RNA–Protein interactions for RNA: ENST00000529347.1

CDKL1-206, Transcript of cyclin dependent kinase like 1, humanhuman

TSL 2

Gene CDKL1, Length 673 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL1-206ENST00000529347 C19orf44Q9H6X5 657 aa20.14■□□□□ 0.81
CDKL1-206ENST00000529347 FAM135BQ49AJ0 1406 aa20.12■□□□□ 0.81
CDKL1-206ENST00000529347 RALGAPBQ86X10 1494 aa20.11■□□□□ 0.81
CDKL1-206ENST00000529347 TIMELESSQ9UNS1 1208 aa20.1■□□□□ 0.81
CDKL1-206ENST00000529347 ILDR1Q86SU0 546 aaPredicted RBP20.09■□□□□ 0.81
CDKL1-206ENST00000529347 CADPS2Q86UW7 1296 aa20.09■□□□□ 0.81
CDKL1-206ENST00000529347 QRICH2Q9H0J4 1663 aa20.08■□□□□ 0.81
CDKL1-206ENST00000529347 SIRT1Q96EB6 747 aa20.08■□□□□ 0.81
CDKL1-206ENST00000529347 CARD11Q9BXL7 1154 aa20.08■□□□□ 0.81
CDKL1-206ENST00000529347 DCCP43146 1447 aa20.08■□□□□ 0.8
CDKL1-206ENST00000529347 MINK1Q8N4C8 1332 aaPredicted RBP20.07■□□□□ 0.8
CDKL1-206ENST00000529347 ROBO1Q9Y6N7 1651 aa20.07■□□□□ 0.8
CDKL1-206ENST00000529347 HIRIP3Q9BW71 556 aaPredicted RBP20.07■□□□□ 0.8
CDKL1-206ENST00000529347 CDC42BPGQ6DT37 1551 aa20.07■□□□□ 0.8
CDKL1-206ENST00000529347 SLAIN2Q9P270 581 aa20.06■□□□□ 0.8
CDKL1-206ENST00000529347 NUTM2FA1L443 756 aa20.05■□□□□ 0.8
CDKL1-206ENST00000529347 RGPD8O14715 1765 aaPredicted RBP20.05■□□□□ 0.8
CDKL1-206ENST00000529347 FMN2Q9NZ56 1722 aa20.05■□□□□ 0.8
CDKL1-206ENST00000529347 GPRASP1Q5JY77 1395 aa20.04■□□□□ 0.8
CDKL1-206ENST00000529347 MST1RQ04912 1400 aa20.03■□□□□ 0.8
CDKL1-206ENST00000529347 CENPJQ9HC77 1338 aaPredicted RBP20.02■□□□□ 0.8
CDKL1-206ENST00000529347 ADGRB2O60241 1585 aa20.02■□□□□ 0.8
CDKL1-206ENST00000529347 EIF3AQ14152 1382 aaKnown RBP20.01■□□□□ 0.79
CDKL1-206ENST00000529347 C1orf167Q5SNV9 1468 aa19.99■□□□□ 0.79
CDKL1-206ENST00000529347 PHLPP1O60346 1717 aa19.97■□□□□ 0.79
CDKL1-206ENST00000529347 HSPA1LP34931 641 aa19.96■□□□□ 0.79
CDKL1-206ENST00000529347 BRINP3Q76B58 766 aa19.96■□□□□ 0.79
CDKL1-206ENST00000529347 WASLO00401 505 aaPredicted RBP19.95■□□□□ 0.78
CDKL1-206ENST00000529347 ESCO1Q5FWF5 840 aa19.95■□□□□ 0.78
CDKL1-206ENST00000529347 ORAI2Q96SN7 254 aa19.95■□□□□ 0.78
CDKL1-206ENST00000529347 USP32Q8NFA0 1604 aa19.94■□□□□ 0.78
CDKL1-206ENST00000529347 CDK19Q9BWU1 502 aa19.93■□□□□ 0.78
CDKL1-206ENST00000529347 USP47Q96K76 1375 aa19.93■□□□□ 0.78
CDKL1-206ENST00000529347 TULP4Q9NRJ4 1543 aa19.92■□□□□ 0.78
CDKL1-206ENST00000529347 NHSL1Q5SYE7 1610 aa19.92■□□□□ 0.78
CDKL1-206ENST00000529347 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
CDKL1-206ENST00000529347 ITSN1Q15811 1721 aa19.92■□□□□ 0.78
CDKL1-206ENST00000529347 ST20-MTHFSA0A0A6YYL1 179 aa19.9■□□□□ 0.78
CDKL1-206ENST00000529347 SRPK2P78362 688 aaKnown RBP19.9■□□□□ 0.78
CDKL1-206ENST00000529347 KIF1AQ12756 1690 aa19.9■□□□□ 0.78
CDKL1-206ENST00000529347 AHDC1Q5TGY3 1603 aaPredicted RBP19.89■□□□□ 0.77
CDKL1-206ENST00000529347 ANKARQ7Z5J8 1434 aa19.89■□□□□ 0.77
CDKL1-206ENST00000529347 PRR36Q9H6K5 1346 aa19.89■□□□□ 0.77
CDKL1-206ENST00000529347 CABP2Q9NPB3 220 aa19.89■□□□□ 0.77
CDKL1-206ENST00000529347 ATP7BP35670 1465 aa19.87■□□□□ 0.77
CDKL1-206ENST00000529347 EVC2Q86UK5 1308 aa19.87■□□□□ 0.77
CDKL1-206ENST00000529347 PMFBP1Q8TBY8 1022 aa19.87■□□□□ 0.77
CDKL1-206ENST00000529347 NUDT16Q96DE0 195 aaKnown RBP19.87■□□□□ 0.77
CDKL1-206ENST00000529347 COL16A1Q07092 1604 aaPredicted RBP19.87■□□□□ 0.77
CDKL1-206ENST00000529347 PHF8Q9UPP1 1060 aa19.86■□□□□ 0.77
CDKL1-206ENST00000529347 TOPAZ1Q8N9V7 1692 aa19.86■□□□□ 0.77
CDKL1-206ENST00000529347 FOXO3O43524 673 aa19.85■□□□□ 0.77
CDKL1-206ENST00000529347 XPCQ01831 940 aaPredicted RBP19.85■□□□□ 0.77
CDKL1-206ENST00000529347 SBNO2Q9Y2G9 1366 aa19.83■□□□□ 0.76
CDKL1-206ENST00000529347 NPHP3Q7Z494 1330 aa19.81■□□□□ 0.76
CDKL1-206ENST00000529347 EIF4G2P78344 907 aaKnown RBP eCLIP19.81■□□□□ 0.76
CDKL1-206ENST00000529347 TESK2Q96S53 571 aa19.81■□□□□ 0.76
CDKL1-206ENST00000529347 PPIP5K1Q6PFW1 1433 aa19.8■□□□□ 0.76
CDKL1-206ENST00000529347 HSPA5P11021 654 aaKnown RBP19.8■□□□□ 0.76
CDKL1-206ENST00000529347 NGDNQ8NEJ9 315 aaKnown RBP19.8■□□□□ 0.76
CDKL1-206ENST00000529347 CCDC61Q9Y6R9 512 aa19.79■□□□□ 0.76
CDKL1-206ENST00000529347 PXDNQ92626 1479 aa19.79■□□□□ 0.76
CDKL1-206ENST00000529347 PSME1Q06323 249 aa19.78■□□□□ 0.76
CDKL1-206ENST00000529347 DISP3Q9P2K9 1392 aa19.78■□□□□ 0.76
CDKL1-206ENST00000529347 KRT28Q7Z3Y7 464 aa19.77■□□□□ 0.76
CDKL1-206ENST00000529347 SOS2Q07890 1332 aaPredicted RBP19.76■□□□□ 0.75
CDKL1-206ENST00000529347 SHPRHQ149N8 1683 aa19.76■□□□□ 0.75
CDKL1-206ENST00000529347 TMF1P82094 1093 aa19.76■□□□□ 0.75
CDKL1-206ENST00000529347 CABP1Q9NZU7 370 aa19.76■□□□□ 0.75
CDKL1-206ENST00000529347 ATAD2Q6PL18 1390 aa19.75■□□□□ 0.75
CDKL1-206ENST00000529347 JCADQ9P266 1359 aa19.75■□□□□ 0.75
CDKL1-206ENST00000529347 LRRC59Q96AG4 307 aaKnown RBP19.75■□□□□ 0.75
CDKL1-206ENST00000529347 ACEP12821 1306 aa19.75■□□□□ 0.75
CDKL1-206ENST00000529347 TMC1Q8TDI8 760 aa19.74■□□□□ 0.75
CDKL1-206ENST00000529347 TRPM3Q9HCF6 1732 aaPredicted RBP19.73■□□□□ 0.75
CDKL1-206ENST00000529347 AKAP12Q02952 1782 aa19.73■□□□□ 0.75
CDKL1-206ENST00000529347 PLEKHG5O94827 1062 aa19.73■□□□□ 0.75
CDKL1-206ENST00000529347 LMOD2Q6P5Q4 547 aa19.73■□□□□ 0.75
CDKL1-206ENST00000529347 POLR3GLQ9BT43 218 aa19.73■□□□□ 0.75
CDKL1-206ENST00000529347 PLEKHG3A1L390 1219 aa19.72■□□□□ 0.75
CDKL1-206ENST00000529347 SLC24A1O60721 1099 aa19.72■□□□□ 0.75
CDKL1-206ENST00000529347 PAK3O75914 559 aaPredicted RBP19.72■□□□□ 0.75
CDKL1-206ENST00000529347 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
CDKL1-206ENST00000529347 PNPLA6Q8IY17 1366 aa19.7■□□□□ 0.74
CDKL1-206ENST00000529347 TNS3Q68CZ2 1445 aa19.69■□□□□ 0.74
CDKL1-206ENST00000529347 NUTM2BA6NNL0 878 aaPredicted RBP19.69■□□□□ 0.74
CDKL1-206ENST00000529347 NUTM2EB1AL46 878 aaPredicted RBP19.69■□□□□ 0.74
CDKL1-206ENST00000529347 NUTM2AQ8IVF1 878 aaPredicted RBP19.69■□□□□ 0.74
CDKL1-206ENST00000529347 SLC12A5Q9H2X9 1139 aa19.68■□□□□ 0.74
CDKL1-206ENST00000529347 SPATA31A3Q5VYP0 1347 aa19.68■□□□□ 0.74
CDKL1-206ENST00000529347 ALS2Q96Q42 1657 aa19.68■□□□□ 0.74
CDKL1-206ENST00000529347 MED1Q15648 1581 aaPredicted RBP19.67■□□□□ 0.74
CDKL1-206ENST00000529347 CDCA8Q53HL2 280 aa19.67■□□□□ 0.74
CDKL1-206ENST00000529347 MON2Q7Z3U7 1717 aa19.67■□□□□ 0.74
CDKL1-206ENST00000529347 SBNO1A3KN83 1393 aa19.67■□□□□ 0.74
CDKL1-206ENST00000529347 MYOM1P52179 1685 aa19.66■□□□□ 0.74
CDKL1-206ENST00000529347 COL22A1Q8NFW1 1626 aaPredicted RBP19.65■□□□□ 0.74
CDKL1-206ENST00000529347 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
CDKL1-206ENST00000529347 PUS7Q96PZ0 661 aaKnown RBP19.65■□□□□ 0.74
CDKL1-206ENST00000529347 NUTM2GQ5VZR2 741 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms