RNA–Protein interactions for RNA: ENST00000529558.1

AMBRA1-208, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 5

Gene AMBRA1, Length 483 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-208ENST00000529558 PNMA3Q9UL41 463 aa5.74□□□□□ -1.49
AMBRA1-208ENST00000529558 MAFBQ9Y5Q3 323 aaPredicted RBP5.74□□□□□ -1.49
AMBRA1-208ENST00000529558 RSPH4AQ5TD94 716 aa5.73□□□□□ -1.49
AMBRA1-208ENST00000529558 PACS2Q86VP3 889 aa5.73□□□□□ -1.49
AMBRA1-208ENST00000529558 EPS8L1Q8TE68 723 aa5.73□□□□□ -1.49
AMBRA1-208ENST00000529558 EIF2AK3Q9NZJ5 1116 aaKnown RBP5.73□□□□□ -1.49
AMBRA1-208ENST00000529558 RBM47A0AV96 593 aaKnown RBP5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 TRIM6-TRIM34B2RNG4 842 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 PPP1R3GB7ZBB8 358 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 CFAP99D6REC4 459 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 GUCA2AQ02747 115 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 ELOAQ14241 798 aaKnown RBP5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 ARSIQ5FYB1 569 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 B4GALNT3Q6L9W6 998 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 TBC1D9Q6ZT07 1266 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 KHSRPQ92945 711 aaKnown RBP eCLIP5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 BCL2L12Q9HB09 334 aa5.72□□□□□ -1.49
AMBRA1-208ENST00000529558 UNCXA6NJT0 531 aa5.71□□□□□ -1.5
AMBRA1-208ENST00000529558 ATP9BO43861 1147 aa5.71□□□□□ -1.5
AMBRA1-208ENST00000529558 KANK4Q5T7N3 995 aaPredicted RBP5.71□□□□□ -1.5
AMBRA1-208ENST00000529558 TSC1Q92574 1164 aa5.71□□□□□ -1.5
AMBRA1-208ENST00000529558 HLA-CQ95604 372 aa5.71□□□□□ -1.5
AMBRA1-208ENST00000529558 DCBLD2Q96PD2 775 aa5.71□□□□□ -1.5
AMBRA1-208ENST00000529558 GABBR2O75899 941 aa5.7□□□□□ -1.5
AMBRA1-208ENST00000529558 PTPREP23469 700 aa5.7□□□□□ -1.5
AMBRA1-208ENST00000529558 TXNDC2Q86VQ3 553 aa5.7□□□□□ -1.5
AMBRA1-208ENST00000529558 SLF2Q8IX21 1173 aa5.7□□□□□ -1.5
AMBRA1-208ENST00000529558 PNMA1Q8ND90 353 aa5.7□□□□□ -1.5
AMBRA1-208ENST00000529558 CCER1Q8TC90 406 aaPredicted RBP5.7□□□□□ -1.5
AMBRA1-208ENST00000529558 METRNQ9UJH8 293 aa5.7□□□□□ -1.5
AMBRA1-208ENST00000529558 SMAPO00193 183 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 SLC10A3P09131 477 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 EIF4G2P78344 907 aaKnown RBP eCLIP5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 NR6A1Q15406 480 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 PPP4R3BQ5MIZ7 849 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 GPR153Q6NV75 609 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 ZSWIM6Q9HCJ5 1215 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 IGSF5Q9NSI5 407 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 MYT1LQ9UL68 1186 aa5.69□□□□□ -1.5
AMBRA1-208ENST00000529558 PSDA5PKW4 1024 aaPredicted RBP5.68□□□□□ -1.5
AMBRA1-208ENST00000529558 C6orf229H3BNL8 230 aa5.68□□□□□ -1.5
AMBRA1-208ENST00000529558 DOK7Q18PE1 504 aa5.68□□□□□ -1.5
AMBRA1-208ENST00000529558 TMEM164Q5U3C3 297 aa5.68□□□□□ -1.5
AMBRA1-208ENST00000529558 PHLDB3Q6NSJ2 640 aa5.68□□□□□ -1.5
AMBRA1-208ENST00000529558 LHX6Q9UPM6 363 aa5.68□□□□□ -1.5
AMBRA1-208ENST00000529558 HOXB3P14651 431 aaPredicted RBP5.67□□□□□ -1.5
AMBRA1-208ENST00000529558 ERCC3P19447 782 aa5.67□□□□□ -1.5
AMBRA1-208ENST00000529558 GRIPAP1Q4V328 841 aa5.67□□□□□ -1.5
AMBRA1-208ENST00000529558 ZMIZ1Q9ULJ6 1067 aa5.67□□□□□ -1.5
AMBRA1-208ENST00000529558 ARID4AP29374 1257 aaPredicted RBP5.66□□□□□ -1.5
AMBRA1-208ENST00000529558 DNAJC14Q6Y2X3 702 aaPredicted RBP5.66□□□□□ -1.5
AMBRA1-208ENST00000529558 NFATC2IPQ8NCF5 419 aa5.66□□□□□ -1.5
AMBRA1-208ENST00000529558 STK32AQ8WU08 396 aa5.66□□□□□ -1.5
AMBRA1-208ENST00000529558 USP35Q9P2H5 1018 aa5.66□□□□□ -1.5
AMBRA1-208ENST00000529558 RIMBP2O15034 1052 aa5.65□□□□□ -1.5
AMBRA1-208ENST00000529558 PER1O15534 1290 aaPredicted RBP5.65□□□□□ -1.5
AMBRA1-208ENST00000529558 SSFA2P28290 1259 aa5.65□□□□□ -1.5
AMBRA1-208ENST00000529558 NR1H3Q13133 447 aa5.65□□□□□ -1.5
AMBRA1-208ENST00000529558 PROX2Q3B8N5 592 aa5.65□□□□□ -1.5
AMBRA1-208ENST00000529558 SYMPKQ92797 1274 aaKnown RBP5.65□□□□□ -1.5
AMBRA1-208ENST00000529558 NOVA2Q9UNW9 492 aaKnown RBP5.65□□□□□ -1.5
AMBRA1-208ENST00000529558 PIK3CDO00329 1044 aa5.64□□□□□ -1.51
AMBRA1-208ENST00000529558 FUT2Q10981 343 aa5.64□□□□□ -1.51
AMBRA1-208ENST00000529558 SWT1Q5T5J6 900 aaKnown RBP5.64□□□□□ -1.51
AMBRA1-208ENST00000529558 SIRT1Q96EB6 747 aa5.64□□□□□ -1.51
AMBRA1-208ENST00000529558 KIAA1522Q9P206 1035 aaPredicted RBP5.64□□□□□ -1.51
AMBRA1-208ENST00000529558 KIAA1468Q9P260 1216 aa5.64□□□□□ -1.51
AMBRA1-208ENST00000529558 FAM196BA6NMK8 535 aa5.63□□□□□ -1.51
AMBRA1-208ENST00000529558 ATP6V1AP38606 617 aa5.63□□□□□ -1.51
AMBRA1-208ENST00000529558 DESI1Q6ICB0 168 aa5.63□□□□□ -1.51
AMBRA1-208ENST00000529558 PLEKHM2Q8IWE5 1019 aa5.63□□□□□ -1.51
AMBRA1-208ENST00000529558 MRRFQ96E11 262 aaKnown RBP5.63□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L3A6NCW0 530 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L4A6NCW7 530 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 SOWAHDA6NJG2 315 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 FBXO45P0C2W1 286 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 SKIP12755 728 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 NOM1Q5C9Z4 860 aaKnown RBP5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L2Q6R6M4 530 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L1Q7RTZ2 530 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 SLAIN2Q9P270 581 aa5.62□□□□□ -1.51
AMBRA1-208ENST00000529558 ZBBXA8MT70 800 aa5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 ZNF16P17020 682 aaPredicted RBP5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 HDGFP51858 240 aaKnown RBP5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 FAM69CQ0P6D2 419 aa5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 CRTC2Q53ET0 693 aaPredicted RBP5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 LYPD8Q6UX82 237 aa5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 RETREG3Q86VR2 466 aa5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 CLP1Q92989 425 aaKnown RBP5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 MKRN1Q9UHC7 482 aaKnown RBP5.61□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L5A8MUK1 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L15C9J2P7 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L10C9JJH3 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L13C9JLJ4 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L12C9JPN9 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L11C9JVI0 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L21D6R901 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L18D6R9N7 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L22D6RA61 530 aa5.6□□□□□ -1.51
AMBRA1-208ENST00000529558 USP17L17D6RBQ6 530 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 143.1 ms