RNA–Protein interactions for RNA: ENST00000529764.1

LTBP3-215, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

TSL 5

Gene LTBP3, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-215ENST00000529764 ASXL1Q8IXJ9 1541 aa9.56□□□□□ -0.88
LTBP3-215ENST00000529764 KNDC1Q76NI1 1749 aa9.56□□□□□ -0.88
LTBP3-215ENST00000529764 ILDR2Q71H61 639 aa9.56□□□□□ -0.88
LTBP3-215ENST00000529764 SIRT1Q96EB6 747 aa9.56□□□□□ -0.88
LTBP3-215ENST00000529764 KDM2AQ9Y2K7 1162 aa9.56□□□□□ -0.88
LTBP3-215ENST00000529764 COL16A1Q07092 1604 aaPredicted RBP9.56□□□□□ -0.88
LTBP3-215ENST00000529764 YTHDC2Q9H6S0 1430 aaKnown RBP9.56□□□□□ -0.88
LTBP3-215ENST00000529764 ESCO1Q5FWF5 840 aa9.55□□□□□ -0.88
LTBP3-215ENST00000529764 TMEM132EQ6IEE7 984 aa9.55□□□□□ -0.88
LTBP3-215ENST00000529764 TECPR2O15040 1411 aa9.55□□□□□ -0.88
LTBP3-215ENST00000529764 NPHP3Q7Z494 1330 aa9.55□□□□□ -0.88
LTBP3-215ENST00000529764 SHPRHQ149N8 1683 aa9.55□□□□□ -0.88
LTBP3-215ENST00000529764 C1orf167Q5SNV9 1468 aa9.54□□□□□ -0.88
LTBP3-215ENST00000529764 NHSL1Q5SYE7 1610 aa9.54□□□□□ -0.88
LTBP3-215ENST00000529764 CFAP70Q5T0N1 1121 aa9.54□□□□□ -0.88
LTBP3-215ENST00000529764 ZNF772Q68DY9 489 aaPredicted RBP9.54□□□□□ -0.88
LTBP3-215ENST00000529764 CDC42BPGQ6DT37 1551 aa9.54□□□□□ -0.88
LTBP3-215ENST00000529764 EIF3AQ14152 1382 aaKnown RBP9.53□□□□□ -0.88
LTBP3-215ENST00000529764 NUTM2BA6NNL0 878 aaPredicted RBP9.53□□□□□ -0.88
LTBP3-215ENST00000529764 NUTM2EB1AL46 878 aaPredicted RBP9.53□□□□□ -0.88
LTBP3-215ENST00000529764 NUTM2AQ8IVF1 878 aaPredicted RBP9.53□□□□□ -0.88
LTBP3-215ENST00000529764 NRXN1Q9ULB1 1477 aa9.53□□□□□ -0.88
LTBP3-215ENST00000529764 WAPLQ7Z5K2 1190 aa9.52□□□□□ -0.89
LTBP3-215ENST00000529764 CNKSR2Q8WXI2 1034 aa9.52□□□□□ -0.89
LTBP3-215ENST00000529764 PSME1Q06323 249 aa9.51□□□□□ -0.89
LTBP3-215ENST00000529764 PRAM1Q96QH2 718 aa9.51□□□□□ -0.89
LTBP3-215ENST00000529764 NUTM2FA1L443 756 aa9.5□□□□□ -0.89
LTBP3-215ENST00000529764 HAP1P54257 671 aaPredicted RBP9.5□□□□□ -0.89
LTBP3-215ENST00000529764 SAFB2Q14151 953 aaKnown RBP eCLIP9.5□□□□□ -0.89
LTBP3-215ENST00000529764 ORAI2Q96SN7 254 aa9.5□□□□□ -0.89
LTBP3-215ENST00000529764 RNF39Q9H2S5 420 aa9.5□□□□□ -0.89
LTBP3-215ENST00000529764 TRAK1Q9UPV9 953 aa9.5□□□□□ -0.89
LTBP3-215ENST00000529764 KIF1AQ12756 1690 aa9.5□□□□□ -0.89
LTBP3-215ENST00000529764 DLC1Q96QB1 1528 aa9.5□□□□□ -0.89
LTBP3-215ENST00000529764 RNF216Q9NWF9 866 aaPredicted RBP9.49□□□□□ -0.89
LTBP3-215ENST00000529764 SOS2Q07890 1332 aaPredicted RBP9.49□□□□□ -0.89
LTBP3-215ENST00000529764 FMN2Q9NZ56 1722 aa9.48□□□□□ -0.89
LTBP3-215ENST00000529764 FOXO3O43524 673 aa9.48□□□□□ -0.89
LTBP3-215ENST00000529764 TRIM26Q12899 539 aaPredicted RBP9.48□□□□□ -0.89
LTBP3-215ENST00000529764 DDX17Q92841 729 aaKnown RBP9.47□□□□□ -0.89
LTBP3-215ENST00000529764 NGLY1Q96IV0 654 aa9.47□□□□□ -0.89
LTBP3-215ENST00000529764 C8orf37Q96NL8 207 aa9.47□□□□□ -0.89
LTBP3-215ENST00000529764 PHF8Q9UPP1 1060 aa9.47□□□□□ -0.89
LTBP3-215ENST00000529764 KIAA1210Q9ULL0 1709 aa9.47□□□□□ -0.89
LTBP3-215ENST00000529764 PNPLA6Q8IY17 1366 aa9.47□□□□□ -0.89
LTBP3-215ENST00000529764 PLEKHH1Q9ULM0 1364 aa9.47□□□□□ -0.89
LTBP3-215ENST00000529764 ANKARQ7Z5J8 1434 aa9.47□□□□□ -0.89
LTBP3-215ENST00000529764 RXRBP28702 533 aa9.46□□□□□ -0.9
LTBP3-215ENST00000529764 GPRASP1Q5JY77 1395 aa9.46□□□□□ -0.9
LTBP3-215ENST00000529764 ADAMTS2O95450 1211 aa9.45□□□□□ -0.9
LTBP3-215ENST00000529764 NEUROD1Q13562 356 aa9.45□□□□□ -0.9
LTBP3-215ENST00000529764 LMOD2Q6P5Q4 547 aa9.45□□□□□ -0.9
LTBP3-215ENST00000529764 KRT28Q7Z3Y7 464 aa9.45□□□□□ -0.9
LTBP3-215ENST00000529764 AFF2P51816 1311 aa9.45□□□□□ -0.9
LTBP3-215ENST00000529764 MINK1Q8N4C8 1332 aaPredicted RBP9.45□□□□□ -0.9
LTBP3-215ENST00000529764 ADGRB1O14514 1584 aa9.45□□□□□ -0.9
LTBP3-215ENST00000529764 WASLO00401 505 aaPredicted RBP9.44□□□□□ -0.9
LTBP3-215ENST00000529764 POTEAQ6S8J7 498 aa9.44□□□□□ -0.9
LTBP3-215ENST00000529764 NGDNQ8NEJ9 315 aaKnown RBP9.44□□□□□ -0.9
LTBP3-215ENST00000529764 HIRIP3Q9BW71 556 aaPredicted RBP9.44□□□□□ -0.9
LTBP3-215ENST00000529764 RGS17Q9UGC6 210 aaPredicted RBP9.44□□□□□ -0.9
LTBP3-215ENST00000529764 ADGRB2O60241 1585 aa9.44□□□□□ -0.9
LTBP3-215ENST00000529764 LRP6O75581 1613 aa9.44□□□□□ -0.9
LTBP3-215ENST00000529764 ITSN1Q15811 1721 aa9.43□□□□□ -0.9
LTBP3-215ENST00000529764 ARHGEF10O15013 1369 aa9.43□□□□□ -0.9
LTBP3-215ENST00000529764 XPCQ01831 940 aaPredicted RBP9.43□□□□□ -0.9
LTBP3-215ENST00000529764 RGPD8O14715 1765 aaPredicted RBP9.42□□□□□ -0.9
LTBP3-215ENST00000529764 COL22A1Q8NFW1 1626 aaPredicted RBP9.42□□□□□ -0.9
LTBP3-215ENST00000529764 TULP4Q9NRJ4 1543 aa9.42□□□□□ -0.9
LTBP3-215ENST00000529764 TONSLQ96HA7 1378 aa9.42□□□□□ -0.9
LTBP3-215ENST00000529764 SPATA31A3Q5VYP0 1347 aa9.42□□□□□ -0.9
LTBP3-215ENST00000529764 RBM6P78332 1123 aaKnown RBP9.42□□□□□ -0.9
LTBP3-215ENST00000529764 PMFBP1Q8TBY8 1022 aa9.42□□□□□ -0.9
LTBP3-215ENST00000529764 QTRT2Q9H974 415 aaKnown RBP9.42□□□□□ -0.9
LTBP3-215ENST00000529764 USP21Q9UK80 565 aa9.42□□□□□ -0.9
LTBP3-215ENST00000529764 TRPC5Q9UL62 973 aaPredicted RBP9.42□□□□□ -0.9
LTBP3-215ENST00000529764 ARHGEF28Q8N1W1 1705 aaKnown RBP9.42□□□□□ -0.9
LTBP3-215ENST00000529764 PXDNQ92626 1479 aa9.41□□□□□ -0.9
LTBP3-215ENST00000529764 TNS3Q68CZ2 1445 aa9.41□□□□□ -0.9
LTBP3-215ENST00000529764 SBNO1A3KN83 1393 aa9.41□□□□□ -0.9
LTBP3-215ENST00000529764 CENPJQ9HC77 1338 aaPredicted RBP9.41□□□□□ -0.9
LTBP3-215ENST00000529764 L3MBTL2Q969R5 705 aa9.41□□□□□ -0.9
LTBP3-215ENST00000529764 ROCK2O75116 1388 aaKnown RBP9.4□□□□□ -0.9
LTBP3-215ENST00000529764 PAK3O75914 559 aaPredicted RBP9.4□□□□□ -0.9
LTBP3-215ENST00000529764 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
LTBP3-215ENST00000529764 C1QBPQ07021 282 aaKnown RBP9.4□□□□□ -0.9
LTBP3-215ENST00000529764 SIN3AQ96ST3 1273 aa9.4□□□□□ -0.9
LTBP3-215ENST00000529764 CDK12Q9NYV4 1490 aaPredicted RBP9.4□□□□□ -0.91
LTBP3-215ENST00000529764 MARF1Q9Y4F3 1742 aaKnown RBP9.39□□□□□ -0.91
LTBP3-215ENST00000529764 NUDT16Q96DE0 195 aaKnown RBP9.39□□□□□ -0.91
LTBP3-215ENST00000529764 CDK19Q9BWU1 502 aa9.39□□□□□ -0.91
LTBP3-215ENST00000529764 CCDC61Q9Y6R9 512 aa9.39□□□□□ -0.91
LTBP3-215ENST00000529764 EVC2Q86UK5 1308 aa9.38□□□□□ -0.91
LTBP3-215ENST00000529764 SLC24A1O60721 1099 aa9.38□□□□□ -0.91
LTBP3-215ENST00000529764 FNBP4Q8N3X1 1017 aaPredicted RBP9.38□□□□□ -0.91
LTBP3-215ENST00000529764 PLEKHG5O94827 1062 aa9.37□□□□□ -0.91
LTBP3-215ENST00000529764 NBPF1Q3BBV0 1214 aa9.37□□□□□ -0.91
LTBP3-215ENST00000529764 CCDC9Q9Y3X0 531 aaKnown RBP9.37□□□□□ -0.91
LTBP3-215ENST00000529764 TRPM1Q7Z4N2 1603 aa9.36□□□□□ -0.91
LTBP3-215ENST00000529764 USP32Q8NFA0 1604 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms