364 aa22.25■■□□□ 1.15
CAPN1-219ENST00000530495 YTHDC2Q9H6S0 1430 aaKnown RBP22.23■■□□□ 1.15
CAPN1-219ENST00000530495 FMN2Q9NZ56 1722 aa22.23■■□□□ 1.15
CAPN1-219ENST00000530495 C14orf93Q9H972 538 aaKnown RBP22.23■■□□□ 1.15
CAPN1-219ENST00000530495 ACIN1Q9UKV3 1341 aaKnown RBP22.23■■□□□ 1.15
CAPN1-219ENST00000530495 GJD4Q96KN9 370 aaPredicted RBP22.21■■□□□ 1.15
CAPN1-219ENST00000530495 SPATA31A3Q5VYP0 1347 aa22.21■■□□□ 1.15
CAPN1-219ENST00000530495 KIF1AQ12756 1690 aa22.2■■□□□ 1.14
CAPN1-219ENST00000530495 KRT28Q7Z3Y7 464 aa22.19■■□□□ 1.14
CAPN1-219ENST00000530495 RGPD8O14715 1765 aaPredicted RBP22.17■■□□□ 1.14
CAPN1-219ENST00000530495 NRXN1Q9ULB1 1477 aa22.17■■□□□ 1.14
CAPN1-219ENST00000530495 CCDC125Q86Z20 511 aa22.17■■□□□ 1.14
CAPN1-219ENST00000530495 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.17■■□□□ 1.14
CAPN1-219ENST00000530495 DHX57Q6P158 1386 aaKnown RBP22.16■■□□□ 1.14
CAPN1-219ENST00000530495 CFAP70Q5T0N1 1121 aa22.16■■□□□ 1.14
CAPN1-219ENST00000530495 UNC5CLQ8IV45 518 aa22.16■■□□□ 1.14
CAPN1-219ENST00000530495 PHF8Q9UPP1 1060 aa22.15■■□□□ 1.14
CAPN1-219ENST00000530495 SLIT2O94813 1529 aa22.15■■□□□ 1.14
CAPN1-219ENST00000530495 PSME1Q06323 249 aa22.14■■□□□ 1.13
CAPN1-219ENST00000530495 PRAM1Q96QH2 718 aa22.11■■□□□ 1.13
CAPN1-219ENST00000530495 RALGAPBQ86X10 1494 aa22.1■■□□□ 1.13
CAPN1-219ENST00000530495 USP32Q8NFA0 1604 aa22.1■■□□□ 1.13
CAPN1-219ENST00000530495 GLI3P10071 1580 aa22.1■■□□□ 1.13
CAPN1-219ENST00000530495 ZRANB1Q9UGI0 708 aa22.1■■□□□ 1.13
CAPN1-219ENST00000530495 TNS3Q68CZ2 1445 aa22.09■■□□□ 1.13
CAPN1-219ENST00000530495 EP400Q96L91 3159 aa22.09■■□□□ 1.13
CAPN1-219ENST00000530495 SBNO1A3KN83 1393 aa22.09■■□□□ 1.13
CAPN1-219ENST00000530495 DLC1Q96QB1 1528 aa22.07■■□□□ 1.12
CAPN1-219ENST00000530495 HAP1P54257 671 aaPredicted RBP22.07■■□□□ 1.12
CAPN1-219ENST00000530495 SAFB2Q14151 953 aaKnown RBP eCLIP22.07■■□□□ 1.12
CAPN1-219ENST00000530495 CABLES1Q8TDN4 633 aa22.07■■□□□ 1.12
CAPN1-219ENST00000530495 POGKQ9P215 609 aa22.06■■□□□ 1.12
CAPN1-219ENST00000530495 VPS72Q15906 364 aa22.05■■□□□ 1.12
CAPN1-219ENST00000530495 BRWD3Q6RI45 1802 aa22.04■■□□□ 1.12
CAPN1-219ENST00000530495 ARHGEF10O15013 1369 aa22.04■■□□□ 1.12
CAPN1-219ENST00000530495 ONECUT3O60422 494 aaPredicted RBP22.04■■□□□ 1.12
CAPN1-219ENST00000530495 ANKARQ7Z5J8 1434 aa22.04■■□□□ 1.12
CAPN1-219ENST00000530495 NWD2Q9ULI1 1742 aa22.03■■□□□ 1.12
CAPN1-219ENST00000530495 RAB3GAP2Q9H2M9 1393 aa22.02■■□□□ 1.12
CAPN1-219ENST00000530495 LMOD2Q6P5Q4 547 aa22.02■■□□□ 1.12
CAPN1-219ENST00000530495 SEPT12Q8IYM1 358 aa22.02■■□□□ 1.12
CAPN1-219ENST00000530495 PMFBP1Q8TBY8 1022 aa22.02■■□□□ 1.12
CAPN1-219ENST00000530495 BLMP54132 1417 aaPredicted RBP22.02■■□□□ 1.12
CAPN1-219ENST00000530495 ADGRB1O14514 1584 aa22.02■■□□□ 1.12
CAPN1-219ENST00000530495 ABCA3Q99758 1704 aa22.02■■□□□ 1.12
CAPN1-219ENST00000530495 PLCH1Q4KWH8 1693 aa22.01■■□□□ 1.11
CAPN1-219ENST00000530495 ADGRB2O60241 1585 aa22.01■■□□□ 1.11
CAPN1-219ENST00000530495 FAM83GA6ND36 823 aa22.01■■□□□ 1.11
CAPN1-219ENST00000530495 PLEKHG5O94827 1062 aa22■■□□□ 1.11
CAPN1-219ENST00000530495 TRAK1Q9UPV9 953 aa22■■□□□ 1.11
CAPN1-219ENST00000530495 STAC3Q96MF2 364 aa21.97■■□□□ 1.11
CAPN1-219ENST00000530495 HIRIP3Q9BW71 556 aaPredicted RBP21.97■■□□□ 1.11
CAPN1-219ENST00000530495 CCDC9Q9Y3X0 531 aaKnown RBP21.97■■□□□ 1.11
CAPN1-219ENST00000530495 TRPM3Q9HCF6 1732 aaPredicted RBP21.97■■□□□ 1.11
CAPN1-219ENST00000530495 SRCAPQ6ZRS2 3230 aa21.97■■□□□ 1.11
CAPN1-219ENST00000530495 DCAF11Q8TEB1 546 aa21.96■■□□□ 1.11
CAPN1-219ENST00000530495 KDM2AQ9Y2K7 1162 aa21.96■■□□□ 1.11
CAPN1-219ENST00000530495 MINK1Q8N4C8 1332 aaPredicted RBP21.95■■□□□ 1.1
CAPN1-219ENST00000530495 PRR36Q9H6K5 1346 aa21.95■■□□□ 1.1
CAPN1-219ENST00000530495 EIF3AQ14152 1382 aaKnown RBP21.95■■□□□ 1.1
CAPN1-219ENST00000530495 GPRASP1Q5JY77 1395 aa21.95■■□□□ 1.1
CAPN1-219ENST00000530495 WASLO00401 505 aaPredicted RBP21.94■■□□□ 1.1
CAPN1-219ENST00000530495 KRT27Q7Z3Y8 459 aa21.94■■□□□ 1.1
CAPN1-219ENST00000530495 DEFB132Q7Z7B7 95 aa21.94■■□□□ 1.1
CAPN1-219ENST00000530495 ALS2Q96Q42 1657 aa21.94■■□□□ 1.1
CAPN1-219ENST00000530495 SF3B2Q13435 895 aaKnown RBP21.93■■□□□ 1.1
CAPN1-219ENST00000530495 TULP4Q9NRJ4 1543 aa21.92■■□□□ 1.1
CAPN1-219ENST00000530495 NRAPQ86VF7 1730 aa21.92■■□□□ 1.1
CAPN1-219ENST00000530495 BTG4Q9NY30 223 aa21.91■■□□□ 1.1
CAPN1-219ENST00000530495 COL14A1Q05707 1796 aaKnown RBP21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms