RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 DLC1Q96QB1 1528 aa24.29■■□□□ 1.48
HIF3A-211ENST00000528563 NBPF1Q3BBV0 1214 aa24.27■■□□□ 1.48
HIF3A-211ENST00000528563 POGKQ9P215 609 aa24.27■■□□□ 1.48
HIF3A-211ENST00000528563 ORAI2Q96SN7 254 aa24.26■■□□□ 1.47
HIF3A-211ENST00000528563 CDC42BPGQ6DT37 1551 aa24.25■■□□□ 1.47
HIF3A-211ENST00000528563 SAFB2Q14151 953 aaKnown RBP eCLIP24.25■■□□□ 1.47
HIF3A-211ENST00000528563 PHLPP1O60346 1717 aa24.24■■□□□ 1.47
HIF3A-211ENST00000528563 KIAA1210Q9ULL0 1709 aa24.24■■□□□ 1.47
HIF3A-211ENST00000528563 AHDC1Q5TGY3 1603 aaPredicted RBP24.24■■□□□ 1.47
HIF3A-211ENST00000528563 DISP3Q9P2K9 1392 aa24.21■■□□□ 1.47
HIF3A-211ENST00000528563 COL16A1Q07092 1604 aaPredicted RBP24.21■■□□□ 1.47
HIF3A-211ENST00000528563 DDX17Q92841 729 aaKnown RBP24.2■■□□□ 1.47
HIF3A-211ENST00000528563 NUTM2FA1L443 756 aa24.19■■□□□ 1.46
HIF3A-211ENST00000528563 ESCO1Q5FWF5 840 aa24.19■■□□□ 1.46
HIF3A-211ENST00000528563 JCADQ9P266 1359 aa24.18■■□□□ 1.46
HIF3A-211ENST00000528563 NBPF8Q3BBV2 869 aa24.16■■□□□ 1.46
HIF3A-211ENST00000528563 NHSL1Q5SYE7 1610 aa24.16■■□□□ 1.46
HIF3A-211ENST00000528563 MED1Q15648 1581 aaPredicted RBP24.16■■□□□ 1.46
HIF3A-211ENST00000528563 MINK1Q8N4C8 1332 aaPredicted RBP24.16■■□□□ 1.46
HIF3A-211ENST00000528563 LRRC59Q96AG4 307 aaKnown RBP24.15■■□□□ 1.46
HIF3A-211ENST00000528563 HIRIP3Q9BW71 556 aaPredicted RBP24.15■■□□□ 1.46
HIF3A-211ENST00000528563 FMN2Q9NZ56 1722 aa24.15■■□□□ 1.46
HIF3A-211ENST00000528563 TONSLQ96HA7 1378 aa24.15■■□□□ 1.46
HIF3A-211ENST00000528563 SOS2Q07890 1332 aaPredicted RBP24.14■■□□□ 1.45
HIF3A-211ENST00000528563 ARHGEF28Q8N1W1 1705 aaKnown RBP24.13■■□□□ 1.45
HIF3A-211ENST00000528563 WASLO00401 505 aaPredicted RBP24.12■■□□□ 1.45
HIF3A-211ENST00000528563 FOXO3O43524 673 aa24.12■■□□□ 1.45
HIF3A-211ENST00000528563 ADGRB2O60241 1585 aa24.11■■□□□ 1.45
HIF3A-211ENST00000528563 TRPM1Q7Z4N2 1603 aa24.1■■□□□ 1.45
HIF3A-211ENST00000528563 SPATA31A6Q5VVP1 1343 aa24.09■■□□□ 1.45
HIF3A-211ENST00000528563 NPHP3Q7Z494 1330 aa24.09■■□□□ 1.45
HIF3A-211ENST00000528563 CLSPNQ9HAW4 1339 aa24.09■■□□□ 1.45
HIF3A-211ENST00000528563 PHF8Q9UPP1 1060 aa24.07■■□□□ 1.44
HIF3A-211ENST00000528563 ANKARQ7Z5J8 1434 aa24.07■■□□□ 1.44
HIF3A-211ENST00000528563 ROCK2O75116 1388 aaKnown RBP24.06■■□□□ 1.44
HIF3A-211ENST00000528563 RGPD8O14715 1765 aaPredicted RBP24.06■■□□□ 1.44
HIF3A-211ENST00000528563 PRR36Q9H6K5 1346 aa24.06■■□□□ 1.44
HIF3A-211ENST00000528563 CENPJQ9HC77 1338 aaPredicted RBP24.06■■□□□ 1.44
HIF3A-211ENST00000528563 SHPRHQ149N8 1683 aa24.05■■□□□ 1.44
HIF3A-211ENST00000528563 GPRASP1Q5JY77 1395 aa24.05■■□□□ 1.44
HIF3A-211ENST00000528563 CDK19Q9BWU1 502 aa24.04■■□□□ 1.44
HIF3A-211ENST00000528563 EIF3AQ14152 1382 aaKnown RBP24.04■■□□□ 1.44
HIF3A-211ENST00000528563 USP32Q8NFA0 1604 aa24.04■■□□□ 1.44
HIF3A-211ENST00000528563 XPCQ01831 940 aaPredicted RBP24.03■■□□□ 1.44
HIF3A-211ENST00000528563 PNPLA6Q8IY17 1366 aa24.03■■□□□ 1.44
HIF3A-211ENST00000528563 PXDNQ92626 1479 aa24.03■■□□□ 1.44
HIF3A-211ENST00000528563 PHF23Q9BUL5 403 aaPredicted RBP24.02■■□□□ 1.44
HIF3A-211ENST00000528563 ILDR2Q71H61 639 aa24.01■■□□□ 1.43
HIF3A-211ENST00000528563 RGS17Q9UGC6 210 aaPredicted RBP24.01■■□□□ 1.43
HIF3A-211ENST00000528563 TULP4Q9NRJ4 1543 aa24.01■■□□□ 1.43
HIF3A-211ENST00000528563 KRT28Q7Z3Y7 464 aa24■■□□□ 1.43
HIF3A-211ENST00000528563 NUDT16Q96DE0 195 aaKnown RBP24■■□□□ 1.43
HIF3A-211ENST00000528563 TIMELESSQ9UNS1 1208 aa24■■□□□ 1.43
HIF3A-211ENST00000528563 KIF1AQ12756 1690 aa24■■□□□ 1.43
HIF3A-211ENST00000528563 PMFBP1Q8TBY8 1022 aa24■■□□□ 1.43
HIF3A-211ENST00000528563 LRP6O75581 1613 aa23.99■■□□□ 1.43
HIF3A-211ENST00000528563 NUTM2BA6NNL0 878 aaPredicted RBP23.98■■□□□ 1.43
HIF3A-211ENST00000528563 NUTM2EB1AL46 878 aaPredicted RBP23.98■■□□□ 1.43
HIF3A-211ENST00000528563 NUTM2AQ8IVF1 878 aaPredicted RBP23.98■■□□□ 1.43
HIF3A-211ENST00000528563 CARD11Q9BXL7 1154 aa23.98■■□□□ 1.43
HIF3A-211ENST00000528563 RALGAPBQ86X10 1494 aa23.97■■□□□ 1.43
HIF3A-211ENST00000528563 PSME1Q06323 249 aa23.97■■□□□ 1.43
HIF3A-211ENST00000528563 CCER1Q8TC90 406 aaPredicted RBP23.96■■□□□ 1.43
HIF3A-211ENST00000528563 SPATA31A3Q5VYP0 1347 aa23.96■■□□□ 1.43
HIF3A-211ENST00000528563 ATP7BP35670 1465 aa23.95■■□□□ 1.42
HIF3A-211ENST00000528563 CCDC61Q9Y6R9 512 aa23.94■■□□□ 1.42
HIF3A-211ENST00000528563 QRICH2Q9H0J4 1663 aa23.92■■□□□ 1.42
HIF3A-211ENST00000528563 MEX3CQ5U5Q3 659 aaKnown RBP23.92■■□□□ 1.42
HIF3A-211ENST00000528563 SBNO1A3KN83 1393 aa23.91■■□□□ 1.42
HIF3A-211ENST00000528563 PLEKHG3A1L390 1219 aa23.91■■□□□ 1.42
HIF3A-211ENST00000528563 SRPK2P78362 688 aaKnown RBP23.91■■□□□ 1.42
HIF3A-211ENST00000528563 NGDNQ8NEJ9 315 aaKnown RBP23.91■■□□□ 1.42
HIF3A-211ENST00000528563 CABP2Q9NPB3 220 aa23.91■■□□□ 1.42
HIF3A-211ENST00000528563 EVC2Q86UK5 1308 aa23.9■■□□□ 1.42
HIF3A-211ENST00000528563 COL22A1Q8NFW1 1626 aaPredicted RBP23.89■■□□□ 1.42
HIF3A-211ENST00000528563 POTEAQ6S8J7 498 aa23.87■■□□□ 1.41
HIF3A-211ENST00000528563 POLR3AO14802 1390 aaPredicted RBP23.86■■□□□ 1.41
HIF3A-211ENST00000528563 SBNO2Q9Y2G9 1366 aa23.86■■□□□ 1.41
HIF3A-211ENST00000528563 TNS3Q68CZ2 1445 aa23.86■■□□□ 1.41
HIF3A-211ENST00000528563 ADAMTS2O95450 1211 aa23.86■■□□□ 1.41
HIF3A-211ENST00000528563 ITSN1Q15811 1721 aa23.86■■□□□ 1.41
HIF3A-211ENST00000528563 ACEP12821 1306 aa23.86■■□□□ 1.41
HIF3A-211ENST00000528563 TOPAZ1Q8N9V7 1692 aa23.83■■□□□ 1.41
HIF3A-211ENST00000528563 ARHGEF10O15013 1369 aa23.83■■□□□ 1.41
HIF3A-211ENST00000528563 ZNF772Q68DY9 489 aaPredicted RBP23.82■■□□□ 1.4
HIF3A-211ENST00000528563 LMOD2Q6P5Q4 547 aa23.82■■□□□ 1.4
HIF3A-211ENST00000528563 C8orf37Q96NL8 207 aa23.82■■□□□ 1.4
HIF3A-211ENST00000528563 CABP1Q9NZU7 370 aa23.82■■□□□ 1.4
HIF3A-211ENST00000528563 TRPM3Q9HCF6 1732 aaPredicted RBP23.82■■□□□ 1.4
HIF3A-211ENST00000528563 NGLY1Q96IV0 654 aa23.81■■□□□ 1.4
HIF3A-211ENST00000528563 AFF2P51816 1311 aa23.81■■□□□ 1.4
HIF3A-211ENST00000528563 PPIP5K1Q6PFW1 1433 aa23.81■■□□□ 1.4
HIF3A-211ENST00000528563 ST20-MTHFSA0A0A6YYL1 179 aa23.8■■□□□ 1.4
HIF3A-211ENST00000528563 CABLES1Q8TDN4 633 aa23.8■■□□□ 1.4
HIF3A-211ENST00000528563 PAK3O75914 559 aaPredicted RBP23.79■■□□□ 1.4
HIF3A-211ENST00000528563 TESK2Q96S53 571 aa23.79■■□□□ 1.4
HIF3A-211ENST00000528563 FNBP4Q8N3X1 1017 aaPredicted RBP23.77■■□□□ 1.4
HIF3A-211ENST00000528563 ALS2Q96Q42 1657 aa23.76■■□□□ 1.39
HIF3A-211ENST00000528563 PUS7Q96PZ0 661 aaKnown RBP23.75■■□□□ 1.39
HIF3A-211ENST00000528563 ATAD2Q6PL18 1390 aa23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms