RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 DLC1Q96QB1 1528 aa18.25■□□□□ 0.51
CCDC90B-216ENST00000529856 TRAK1Q9UPV9 953 aa18.25■□□□□ 0.51
CCDC90B-216ENST00000529856 KIAA1210Q9ULL0 1709 aa18.25■□□□□ 0.51
CCDC90B-216ENST00000529856 PRAM1Q96QH2 718 aa18.24■□□□□ 0.51
CCDC90B-216ENST00000529856 NBPF1Q3BBV0 1214 aa18.23■□□□□ 0.51
CCDC90B-216ENST00000529856 BRINP3Q76B58 766 aa18.22■□□□□ 0.51
CCDC90B-216ENST00000529856 POGKQ9P215 609 aa18.22■□□□□ 0.51
CCDC90B-216ENST00000529856 TONSLQ96HA7 1378 aa18.21■□□□□ 0.51
CCDC90B-216ENST00000529856 ADRA2BP18089 450 aa18.21■□□□□ 0.51
CCDC90B-216ENST00000529856 C1orf167Q5SNV9 1468 aa18.2■□□□□ 0.5
CCDC90B-216ENST00000529856 SAFB2Q14151 953 aaKnown RBP eCLIP18.2■□□□□ 0.5
CCDC90B-216ENST00000529856 CDC42BPGQ6DT37 1551 aa18.2■□□□□ 0.5
CCDC90B-216ENST00000529856 NBPF8Q3BBV2 869 aa18.18■□□□□ 0.5
CCDC90B-216ENST00000529856 CLSPNQ9HAW4 1339 aa18.17■□□□□ 0.5
CCDC90B-216ENST00000529856 PHLPP1O60346 1717 aa18.16■□□□□ 0.5
CCDC90B-216ENST00000529856 ORAI2Q96SN7 254 aa18.16■□□□□ 0.5
CCDC90B-216ENST00000529856 ARHGEF28Q8N1W1 1705 aaKnown RBP18.15■□□□□ 0.5
CCDC90B-216ENST00000529856 AHDC1Q5TGY3 1603 aaPredicted RBP18.15■□□□□ 0.5
CCDC90B-216ENST00000529856 TRPM1Q7Z4N2 1603 aa18.15■□□□□ 0.5
CCDC90B-216ENST00000529856 MINK1Q8N4C8 1332 aaPredicted RBP18.14■□□□□ 0.49
CCDC90B-216ENST00000529856 FMN2Q9NZ56 1722 aa18.13■□□□□ 0.49
CCDC90B-216ENST00000529856 NUTM2FA1L443 756 aa18.13■□□□□ 0.49
CCDC90B-216ENST00000529856 ESCO1Q5FWF5 840 aa18.12■□□□□ 0.49
CCDC90B-216ENST00000529856 HIRIP3Q9BW71 556 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-216ENST00000529856 COL16A1Q07092 1604 aaPredicted RBP18.12■□□□□ 0.49
CCDC90B-216ENST00000529856 DDX17Q92841 729 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-216ENST00000529856 ROCK2O75116 1388 aaKnown RBP18.11■□□□□ 0.49
CCDC90B-216ENST00000529856 ADGRB2O60241 1585 aa18.11■□□□□ 0.49
CCDC90B-216ENST00000529856 NHSL1Q5SYE7 1610 aa18.11■□□□□ 0.49
CCDC90B-216ENST00000529856 WASLO00401 505 aaPredicted RBP18.1■□□□□ 0.49
CCDC90B-216ENST00000529856 CCER1Q8TC90 406 aaPredicted RBP18.1■□□□□ 0.49
CCDC90B-216ENST00000529856 GPRASP1Q5JY77 1395 aa18.09■□□□□ 0.49
CCDC90B-216ENST00000529856 JCADQ9P266 1359 aa18.09■□□□□ 0.49
CCDC90B-216ENST00000529856 TIMELESSQ9UNS1 1208 aa18.09■□□□□ 0.49
CCDC90B-216ENST00000529856 RGPD8O14715 1765 aaPredicted RBP18.07■□□□□ 0.48
CCDC90B-216ENST00000529856 CENPJQ9HC77 1338 aaPredicted RBP18.07■□□□□ 0.48
CCDC90B-216ENST00000529856 LRRC59Q96AG4 307 aaKnown RBP18.07■□□□□ 0.48
CCDC90B-216ENST00000529856 SOS2Q07890 1332 aaPredicted RBP18.06■□□□□ 0.48
CCDC90B-216ENST00000529856 FOXO3O43524 673 aa18.06■□□□□ 0.48
CCDC90B-216ENST00000529856 RALGAPBQ86X10 1494 aa18.06■□□□□ 0.48
CCDC90B-216ENST00000529856 ANKARQ7Z5J8 1434 aa18.06■□□□□ 0.48
CCDC90B-216ENST00000529856 EIF3AQ14152 1382 aaKnown RBP18.05■□□□□ 0.48
CCDC90B-216ENST00000529856 NPHP3Q7Z494 1330 aa18.05■□□□□ 0.48
CCDC90B-216ENST00000529856 CARD11Q9BXL7 1154 aa18.05■□□□□ 0.48
CCDC90B-216ENST00000529856 PHF8Q9UPP1 1060 aa18.05■□□□□ 0.48
CCDC90B-216ENST00000529856 CDK19Q9BWU1 502 aa18.04■□□□□ 0.48
CCDC90B-216ENST00000529856 USP32Q8NFA0 1604 aa18.04■□□□□ 0.48
CCDC90B-216ENST00000529856 MED1Q15648 1581 aaPredicted RBP18.04■□□□□ 0.48
CCDC90B-216ENST00000529856 TULP4Q9NRJ4 1543 aa18.03■□□□□ 0.48
CCDC90B-216ENST00000529856 PRR36Q9H6K5 1346 aa18.03■□□□□ 0.48
CCDC90B-216ENST00000529856 DISP3Q9P2K9 1392 aa18.03■□□□□ 0.48
CCDC90B-216ENST00000529856 KIF1AQ12756 1690 aa18.03■□□□□ 0.48
CCDC90B-216ENST00000529856 SPATA31A6Q5VVP1 1343 aa18.01■□□□□ 0.47
CCDC90B-216ENST00000529856 NUDT16Q96DE0 195 aaKnown RBP18.01■□□□□ 0.47
CCDC90B-216ENST00000529856 SHPRHQ149N8 1683 aa18.01■□□□□ 0.47
CCDC90B-216ENST00000529856 QRICH2Q9H0J4 1663 aa18.01■□□□□ 0.47
CCDC90B-216ENST00000529856 XPCQ01831 940 aaPredicted RBP18■□□□□ 0.47
CCDC90B-216ENST00000529856 PMFBP1Q8TBY8 1022 aa18■□□□□ 0.47
CCDC90B-216ENST00000529856 PXDNQ92626 1479 aa18■□□□□ 0.47
CCDC90B-216ENST00000529856 KRT28Q7Z3Y7 464 aa17.99■□□□□ 0.47
CCDC90B-216ENST00000529856 PNPLA6Q8IY17 1366 aa17.99■□□□□ 0.47
CCDC90B-216ENST00000529856 ATP7BP35670 1465 aa17.97■□□□□ 0.47
CCDC90B-216ENST00000529856 PSME1Q06323 249 aa17.97■□□□□ 0.47
CCDC90B-216ENST00000529856 CCDC61Q9Y6R9 512 aa17.97■□□□□ 0.47
CCDC90B-216ENST00000529856 SRPK2P78362 688 aaKnown RBP17.96■□□□□ 0.47
CCDC90B-216ENST00000529856 CABP2Q9NPB3 220 aa17.96■□□□□ 0.47
CCDC90B-216ENST00000529856 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
CCDC90B-216ENST00000529856 SPATA31A3Q5VYP0 1347 aa17.95■□□□□ 0.46
CCDC90B-216ENST00000529856 ITSN1Q15811 1721 aa17.95■□□□□ 0.46
CCDC90B-216ENST00000529856 PLEKHG3A1L390 1219 aa17.94■□□□□ 0.46
CCDC90B-216ENST00000529856 NUTM2BA6NNL0 878 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-216ENST00000529856 NUTM2EB1AL46 878 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-216ENST00000529856 NUTM2AQ8IVF1 878 aaPredicted RBP17.94■□□□□ 0.46
CCDC90B-216ENST00000529856 NGDNQ8NEJ9 315 aaKnown RBP17.94■□□□□ 0.46
CCDC90B-216ENST00000529856 LRP6O75581 1613 aa17.94■□□□□ 0.46
CCDC90B-216ENST00000529856 SBNO1A3KN83 1393 aa17.93■□□□□ 0.46
CCDC90B-216ENST00000529856 SBNO2Q9Y2G9 1366 aa17.93■□□□□ 0.46
CCDC90B-216ENST00000529856 TOPAZ1Q8N9V7 1692 aa17.92■□□□□ 0.46
CCDC90B-216ENST00000529856 COL22A1Q8NFW1 1626 aaPredicted RBP17.9■□□□□ 0.46
CCDC90B-216ENST00000529856 ST20-MTHFSA0A0A6YYL1 179 aa17.9■□□□□ 0.46
CCDC90B-216ENST00000529856 MEX3CQ5U5Q3 659 aaKnown RBP17.9■□□□□ 0.46
CCDC90B-216ENST00000529856 RGS17Q9UGC6 210 aaPredicted RBP17.9■□□□□ 0.46
CCDC90B-216ENST00000529856 ACEP12821 1306 aa17.9■□□□□ 0.46
CCDC90B-216ENST00000529856 POLR3AO14802 1390 aaPredicted RBP17.9■□□□□ 0.46
CCDC90B-216ENST00000529856 PPIP5K1Q6PFW1 1433 aa17.89■□□□□ 0.46
CCDC90B-216ENST00000529856 TNS3Q68CZ2 1445 aa17.89■□□□□ 0.45
CCDC90B-216ENST00000529856 TESK2Q96S53 571 aa17.88■□□□□ 0.45
CCDC90B-216ENST00000529856 CABP1Q9NZU7 370 aa17.88■□□□□ 0.45
CCDC90B-216ENST00000529856 TRPM3Q9HCF6 1732 aaPredicted RBP17.87■□□□□ 0.45
CCDC90B-216ENST00000529856 USP47Q96K76 1375 aa17.87■□□□□ 0.45
CCDC90B-216ENST00000529856 SLC24A1O60721 1099 aa17.86■□□□□ 0.45
CCDC90B-216ENST00000529856 LMOD2Q6P5Q4 547 aa17.86■□□□□ 0.45
CCDC90B-216ENST00000529856 ARHGEF10O15013 1369 aa17.86■□□□□ 0.45
CCDC90B-216ENST00000529856 PAK3O75914 559 aaPredicted RBP17.85■□□□□ 0.45
CCDC90B-216ENST00000529856 ADAMTS2O95450 1211 aa17.85■□□□□ 0.45
CCDC90B-216ENST00000529856 ATAD2Q6PL18 1390 aa17.85■□□□□ 0.45
CCDC90B-216ENST00000529856 ILDR2Q71H61 639 aa17.85■□□□□ 0.45
CCDC90B-216ENST00000529856 PUS7Q96PZ0 661 aaKnown RBP17.84■□□□□ 0.45
CCDC90B-216ENST00000529856 ALS2Q96Q42 1657 aa17.83■□□□□ 0.45
CCDC90B-216ENST00000529856 C8orf37Q96NL8 207 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms