RNA–Protein interactions for RNA: ENST00000529553.1

AMBRA1-207, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 3

Gene AMBRA1, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-207ENST00000529553 NALCNQ8IZF0 1738 aa17.92■□□□□ 0.46
AMBRA1-207ENST00000529553 VGFO15240 615 aaPredicted RBP17.91■□□□□ 0.46
AMBRA1-207ENST00000529553 ESCO1Q5FWF5 840 aa17.91■□□□□ 0.46
AMBRA1-207ENST00000529553 ROBO2Q9HCK4 1378 aa17.91■□□□□ 0.46
AMBRA1-207ENST00000529553 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
AMBRA1-207ENST00000529553 LRPPRCP42704 1394 aaKnown RBP17.9■□□□□ 0.46
AMBRA1-207ENST00000529553 ONECUT3O60422 494 aaPredicted RBP17.89■□□□□ 0.45
AMBRA1-207ENST00000529553 HFM1A2PYH4 1435 aa17.89■□□□□ 0.45
AMBRA1-207ENST00000529553 RALGAPBQ86X10 1494 aa17.88■□□□□ 0.45
AMBRA1-207ENST00000529553 FOXO3O43524 673 aa17.87■□□□□ 0.45
AMBRA1-207ENST00000529553 LRP5O75197 1615 aa17.87■□□□□ 0.45
AMBRA1-207ENST00000529553 SEPT12Q8IYM1 358 aa17.86■□□□□ 0.45
AMBRA1-207ENST00000529553 PXDNQ92626 1479 aa17.86■□□□□ 0.45
AMBRA1-207ENST00000529553 SLIT2O94813 1529 aa17.86■□□□□ 0.45
AMBRA1-207ENST00000529553 HRCP23327 699 aa17.85■□□□□ 0.45
AMBRA1-207ENST00000529553 NEXMIFQ5QGS0 1516 aa17.85■□□□□ 0.45
AMBRA1-207ENST00000529553 RPGRIP1LQ68CZ1 1315 aa17.84■□□□□ 0.45
AMBRA1-207ENST00000529553 VPS72Q15906 364 aa17.84■□□□□ 0.45
AMBRA1-207ENST00000529553 BAG6P46379 1132 aa17.82■□□□□ 0.44
AMBRA1-207ENST00000529553 KRT27Q7Z3Y8 459 aa17.82■□□□□ 0.44
AMBRA1-207ENST00000529553 SPATA31A3Q5VYP0 1347 aa17.81■□□□□ 0.44
AMBRA1-207ENST00000529553 XPCQ01831 940 aaPredicted RBP17.81■□□□□ 0.44
AMBRA1-207ENST00000529553 GLI3P10071 1580 aa17.81■□□□□ 0.44
AMBRA1-207ENST00000529553 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.81■□□□□ 0.44
AMBRA1-207ENST00000529553 SPHKAPQ2M3C7 1700 aa17.8■□□□□ 0.44
AMBRA1-207ENST00000529553 MARF1Q9Y4F3 1742 aaKnown RBP17.78■□□□□ 0.44
AMBRA1-207ENST00000529553 PSDA5PKW4 1024 aaPredicted RBP17.78■□□□□ 0.44
AMBRA1-207ENST00000529553 CDC42BPGQ6DT37 1551 aa17.76■□□□□ 0.43
AMBRA1-207ENST00000529553 KRT28Q7Z3Y7 464 aa17.76■□□□□ 0.43
AMBRA1-207ENST00000529553 HAP1P54257 671 aaPredicted RBP17.74■□□□□ 0.43
AMBRA1-207ENST00000529553 PSME1Q06323 249 aa17.74■□□□□ 0.43
AMBRA1-207ENST00000529553 CCDC9Q9Y3X0 531 aaKnown RBP17.74■□□□□ 0.43
AMBRA1-207ENST00000529553 CCDC144AA2RUR9 1427 aa17.73■□□□□ 0.43
AMBRA1-207ENST00000529553 NAIPQ13075 1403 aa17.72■□□□□ 0.43
AMBRA1-207ENST00000529553 CLTCL1P53675 1640 aa17.72■□□□□ 0.43
AMBRA1-207ENST00000529553 NUTM2FA1L443 756 aa17.71■□□□□ 0.43
AMBRA1-207ENST00000529553 WAPLQ7Z5K2 1190 aa17.71■□□□□ 0.43
AMBRA1-207ENST00000529553 BRWD3Q6RI45 1802 aa17.7■□□□□ 0.42
AMBRA1-207ENST00000529553 ITGAEP38570 1179 aa17.7■□□□□ 0.42
AMBRA1-207ENST00000529553 EN1Q05925 392 aaPredicted RBP17.7■□□□□ 0.42
AMBRA1-207ENST00000529553 R3HDM1Q15032 1099 aaKnown RBP17.7■□□□□ 0.42
AMBRA1-207ENST00000529553 FAM83GA6ND36 823 aa17.69■□□□□ 0.42
AMBRA1-207ENST00000529553 TECPR2O15040 1411 aa17.69■□□□□ 0.42
AMBRA1-207ENST00000529553 USP32Q8NFA0 1604 aa17.69■□□□□ 0.42
AMBRA1-207ENST00000529553 ABCC11Q96J66 1382 aa17.68■□□□□ 0.42
AMBRA1-207ENST00000529553 SIRT1Q96EB6 747 aa17.68■□□□□ 0.42
AMBRA1-207ENST00000529553 YY1P25490 414 aa17.67■□□□□ 0.42
AMBRA1-207ENST00000529553 CABLES1Q8TDN4 633 aa17.67■□□□□ 0.42
AMBRA1-207ENST00000529553 KIF1BO60333 1816 aa17.67■□□□□ 0.42
AMBRA1-207ENST00000529553 SBNO1A3KN83 1393 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 DISP2A7MBM2 1401 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 TNS3Q68CZ2 1445 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 A0A0G2JS52 829 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 MYT1Q01538 1121 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 FAM98CQ17RN3 349 aaKnown RBP17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 STK26Q9P289 416 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 PHF8Q9UPP1 1060 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 ARHGEF10O15013 1369 aa17.66■□□□□ 0.42
AMBRA1-207ENST00000529553 NWD2Q9ULI1 1742 aa17.64■□□□□ 0.41
AMBRA1-207ENST00000529553 KIF1AQ12756 1690 aa17.62■□□□□ 0.41
AMBRA1-207ENST00000529553 ADGRF5Q8IZF2 1346 aa17.62■□□□□ 0.41
AMBRA1-207ENST00000529553 CAMKK2Q96RR4 588 aa17.61■□□□□ 0.41
AMBRA1-207ENST00000529553 BTG4Q9NY30 223 aa17.61■□□□□ 0.41
AMBRA1-207ENST00000529553 EZH2Q15910 746 aaKnown RBP17.6■□□□□ 0.41
AMBRA1-207ENST00000529553 LMOD2Q6P5Q4 547 aa17.6■□□□□ 0.41
AMBRA1-207ENST00000529553 PLEKHH1Q9ULM0 1364 aa17.6■□□□□ 0.41
AMBRA1-207ENST00000529553 PARD3Q8TEW0 1356 aa17.59■□□□□ 0.41
AMBRA1-207ENST00000529553 SPATA31A5Q5VU36 1347 aa17.59■□□□□ 0.41
AMBRA1-207ENST00000529553 SPATA31A7Q8IWB4 1347 aa17.59■□□□□ 0.41
AMBRA1-207ENST00000529553 TMEM132EQ6IEE7 984 aa17.59■□□□□ 0.41
AMBRA1-207ENST00000529553 ANKRD30BQ9BXX2 1392 aa17.58■□□□□ 0.4
AMBRA1-207ENST00000529553 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
AMBRA1-207ENST00000529553 FAM196AQ6ZSG2 479 aa17.58■□□□□ 0.4
AMBRA1-207ENST00000529553 SLC4A1APQ9BWU0 796 aaKnown RBP17.57■□□□□ 0.4
AMBRA1-207ENST00000529553 PLCH1Q4KWH8 1693 aa17.57■□□□□ 0.4
AMBRA1-207ENST00000529553 NRXN1Q9ULB1 1477 aa17.56■□□□□ 0.4
AMBRA1-207ENST00000529553 RRBP1Q9P2E9 1410 aaKnown RBP17.56■□□□□ 0.4
AMBRA1-207ENST00000529553 FMN2Q9NZ56 1722 aa17.56■□□□□ 0.4
AMBRA1-207ENST00000529553 PLEKHG5O94827 1062 aa17.56■□□□□ 0.4
AMBRA1-207ENST00000529553 FAM182BQ5T319 152 aa17.56■□□□□ 0.4
AMBRA1-207ENST00000529553 PPLO60437 1756 aa17.56■□□□□ 0.4
AMBRA1-207ENST00000529553 RGPD1P0DJD0 1748 aa17.55■□□□□ 0.4
AMBRA1-207ENST00000529553 YTHDC2Q9H6S0 1430 aaKnown RBP17.55■□□□□ 0.4
AMBRA1-207ENST00000529553 NBPF8Q3BBV2 869 aa17.54■□□□□ 0.4
AMBRA1-207ENST00000529553 NBPF14Q5TI25 921 aa17.54■□□□□ 0.4
AMBRA1-207ENST00000529553 APBA3O96018 575 aa17.53■□□□□ 0.4
AMBRA1-207ENST00000529553 TRIM37O94972 964 aa17.52■□□□□ 0.4
AMBRA1-207ENST00000529553 RGL3Q3MIN7 710 aa17.52■□□□□ 0.4
AMBRA1-207ENST00000529553 C14orf93Q9H972 538 aaKnown RBP17.51■□□□□ 0.39
AMBRA1-207ENST00000529553 SPON1Q9HCB6 807 aa17.51■□□□□ 0.39
AMBRA1-207ENST00000529553 PMFBP1Q8TBY8 1022 aa17.5■□□□□ 0.39
AMBRA1-207ENST00000529553 KNDC1Q76NI1 1749 aa17.5■□□□□ 0.39
AMBRA1-207ENST00000529553 SPATA31A1Q5TZJ5 1347 aa17.49■□□□□ 0.39
AMBRA1-207ENST00000529553 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
AMBRA1-207ENST00000529553 ANKARQ7Z5J8 1434 aa17.49■□□□□ 0.39
AMBRA1-207ENST00000529553 PPP1R1BQ9UD71 204 aaPredicted RBP17.49■□□□□ 0.39
AMBRA1-207ENST00000529553 GPRASP1Q5JY77 1395 aa17.49■□□□□ 0.39
AMBRA1-207ENST00000529553 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
AMBRA1-207ENST00000529553 SPATA31E1Q6ZUB1 1445 aa17.48■□□□□ 0.39
AMBRA1-207ENST00000529553 NRAPQ86VF7 1730 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms