RNA–Protein interactions for RNA: ENST00000528739.5

CAPN1-216, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 341 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-216ENST00000528739 PRAM1Q96QH2 718 aa20.68■□□□□ 0.9
CAPN1-216ENST00000528739 C1orf167Q5SNV9 1468 aa20.68■□□□□ 0.9
CAPN1-216ENST00000528739 NRXN1Q9ULB1 1477 aa20.68■□□□□ 0.9
CAPN1-216ENST00000528739 NUTM2BA6NNL0 878 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-216ENST00000528739 NUTM2EB1AL46 878 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-216ENST00000528739 NUTM2AQ8IVF1 878 aaPredicted RBP20.67■□□□□ 0.9
CAPN1-216ENST00000528739 PRAG1Q86YV5 1406 aa20.67■□□□□ 0.9
CAPN1-216ENST00000528739 ASXL1Q8IXJ9 1541 aa20.67■□□□□ 0.9
CAPN1-216ENST00000528739 LRRC59Q96AG4 307 aaKnown RBP20.66■□□□□ 0.9
CAPN1-216ENST00000528739 TECPR2O15040 1411 aa20.65■□□□□ 0.9
CAPN1-216ENST00000528739 SIRT1Q96EB6 747 aa20.65■□□□□ 0.9
CAPN1-216ENST00000528739 SIN3AQ96ST3 1273 aa20.65■□□□□ 0.9
CAPN1-216ENST00000528739 AHDC1Q5TGY3 1603 aaPredicted RBP20.63■□□□□ 0.89
CAPN1-216ENST00000528739 SPATA31A6Q5VVP1 1343 aa20.62■□□□□ 0.89
CAPN1-216ENST00000528739 LAMC1P11047 1609 aa20.62■□□□□ 0.89
CAPN1-216ENST00000528739 COL16A1Q07092 1604 aaPredicted RBP20.61■□□□□ 0.89
CAPN1-216ENST00000528739 HIRIP3Q9BW71 556 aaPredicted RBP20.6■□□□□ 0.89
CAPN1-216ENST00000528739 FOXO3O43524 673 aa20.59■□□□□ 0.89
CAPN1-216ENST00000528739 MINK1Q8N4C8 1332 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-216ENST00000528739 XPCQ01831 940 aaPredicted RBP20.58■□□□□ 0.89
CAPN1-216ENST00000528739 KNDC1Q76NI1 1749 aa20.58■□□□□ 0.88
CAPN1-216ENST00000528739 L3MBTL2Q969R5 705 aa20.57■□□□□ 0.88
CAPN1-216ENST00000528739 NPHP3Q7Z494 1330 aa20.56■□□□□ 0.88
CAPN1-216ENST00000528739 CDC42BPGQ6DT37 1551 aa20.56■□□□□ 0.88
CAPN1-216ENST00000528739 SOCS7O14512 581 aa20.56■□□□□ 0.88
CAPN1-216ENST00000528739 RGS17Q9UGC6 210 aaPredicted RBP20.56■□□□□ 0.88
CAPN1-216ENST00000528739 SOS2Q07890 1332 aaPredicted RBP20.53■□□□□ 0.88
CAPN1-216ENST00000528739 NBPF1Q3BBV0 1214 aa20.53■□□□□ 0.88
CAPN1-216ENST00000528739 ADGRB1O14514 1584 aa20.53■□□□□ 0.88
CAPN1-216ENST00000528739 PHF8Q9UPP1 1060 aa20.52■□□□□ 0.88
CAPN1-216ENST00000528739 NHSL1Q5SYE7 1610 aa20.52■□□□□ 0.88
CAPN1-216ENST00000528739 DLC1Q96QB1 1528 aa20.52■□□□□ 0.87
CAPN1-216ENST00000528739 ADAMTS2O95450 1211 aa20.51■□□□□ 0.87
CAPN1-216ENST00000528739 POTEAQ6S8J7 498 aa20.51■□□□□ 0.87
CAPN1-216ENST00000528739 PNPLA6Q8IY17 1366 aa20.5■□□□□ 0.87
CAPN1-216ENST00000528739 PLEKHG5O94827 1062 aa20.5■□□□□ 0.87
CAPN1-216ENST00000528739 KRT28Q7Z3Y7 464 aa20.5■□□□□ 0.87
CAPN1-216ENST00000528739 PMFBP1Q8TBY8 1022 aa20.5■□□□□ 0.87
CAPN1-216ENST00000528739 C8orf37Q96NL8 207 aa20.5■□□□□ 0.87
CAPN1-216ENST00000528739 LRP6O75581 1613 aa20.49■□□□□ 0.87
CAPN1-216ENST00000528739 PSME1Q06323 249 aa20.49■□□□□ 0.87
CAPN1-216ENST00000528739 LMOD2Q6P5Q4 547 aa20.49■□□□□ 0.87
CAPN1-216ENST00000528739 SHPRHQ149N8 1683 aa20.48■□□□□ 0.87
CAPN1-216ENST00000528739 WASLO00401 505 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-216ENST00000528739 ZNF772Q68DY9 489 aaPredicted RBP20.48■□□□□ 0.87
CAPN1-216ENST00000528739 NGLY1Q96IV0 654 aa20.46■□□□□ 0.87
CAPN1-216ENST00000528739 FMN2Q9NZ56 1722 aa20.45■□□□□ 0.86
CAPN1-216ENST00000528739 HAP1P54257 671 aaPredicted RBP20.45■□□□□ 0.86
CAPN1-216ENST00000528739 EIF3AQ14152 1382 aaKnown RBP20.45■□□□□ 0.86
CAPN1-216ENST00000528739 AFF2P51816 1311 aa20.44■□□□□ 0.86
CAPN1-216ENST00000528739 TONSLQ96HA7 1378 aa20.44■□□□□ 0.86
CAPN1-216ENST00000528739 NGDNQ8NEJ9 315 aaKnown RBP20.43■□□□□ 0.86
CAPN1-216ENST00000528739 CDK19Q9BWU1 502 aa20.43■□□□□ 0.86
CAPN1-216ENST00000528739 PCGF6Q9BYE7 350 aa20.41■□□□□ 0.86
CAPN1-216ENST00000528739 ROCK2O75116 1388 aaKnown RBP20.41■□□□□ 0.86
CAPN1-216ENST00000528739 ANKARQ7Z5J8 1434 aa20.41■□□□□ 0.86
CAPN1-216ENST00000528739 SRPK2P78362 688 aaKnown RBP20.4■□□□□ 0.86
CAPN1-216ENST00000528739 SPATA31A3Q5VYP0 1347 aa20.4■□□□□ 0.86
CAPN1-216ENST00000528739 PXDNQ92626 1479 aa20.4■□□□□ 0.86
CAPN1-216ENST00000528739 NUDT16Q96DE0 195 aaKnown RBP20.4■□□□□ 0.86
CAPN1-216ENST00000528739 CENPJQ9HC77 1338 aaPredicted RBP20.4■□□□□ 0.86
CAPN1-216ENST00000528739 GPRASP1Q5JY77 1395 aa20.39■□□□□ 0.85
CAPN1-216ENST00000528739 PRR36Q9H6K5 1346 aa20.39■□□□□ 0.85
CAPN1-216ENST00000528739 PAK3O75914 559 aaPredicted RBP20.39■□□□□ 0.85
CAPN1-216ENST00000528739 KIF1AQ12756 1690 aa20.38■□□□□ 0.85
CAPN1-216ENST00000528739 RXRBP28702 533 aa20.38■□□□□ 0.85
CAPN1-216ENST00000528739 KIAA1210Q9ULL0 1709 aa20.38■□□□□ 0.85
CAPN1-216ENST00000528739 QTRT2Q9H974 415 aaKnown RBP20.37■□□□□ 0.85
CAPN1-216ENST00000528739 ADGRB2O60241 1585 aa20.37■□□□□ 0.85
CAPN1-216ENST00000528739 ARHGEF28Q8N1W1 1705 aaKnown RBP20.36■□□□□ 0.85
CAPN1-216ENST00000528739 NBPF8Q3BBV2 869 aa20.36■□□□□ 0.85
CAPN1-216ENST00000528739 USP21Q9UK80 565 aa20.36■□□□□ 0.85
CAPN1-216ENST00000528739 TULP4Q9NRJ4 1543 aa20.36■□□□□ 0.85
CAPN1-216ENST00000528739 RGPD8O14715 1765 aaPredicted RBP20.36■□□□□ 0.85
CAPN1-216ENST00000528739 CABLES1Q8TDN4 633 aa20.35■□□□□ 0.85
CAPN1-216ENST00000528739 CARD11Q9BXL7 1154 aa20.34■□□□□ 0.85
CAPN1-216ENST00000528739 CABP2Q9NPB3 220 aa20.34■□□□□ 0.85
CAPN1-216ENST00000528739 CCDC61Q9Y6R9 512 aa20.33■□□□□ 0.85
CAPN1-216ENST00000528739 TNS3Q68CZ2 1445 aa20.33■□□□□ 0.84
CAPN1-216ENST00000528739 SBNO1A3KN83 1393 aa20.33■□□□□ 0.84
CAPN1-216ENST00000528739 ARHGEF10O15013 1369 aa20.31■□□□□ 0.84
CAPN1-216ENST00000528739 USP32Q8NFA0 1604 aa20.31■□□□□ 0.84
CAPN1-216ENST00000528739 RBM6P78332 1123 aaKnown RBP20.29■□□□□ 0.84
CAPN1-216ENST00000528739 TRPC5Q9UL62 973 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-216ENST00000528739 ACEP12821 1306 aa20.28■□□□□ 0.84
CAPN1-216ENST00000528739 EVC2Q86UK5 1308 aa20.28■□□□□ 0.84
CAPN1-216ENST00000528739 TRPM1Q7Z4N2 1603 aa20.27■□□□□ 0.84
CAPN1-216ENST00000528739 ATP7BP35670 1465 aa20.27■□□□□ 0.84
CAPN1-216ENST00000528739 FNBP4Q8N3X1 1017 aaPredicted RBP20.27■□□□□ 0.84
CAPN1-216ENST00000528739 COL22A1Q8NFW1 1626 aaPredicted RBP20.27■□□□□ 0.83
CAPN1-216ENST00000528739 NUTM2GQ5VZR2 741 aa20.25■□□□□ 0.83
CAPN1-216ENST00000528739 PLEKHG3A1L390 1219 aa20.24■□□□□ 0.83
CAPN1-216ENST00000528739 CABP1Q9NZU7 370 aa20.24■□□□□ 0.83
CAPN1-216ENST00000528739 CCDC9Q9Y3X0 531 aaKnown RBP20.24■□□□□ 0.83
CAPN1-216ENST00000528739 PPIP5K1Q6PFW1 1433 aa20.23■□□□□ 0.83
CAPN1-216ENST00000528739 CCER1Q8TC90 406 aaPredicted RBP20.22■□□□□ 0.83
CAPN1-216ENST00000528739 QRICH2Q9H0J4 1663 aa20.22■□□□□ 0.83
CAPN1-216ENST00000528739 UNC5CLQ8IV45 518 aa20.21■□□□□ 0.83
CAPN1-216ENST00000528739 ABTB2Q8N961 1025 aa20.21■□□□□ 0.83
CAPN1-216ENST00000528739 ITSN1Q15811 1721 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms