RNA–Protein interactions for RNA: ENST00000529210.1

COPB1-206, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 4

Gene COPB1, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-206ENST00000529210 TMEM132EQ6IEE7 984 aa17.69■□□□□ 0.42
COPB1-206ENST00000529210 ADGRB1O14514 1584 aa17.69■□□□□ 0.42
COPB1-206ENST00000529210 CFAP70Q5T0N1 1121 aa17.68■□□□□ 0.42
COPB1-206ENST00000529210 LRP6O75581 1613 aa17.68■□□□□ 0.42
COPB1-206ENST00000529210 LRRC59Q96AG4 307 aaKnown RBP17.67■□□□□ 0.42
COPB1-206ENST00000529210 WAPLQ7Z5K2 1190 aa17.66■□□□□ 0.42
COPB1-206ENST00000529210 STK26Q9P289 416 aa17.66■□□□□ 0.42
COPB1-206ENST00000529210 SOS2Q07890 1332 aaPredicted RBP17.66■□□□□ 0.42
COPB1-206ENST00000529210 PLEKHH1Q9ULM0 1364 aa17.66■□□□□ 0.42
COPB1-206ENST00000529210 FMN2Q9NZ56 1722 aa17.65■□□□□ 0.42
COPB1-206ENST00000529210 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
COPB1-206ENST00000529210 DCAF11Q8TEB1 546 aa17.63■□□□□ 0.41
COPB1-206ENST00000529210 PNPLA6Q8IY17 1366 aa17.63■□□□□ 0.41
COPB1-206ENST00000529210 ADGRB2O60241 1585 aa17.62■□□□□ 0.41
COPB1-206ENST00000529210 POTEAQ6S8J7 498 aa17.6■□□□□ 0.41
COPB1-206ENST00000529210 DDX17Q92841 729 aaKnown RBP17.6■□□□□ 0.41
COPB1-206ENST00000529210 NPHP3Q7Z494 1330 aa17.6■□□□□ 0.41
COPB1-206ENST00000529210 COL22A1Q8NFW1 1626 aaPredicted RBP17.6■□□□□ 0.41
COPB1-206ENST00000529210 KIF1AQ12756 1690 aa17.6■□□□□ 0.41
COPB1-206ENST00000529210 KIAA1210Q9ULL0 1709 aa17.6■□□□□ 0.41
COPB1-206ENST00000529210 PXDNQ92626 1479 aa17.59■□□□□ 0.41
COPB1-206ENST00000529210 ESCO1Q5FWF5 840 aa17.57■□□□□ 0.4
COPB1-206ENST00000529210 PRAM1Q96QH2 718 aa17.57■□□□□ 0.4
COPB1-206ENST00000529210 KDM2AQ9Y2K7 1162 aa17.57■□□□□ 0.4
COPB1-206ENST00000529210 ZNF772Q68DY9 489 aaPredicted RBP17.56■□□□□ 0.4
COPB1-206ENST00000529210 ANKARQ7Z5J8 1434 aa17.55■□□□□ 0.4
COPB1-206ENST00000529210 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
COPB1-206ENST00000529210 MEX3CQ5U5Q3 659 aaKnown RBP17.54■□□□□ 0.4
COPB1-206ENST00000529210 RGPD8O14715 1765 aaPredicted RBP17.53■□□□□ 0.4
COPB1-206ENST00000529210 USP32Q8NFA0 1604 aa17.53■□□□□ 0.4
COPB1-206ENST00000529210 FOXO3O43524 673 aa17.52■□□□□ 0.4
COPB1-206ENST00000529210 POGKQ9P215 609 aa17.52■□□□□ 0.4
COPB1-206ENST00000529210 TRAK1Q9UPV9 953 aa17.52■□□□□ 0.4
COPB1-206ENST00000529210 EIF3AQ14152 1382 aaKnown RBP17.51■□□□□ 0.39
COPB1-206ENST00000529210 NUTM2BA6NNL0 878 aaPredicted RBP17.5■□□□□ 0.39
COPB1-206ENST00000529210 NUTM2EB1AL46 878 aaPredicted RBP17.5■□□□□ 0.39
COPB1-206ENST00000529210 NUTM2AQ8IVF1 878 aaPredicted RBP17.5■□□□□ 0.39
COPB1-206ENST00000529210 TULP4Q9NRJ4 1543 aa17.5■□□□□ 0.39
COPB1-206ENST00000529210 NUTM2FA1L443 756 aa17.49■□□□□ 0.39
COPB1-206ENST00000529210 ADRA2BP18089 450 aa17.49■□□□□ 0.39
COPB1-206ENST00000529210 CDK12Q9NYV4 1490 aaPredicted RBP17.49■□□□□ 0.39
COPB1-206ENST00000529210 SPATA31A3Q5VYP0 1347 aa17.48■□□□□ 0.39
COPB1-206ENST00000529210 SAFB2Q14151 953 aaKnown RBP eCLIP17.48■□□□□ 0.39
COPB1-206ENST00000529210 PHF8Q9UPP1 1060 aa17.48■□□□□ 0.39
COPB1-206ENST00000529210 AFF2P51816 1311 aa17.47■□□□□ 0.39
COPB1-206ENST00000529210 MARF1Q9Y4F3 1742 aaKnown RBP17.47■□□□□ 0.39
COPB1-206ENST00000529210 SBNO1A3KN83 1393 aa17.47■□□□□ 0.39
COPB1-206ENST00000529210 WASLO00401 505 aaPredicted RBP17.46■□□□□ 0.39
COPB1-206ENST00000529210 KRT28Q7Z3Y7 464 aa17.45■□□□□ 0.38
COPB1-206ENST00000529210 FNBP4Q8N3X1 1017 aaPredicted RBP17.45■□□□□ 0.38
COPB1-206ENST00000529210 TNS3Q68CZ2 1445 aa17.45■□□□□ 0.38
COPB1-206ENST00000529210 PSME1Q06323 249 aa17.44■□□□□ 0.38
COPB1-206ENST00000529210 L3MBTL2Q969R5 705 aa17.44■□□□□ 0.38
COPB1-206ENST00000529210 C8orf37Q96NL8 207 aa17.44■□□□□ 0.38
COPB1-206ENST00000529210 MINK1Q8N4C8 1332 aaPredicted RBP17.44■□□□□ 0.38
COPB1-206ENST00000529210 PRR36Q9H6K5 1346 aa17.44■□□□□ 0.38
COPB1-206ENST00000529210 ITSN1Q15811 1721 aa17.44■□□□□ 0.38
COPB1-206ENST00000529210 XPCQ01831 940 aaPredicted RBP17.43■□□□□ 0.38
COPB1-206ENST00000529210 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
COPB1-206ENST00000529210 ATP7BP35670 1465 aa17.43■□□□□ 0.38
COPB1-206ENST00000529210 RXRBP28702 533 aa17.42■□□□□ 0.38
COPB1-206ENST00000529210 NBPF1Q3BBV0 1214 aa17.42■□□□□ 0.38
COPB1-206ENST00000529210 HIRIP3Q9BW71 556 aaPredicted RBP17.42■□□□□ 0.38
COPB1-206ENST00000529210 TRPM1Q7Z4N2 1603 aa17.41■□□□□ 0.38
COPB1-206ENST00000529210 ADAMTS2O95450 1211 aa17.41■□□□□ 0.38
COPB1-206ENST00000529210 SIN3AQ96ST3 1273 aa17.41■□□□□ 0.38
COPB1-206ENST00000529210 ARHGEF10O15013 1369 aa17.4■□□□□ 0.38
COPB1-206ENST00000529210 ALS2Q96Q42 1657 aa17.4■□□□□ 0.38
COPB1-206ENST00000529210 TRIM26Q12899 539 aaPredicted RBP17.4■□□□□ 0.38
COPB1-206ENST00000529210 NGLY1Q96IV0 654 aa17.4■□□□□ 0.38
COPB1-206ENST00000529210 TOPAZ1Q8N9V7 1692 aa17.39■□□□□ 0.37
COPB1-206ENST00000529210 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.39■□□□□ 0.37
COPB1-206ENST00000529210 RBM6P78332 1123 aaKnown RBP17.39■□□□□ 0.37
COPB1-206ENST00000529210 QTRT2Q9H974 415 aaKnown RBP17.39■□□□□ 0.37
COPB1-206ENST00000529210 ATRNO75882 1429 aa17.38■□□□□ 0.37
COPB1-206ENST00000529210 ABCA3Q99758 1704 aa17.38■□□□□ 0.37
COPB1-206ENST00000529210 BCL9LQ86UU0 1499 aa17.37■□□□□ 0.37
COPB1-206ENST00000529210 SLIT2O94813 1529 aa17.37■□□□□ 0.37
COPB1-206ENST00000529210 PMFBP1Q8TBY8 1022 aa17.37■□□□□ 0.37
COPB1-206ENST00000529210 GPRASP1Q5JY77 1395 aa17.37■□□□□ 0.37
COPB1-206ENST00000529210 NUDT16Q96DE0 195 aaKnown RBP17.36■□□□□ 0.37
COPB1-206ENST00000529210 USP21Q9UK80 565 aa17.36■□□□□ 0.37
COPB1-206ENST00000529210 TRPC5Q9UL62 973 aaPredicted RBP17.36■□□□□ 0.37
COPB1-206ENST00000529210 CENPJQ9HC77 1338 aaPredicted RBP17.36■□□□□ 0.37
COPB1-206ENST00000529210 CDK19Q9BWU1 502 aa17.35■□□□□ 0.37
COPB1-206ENST00000529210 POLR3AO14802 1390 aaPredicted RBP17.35■□□□□ 0.37
COPB1-206ENST00000529210 RGS12O14924 1447 aa17.34■□□□□ 0.37
COPB1-206ENST00000529210 QRICH2Q9H0J4 1663 aa17.34■□□□□ 0.37
COPB1-206ENST00000529210 CCDC61Q9Y6R9 512 aa17.34■□□□□ 0.37
COPB1-206ENST00000529210 NWD2Q9ULI1 1742 aa17.33■□□□□ 0.37
COPB1-206ENST00000529210 CRYBG1Q9Y4K1 1723 aa17.33■□□□□ 0.37
COPB1-206ENST00000529210 PLEKHG3A1L390 1219 aa17.33■□□□□ 0.36
COPB1-206ENST00000529210 NEUROD1Q13562 356 aa17.33■□□□□ 0.36
COPB1-206ENST00000529210 NGDNQ8NEJ9 315 aaKnown RBP17.31■□□□□ 0.36
COPB1-206ENST00000529210 ROCK2O75116 1388 aaKnown RBP17.3■□□□□ 0.36
COPB1-206ENST00000529210 PLCH1Q4KWH8 1693 aa17.29■□□□□ 0.36
COPB1-206ENST00000529210 UNC5CLQ8IV45 518 aa17.29■□□□□ 0.36
COPB1-206ENST00000529210 BRD4O60885 1362 aaPredicted RBP17.28■□□□□ 0.36
COPB1-206ENST00000529210 NBPF8Q3BBV2 869 aa17.28■□□□□ 0.36
COPB1-206ENST00000529210 PIAS4Q8N2W9 510 aaPredicted RBP17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.7 ms