RNA–Protein interactions for RNA: ENST00000529795.1

PACS1-210, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 2

Gene PACS1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-210ENST00000529795 CDC42BPGQ6DT37 1551 aa18.43■□□□□ 0.54
PACS1-210ENST00000529795 WAPLQ7Z5K2 1190 aa18.42■□□□□ 0.54
PACS1-210ENST00000529795 POGKQ9P215 609 aa18.41■□□□□ 0.54
PACS1-210ENST00000529795 NHSL1Q5SYE7 1610 aa18.41■□□□□ 0.54
PACS1-210ENST00000529795 SHPRHQ149N8 1683 aa18.4■□□□□ 0.54
PACS1-210ENST00000529795 DLC1Q96QB1 1528 aa18.39■□□□□ 0.54
PACS1-210ENST00000529795 ESCO1Q5FWF5 840 aa18.37■□□□□ 0.53
PACS1-210ENST00000529795 ILDR2Q71H61 639 aa18.37■□□□□ 0.53
PACS1-210ENST00000529795 NPHP3Q7Z494 1330 aa18.37■□□□□ 0.53
PACS1-210ENST00000529795 PRAM1Q96QH2 718 aa18.36■□□□□ 0.53
PACS1-210ENST00000529795 KIAA1210Q9ULL0 1709 aa18.36■□□□□ 0.53
PACS1-210ENST00000529795 MEX3CQ5U5Q3 659 aaKnown RBP18.35■□□□□ 0.53
PACS1-210ENST00000529795 ORAI2Q96SN7 254 aa18.35■□□□□ 0.53
PACS1-210ENST00000529795 ADGRB1O14514 1584 aa18.34■□□□□ 0.53
PACS1-210ENST00000529795 TRAK1Q9UPV9 953 aa18.34■□□□□ 0.53
PACS1-210ENST00000529795 EIF3AQ14152 1382 aaKnown RBP18.33■□□□□ 0.53
PACS1-210ENST00000529795 PLEKHH1Q9ULM0 1364 aa18.33■□□□□ 0.53
PACS1-210ENST00000529795 FMN2Q9NZ56 1722 aa18.33■□□□□ 0.52
PACS1-210ENST00000529795 SOCS7O14512 581 aa18.33■□□□□ 0.52
PACS1-210ENST00000529795 SOS2Q07890 1332 aaPredicted RBP18.32■□□□□ 0.52
PACS1-210ENST00000529795 KIF1AQ12756 1690 aa18.31■□□□□ 0.52
PACS1-210ENST00000529795 SAFB2Q14151 953 aaKnown RBP eCLIP18.3■□□□□ 0.52
PACS1-210ENST00000529795 NUTM2FA1L443 756 aa18.28■□□□□ 0.52
PACS1-210ENST00000529795 FOXO3O43524 673 aa18.28■□□□□ 0.52
PACS1-210ENST00000529795 PSME1Q06323 249 aa18.28■□□□□ 0.52
PACS1-210ENST00000529795 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
PACS1-210ENST00000529795 ZNF772Q68DY9 489 aaPredicted RBP18.28■□□□□ 0.52
PACS1-210ENST00000529795 DDX17Q92841 729 aaKnown RBP18.28■□□□□ 0.52
PACS1-210ENST00000529795 ADGRB2O60241 1585 aa18.27■□□□□ 0.52
PACS1-210ENST00000529795 ANKARQ7Z5J8 1434 aa18.27■□□□□ 0.52
PACS1-210ENST00000529795 NUTM2BA6NNL0 878 aaPredicted RBP18.27■□□□□ 0.52
PACS1-210ENST00000529795 NUTM2EB1AL46 878 aaPredicted RBP18.27■□□□□ 0.52
PACS1-210ENST00000529795 NUTM2AQ8IVF1 878 aaPredicted RBP18.27■□□□□ 0.52
PACS1-210ENST00000529795 PNPLA6Q8IY17 1366 aa18.27■□□□□ 0.51
PACS1-210ENST00000529795 L3MBTL2Q969R5 705 aa18.26■□□□□ 0.51
PACS1-210ENST00000529795 PHF8Q9UPP1 1060 aa18.26■□□□□ 0.51
PACS1-210ENST00000529795 RGPD8O14715 1765 aaPredicted RBP18.25■□□□□ 0.51
PACS1-210ENST00000529795 SIN3AQ96ST3 1273 aa18.25■□□□□ 0.51
PACS1-210ENST00000529795 ARHGEF28Q8N1W1 1705 aaKnown RBP18.25■□□□□ 0.51
PACS1-210ENST00000529795 WASLO00401 505 aaPredicted RBP18.24■□□□□ 0.51
PACS1-210ENST00000529795 RGS17Q9UGC6 210 aaPredicted RBP18.24■□□□□ 0.51
PACS1-210ENST00000529795 MINK1Q8N4C8 1332 aaPredicted RBP18.23■□□□□ 0.51
PACS1-210ENST00000529795 KRT28Q7Z3Y7 464 aa18.22■□□□□ 0.51
PACS1-210ENST00000529795 LRP6O75581 1613 aa18.22■□□□□ 0.51
PACS1-210ENST00000529795 PXDNQ92626 1479 aa18.21■□□□□ 0.51
PACS1-210ENST00000529795 HIRIP3Q9BW71 556 aaPredicted RBP18.21■□□□□ 0.51
PACS1-210ENST00000529795 COL22A1Q8NFW1 1626 aaPredicted RBP18.2■□□□□ 0.5
PACS1-210ENST00000529795 TULP4Q9NRJ4 1543 aa18.2■□□□□ 0.5
PACS1-210ENST00000529795 ITSN1Q15811 1721 aa18.19■□□□□ 0.5
PACS1-210ENST00000529795 NBPF1Q3BBV0 1214 aa18.19■□□□□ 0.5
PACS1-210ENST00000529795 GPRASP1Q5JY77 1395 aa18.18■□□□□ 0.5
PACS1-210ENST00000529795 TONSLQ96HA7 1378 aa18.18■□□□□ 0.5
PACS1-210ENST00000529795 POTEAQ6S8J7 498 aa18.18■□□□□ 0.5
PACS1-210ENST00000529795 NGLY1Q96IV0 654 aa18.18■□□□□ 0.5
PACS1-210ENST00000529795 SPATA31A3Q5VYP0 1347 aa18.18■□□□□ 0.5
PACS1-210ENST00000529795 CENPJQ9HC77 1338 aaPredicted RBP18.18■□□□□ 0.5
PACS1-210ENST00000529795 XPCQ01831 940 aaPredicted RBP18.17■□□□□ 0.5
PACS1-210ENST00000529795 C8orf37Q96NL8 207 aa18.17■□□□□ 0.5
PACS1-210ENST00000529795 SBNO1A3KN83 1393 aa18.17■□□□□ 0.5
PACS1-210ENST00000529795 PMFBP1Q8TBY8 1022 aa18.16■□□□□ 0.5
PACS1-210ENST00000529795 AFF2P51816 1311 aa18.16■□□□□ 0.5
PACS1-210ENST00000529795 ARHGEF10O15013 1369 aa18.16■□□□□ 0.5
PACS1-210ENST00000529795 TRPM1Q7Z4N2 1603 aa18.16■□□□□ 0.5
PACS1-210ENST00000529795 ADAMTS2O95450 1211 aa18.15■□□□□ 0.5
PACS1-210ENST00000529795 NGDNQ8NEJ9 315 aaKnown RBP18.15■□□□□ 0.5
PACS1-210ENST00000529795 NUDT16Q96DE0 195 aaKnown RBP18.15■□□□□ 0.5
PACS1-210ENST00000529795 CDK19Q9BWU1 502 aa18.15■□□□□ 0.5
PACS1-210ENST00000529795 USP32Q8NFA0 1604 aa18.15■□□□□ 0.5
PACS1-210ENST00000529795 ROCK2O75116 1388 aaKnown RBP18.15■□□□□ 0.5
PACS1-210ENST00000529795 RXRBP28702 533 aa18.14■□□□□ 0.49
PACS1-210ENST00000529795 HAP1P54257 671 aaPredicted RBP18.14■□□□□ 0.49
PACS1-210ENST00000529795 TNS3Q68CZ2 1445 aa18.14■□□□□ 0.49
PACS1-210ENST00000529795 MARF1Q9Y4F3 1742 aaKnown RBP18.13■□□□□ 0.49
PACS1-210ENST00000529795 CCDC61Q9Y6R9 512 aa18.13■□□□□ 0.49
PACS1-210ENST00000529795 LMOD2Q6P5Q4 547 aa18.12■□□□□ 0.49
PACS1-210ENST00000529795 QTRT2Q9H974 415 aaKnown RBP18.11■□□□□ 0.49
PACS1-210ENST00000529795 PRR36Q9H6K5 1346 aa18.11■□□□□ 0.49
PACS1-210ENST00000529795 SRPK2P78362 688 aaKnown RBP18.1■□□□□ 0.49
PACS1-210ENST00000529795 QRICH2Q9H0J4 1663 aa18.09■□□□□ 0.49
PACS1-210ENST00000529795 ATP7BP35670 1465 aa18.09■□□□□ 0.49
PACS1-210ENST00000529795 EVC2Q86UK5 1308 aa18.09■□□□□ 0.49
PACS1-210ENST00000529795 CLSPNQ9HAW4 1339 aa18.09■□□□□ 0.49
PACS1-210ENST00000529795 RBM6P78332 1123 aaKnown RBP18.09■□□□□ 0.49
PACS1-210ENST00000529795 FNBP4Q8N3X1 1017 aaPredicted RBP18.09■□□□□ 0.49
PACS1-210ENST00000529795 USP21Q9UK80 565 aa18.09■□□□□ 0.49
PACS1-210ENST00000529795 TRPC5Q9UL62 973 aaPredicted RBP18.08■□□□□ 0.48
PACS1-210ENST00000529795 CDK12Q9NYV4 1490 aaPredicted RBP18.07■□□□□ 0.48
PACS1-210ENST00000529795 PLEKHG3A1L390 1219 aa18.07■□□□□ 0.48
PACS1-210ENST00000529795 SLC24A1O60721 1099 aa18.07■□□□□ 0.48
PACS1-210ENST00000529795 PAK3O75914 559 aaPredicted RBP18.07■□□□□ 0.48
PACS1-210ENST00000529795 CARD11Q9BXL7 1154 aa18.07■□□□□ 0.48
PACS1-210ENST00000529795 TIMELESSQ9UNS1 1208 aa18.06■□□□□ 0.48
PACS1-210ENST00000529795 BRD4O60885 1362 aaPredicted RBP18.05■□□□□ 0.48
PACS1-210ENST00000529795 TRPM3Q9HCF6 1732 aaPredicted RBP18.05■□□□□ 0.48
PACS1-210ENST00000529795 POLR3AO14802 1390 aaPredicted RBP18.04■□□□□ 0.48
PACS1-210ENST00000529795 ACEP12821 1306 aa18.04■□□□□ 0.48
PACS1-210ENST00000529795 TOPAZ1Q8N9V7 1692 aa18.04■□□□□ 0.48
PACS1-210ENST00000529795 NBPF8Q3BBV2 869 aa18.04■□□□□ 0.48
PACS1-210ENST00000529795 ALS2Q96Q42 1657 aa18.03■□□□□ 0.48
PACS1-210ENST00000529795 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms