RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	LAMC1	P11047	1609 aa		17.14	■□□□□ 0.33
PSMC3-205	ENST00000528362	DDX17	Q92841	729 aa	Known RBP	17.13	■□□□□ 0.33
PSMC3-205	ENST00000528362	ORAI2	Q96SN7	254 aa		17.13	■□□□□ 0.33
PSMC3-205	ENST00000528362	CDC42BPG	Q6DT37	1551 aa		17.13	■□□□□ 0.33
PSMC3-205	ENST00000528362	KNDC1	Q76NI1	1749 aa		17.12	■□□□□ 0.33
PSMC3-205	ENST00000528362	PRAM1	Q96QH2	718 aa		17.11	■□□□□ 0.33
PSMC3-205	ENST00000528362	TRIM26	Q12899	539 aa	Predicted RBP	17.09	■□□□□ 0.33
PSMC3-205	ENST00000528362	RGS17	Q9UGC6	210 aa	Predicted RBP	17.09	■□□□□ 0.33
PSMC3-205	ENST00000528362	DLC1	Q96QB1	1528 aa		17.09	■□□□□ 0.33
PSMC3-205	ENST00000528362	SPATA31A6	Q5VVP1	1343 aa		17.08	■□□□□ 0.32
PSMC3-205	ENST00000528362	TRAK1	Q9UPV9	953 aa		17.08	■□□□□ 0.32
PSMC3-205	ENST00000528362	NUTM2F	A1L443	756 aa		17.07	■□□□□ 0.32
PSMC3-205	ENST00000528362	SAFB2	Q14151	953 aa	Known RBP eCLIP	17.07	■□□□□ 0.32
PSMC3-205	ENST00000528362	LRP6	O75581	1613 aa		17.07	■□□□□ 0.32
PSMC3-205	ENST00000528362	NHSL1	Q5SYE7	1610 aa		17.07	■□□□□ 0.32
PSMC3-205	ENST00000528362	ESCO1	Q5FWF5	840 aa		17.06	■□□□□ 0.32
PSMC3-205	ENST00000528362	LRRC59	Q96AG4	307 aa	Known RBP	17.06	■□□□□ 0.32
PSMC3-205	ENST00000528362	SIN3A	Q96ST3	1273 aa		17.06	■□□□□ 0.32
PSMC3-205	ENST00000528362	SOS2	Q07890	1332 aa	Predicted RBP	17.05	■□□□□ 0.32
PSMC3-205	ENST00000528362	POGK	Q9P215	609 aa		17.05	■□□□□ 0.32
PSMC3-205	ENST00000528362	PNPLA6	Q8IY17	1366 aa		17.04	■□□□□ 0.32
PSMC3-205	ENST00000528362	L3MBTL2	Q969R5	705 aa		17.03	■□□□□ 0.32
PSMC3-205	ENST00000528362	NPHP3	Q7Z494	1330 aa		17.02	■□□□□ 0.32
PSMC3-205	ENST00000528362	SHPRH	Q149N8	1683 aa		17.02	■□□□□ 0.32
PSMC3-205	ENST00000528362	FOXO3	O43524	673 aa		17.01	■□□□□ 0.31
PSMC3-205	ENST00000528362	NUTM2B	A6NNL0	878 aa	Predicted RBP	17	■□□□□ 0.31
PSMC3-205	ENST00000528362	NUTM2E	B1AL46	878 aa	Predicted RBP	17	■□□□□ 0.31
PSMC3-205	ENST00000528362	NEUROD1	Q13562	356 aa		17	■□□□□ 0.31
PSMC3-205	ENST00000528362	NBPF1	Q3BBV0	1214 aa		17	■□□□□ 0.31
PSMC3-205	ENST00000528362	POTEA	Q6S8J7	498 aa		17	■□□□□ 0.31
PSMC3-205	ENST00000528362	NUTM2A	Q8IVF1	878 aa	Predicted RBP	17	■□□□□ 0.31
PSMC3-205	ENST00000528362	HIRIP3	Q9BW71	556 aa	Predicted RBP	17	■□□□□ 0.31
PSMC3-205	ENST00000528362	PXDN	Q92626	1479 aa		16.99	■□□□□ 0.31
PSMC3-205	ENST00000528362	MINK1	Q8N4C8	1332 aa	Predicted RBP	16.99	■□□□□ 0.31
PSMC3-205	ENST00000528362	FMN2	Q9NZ56	1722 aa		16.99	■□□□□ 0.31
PSMC3-205	ENST00000528362	ADGRB2	O60241	1585 aa		16.99	■□□□□ 0.31
PSMC3-205	ENST00000528362	XPC	Q01831	940 aa	Predicted RBP	16.99	■□□□□ 0.31
PSMC3-205	ENST00000528362	MEX3C	Q5U5Q3	659 aa	Known RBP	16.99	■□□□□ 0.31
PSMC3-205	ENST00000528362	ANKAR	Q7Z5J8	1434 aa		16.97	■□□□□ 0.31
PSMC3-205	ENST00000528362	PHF8	Q9UPP1	1060 aa		16.96	■□□□□ 0.31
PSMC3-205	ENST00000528362	PRR36	Q9H6K5	1346 aa		16.96	■□□□□ 0.3
PSMC3-205	ENST00000528362	WASL	O00401	505 aa	Predicted RBP	16.95	■□□□□ 0.3
PSMC3-205	ENST00000528362	KIAA1210	Q9ULL0	1709 aa		16.93	■□□□□ 0.3
PSMC3-205	ENST00000528362	EIF3A	Q14152	1382 aa	Known RBP	16.93	■□□□□ 0.3
PSMC3-205	ENST00000528362	TULP4	Q9NRJ4	1543 aa		16.92	■□□□□ 0.3
PSMC3-205	ENST00000528362	KRT28	Q7Z3Y7	464 aa		16.92	■□□□□ 0.3
PSMC3-205	ENST00000528362	ARHGEF28	Q8N1W1	1705 aa	Known RBP	16.92	■□□□□ 0.3
PSMC3-205	ENST00000528362	SPATA31A3	Q5VYP0	1347 aa		16.92	■□□□□ 0.3
PSMC3-205	ENST00000528362	KIF1A	Q12756	1690 aa		16.91	■□□□□ 0.3
PSMC3-205	ENST00000528362	ADAMTS2	O95450	1211 aa		16.91	■□□□□ 0.3
PSMC3-205	ENST00000528362	ZNF772	Q68DY9	489 aa	Predicted RBP	16.91	■□□□□ 0.3
PSMC3-205	ENST00000528362	PMFBP1	Q8TBY8	1022 aa		16.91	■□□□□ 0.3
PSMC3-205	ENST00000528362	USP32	Q8NFA0	1604 aa		16.91	■□□□□ 0.3
PSMC3-205	ENST00000528362	AFF2	P51816	1311 aa		16.91	■□□□□ 0.3
PSMC3-205	ENST00000528362	C8orf37	Q96NL8	207 aa		16.9	■□□□□ 0.3
PSMC3-205	ENST00000528362	NBPF8	Q3BBV2	869 aa		16.89	■□□□□ 0.29
PSMC3-205	ENST00000528362	COL22A1	Q8NFW1	1626 aa	Predicted RBP	16.88	■□□□□ 0.29
PSMC3-205	ENST00000528362	ATP7B	P35670	1465 aa		16.88	■□□□□ 0.29
PSMC3-205	ENST00000528362	CENPJ	Q9HC77	1338 aa	Predicted RBP	16.88	■□□□□ 0.29
PSMC3-205	ENST00000528362	SBNO1	A3KN83	1393 aa		16.88	■□□□□ 0.29
PSMC3-205	ENST00000528362	ROCK2	O75116	1388 aa	Known RBP	16.88	■□□□□ 0.29
PSMC3-205	ENST00000528362	TNS3	Q68CZ2	1445 aa		16.87	■□□□□ 0.29
PSMC3-205	ENST00000528362	PSME1	Q06323	249 aa		16.87	■□□□□ 0.29
PSMC3-205	ENST00000528362	NUDT16	Q96DE0	195 aa	Known RBP	16.87	■□□□□ 0.29
PSMC3-205	ENST00000528362	CDK19	Q9BWU1	502 aa		16.87	■□□□□ 0.29
PSMC3-205	ENST00000528362	TONSL	Q96HA7	1378 aa		16.86	■□□□□ 0.29
PSMC3-205	ENST00000528362	NGLY1	Q96IV0	654 aa		16.85	■□□□□ 0.29
PSMC3-205	ENST00000528362	GPRASP1	Q5JY77	1395 aa		16.85	■□□□□ 0.29
PSMC3-205	ENST00000528362	TRPM1	Q7Z4N2	1603 aa		16.85	■□□□□ 0.29
PSMC3-205	ENST00000528362	ARHGEF10	O15013	1369 aa		16.83	■□□□□ 0.28
PSMC3-205	ENST00000528362	RGPD8	O14715	1765 aa	Predicted RBP	16.82	■□□□□ 0.28
PSMC3-205	ENST00000528362	FNBP4	Q8N3X1	1017 aa	Predicted RBP	16.82	■□□□□ 0.28
PSMC3-205	ENST00000528362	NGDN	Q8NEJ9	315 aa	Known RBP	16.82	■□□□□ 0.28
PSMC3-205	ENST00000528362	CCDC61	Q9Y6R9	512 aa		16.82	■□□□□ 0.28
PSMC3-205	ENST00000528362	RXRB	P28702	533 aa		16.81	■□□□□ 0.28
PSMC3-205	ENST00000528362	LMOD2	Q6P5Q4	547 aa		16.81	■□□□□ 0.28
PSMC3-205	ENST00000528362	CABLES1	Q8TDN4	633 aa		16.81	■□□□□ 0.28
PSMC3-205	ENST00000528362	SRPK2	P78362	688 aa	Known RBP	16.8	■□□□□ 0.28
PSMC3-205	ENST00000528362	QTRT2	Q9H974	415 aa	Known RBP	16.8	■□□□□ 0.28
PSMC3-205	ENST00000528362	RALGAPB	Q86X10	1494 aa		16.8	■□□□□ 0.28
PSMC3-205	ENST00000528362	POLR3A	O14802	1390 aa	Predicted RBP	16.79	■□□□□ 0.28
PSMC3-205	ENST00000528362	PLEKHG3	A1L390	1219 aa		16.79	■□□□□ 0.28
PSMC3-205	ENST00000528362	PCGF6	Q9BYE7	350 aa		16.79	■□□□□ 0.28
PSMC3-205	ENST00000528362	CABP2	Q9NPB3	220 aa		16.79	■□□□□ 0.28
PSMC3-205	ENST00000528362	USP21	Q9UK80	565 aa		16.79	■□□□□ 0.28
PSMC3-205	ENST00000528362	ACE	P12821	1306 aa		16.78	■□□□□ 0.28
PSMC3-205	ENST00000528362	PLEKHG5	O94827	1062 aa		16.78	■□□□□ 0.28
PSMC3-205	ENST00000528362	TRPM3	Q9HCF6	1732 aa	Predicted RBP	16.77	■□□□□ 0.28
PSMC3-205	ENST00000528362	CARD11	Q9BXL7	1154 aa		16.77	■□□□□ 0.28
PSMC3-205	ENST00000528362	BCL9L	Q86UU0	1499 aa		16.77	■□□□□ 0.28
PSMC3-205	ENST00000528362	CDK12	Q9NYV4	1490 aa	Predicted RBP	16.77	■□□□□ 0.28
PSMC3-205	ENST00000528362	PAK3	O75914	559 aa	Predicted RBP	16.76	■□□□□ 0.27
PSMC3-205	ENST00000528362	HAP1	P54257	671 aa	Predicted RBP	16.76	■□□□□ 0.27
PSMC3-205	ENST00000528362	RBM6	P78332	1123 aa	Known RBP	16.76	■□□□□ 0.27
PSMC3-205	ENST00000528362	ATRN	O75882	1429 aa		16.76	■□□□□ 0.27
PSMC3-205	ENST00000528362	PPIP5K1	Q6PFW1	1433 aa		16.76	■□□□□ 0.27
PSMC3-205	ENST00000528362	TOPAZ1	Q8N9V7	1692 aa		16.75	■□□□□ 0.27
PSMC3-205	ENST00000528362	QRICH2	Q9H0J4	1663 aa		16.75	■□□□□ 0.27
PSMC3-205	ENST00000528362	EVC2	Q86UK5	1308 aa		16.75	■□□□□ 0.27
PSMC3-205	ENST00000528362	TRPC5	Q9UL62	973 aa	Predicted RBP	16.75	■□□□□ 0.27

Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms