RNA–Protein interactions for RNA: ENST00000528201.1

PACSIN3-204, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 864 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-204ENST00000528201 YTHDC2Q9H6S0 1430 aaKnown RBP35.24■■■■□ 3.23
PACSIN3-204ENST00000528201 SHPRHQ149N8 1683 aa35.21■■■■□ 3.23
PACSIN3-204ENST00000528201 CDC42BPGQ6DT37 1551 aa35.18■■■■□ 3.22
PACSIN3-204ENST00000528201 KNDC1Q76NI1 1749 aa35.16■■■■□ 3.22
PACSIN3-204ENST00000528201 LRRC59Q96AG4 307 aaKnown RBP35.15■■■■□ 3.22
PACSIN3-204ENST00000528201 NUTM2BA6NNL0 878 aaPredicted RBP35.13■■■■□ 3.21
PACSIN3-204ENST00000528201 NUTM2EB1AL46 878 aaPredicted RBP35.13■■■■□ 3.21
PACSIN3-204ENST00000528201 NUTM2AQ8IVF1 878 aaPredicted RBP35.13■■■■□ 3.21
PACSIN3-204ENST00000528201 PNPLA6Q8IY17 1366 aa35.13■■■■□ 3.21
PACSIN3-204ENST00000528201 SOS2Q07890 1332 aaPredicted RBP35.11■■■■□ 3.21
PACSIN3-204ENST00000528201 LAMC1P11047 1609 aa35.11■■■■□ 3.21
PACSIN3-204ENST00000528201 SIRT1Q96EB6 747 aa35.11■■■■□ 3.21
PACSIN3-204ENST00000528201 DHX57Q6P158 1386 aaKnown RBP35.11■■■■□ 3.21
PACSIN3-204ENST00000528201 MEX3CQ5U5Q3 659 aaKnown RBP35.1■■■■□ 3.21
PACSIN3-204ENST00000528201 DCAF11Q8TEB1 546 aa35.1■■■■□ 3.21
PACSIN3-204ENST00000528201 KDM2AQ9Y2K7 1162 aa35.1■■■■□ 3.21
PACSIN3-204ENST00000528201 NUTM2FA1L443 756 aa35.09■■■■□ 3.21
PACSIN3-204ENST00000528201 ESCO1Q5FWF5 840 aa35.08■■■■□ 3.21
PACSIN3-204ENST00000528201 ADGRB1O14514 1584 aa35.07■■■■□ 3.2
PACSIN3-204ENST00000528201 PRAM1Q96QH2 718 aa35.04■■■■□ 3.2
PACSIN3-204ENST00000528201 SAFB2Q14151 953 aaKnown RBP eCLIP35.01■■■■□ 3.2
PACSIN3-204ENST00000528201 FOXO3O43524 673 aa34.99■■■■□ 3.19
PACSIN3-204ENST00000528201 DLC1Q96QB1 1528 aa34.99■■■■□ 3.19
PACSIN3-204ENST00000528201 PXDNQ92626 1479 aa34.98■■■■□ 3.19
PACSIN3-204ENST00000528201 XPCQ01831 940 aaPredicted RBP34.98■■■■□ 3.19
PACSIN3-204ENST00000528201 NPHP3Q7Z494 1330 aa34.98■■■■□ 3.19
PACSIN3-204ENST00000528201 TRAK1Q9UPV9 953 aa34.97■■■■□ 3.19
PACSIN3-204ENST00000528201 FMN2Q9NZ56 1722 aa34.96■■■■□ 3.19
PACSIN3-204ENST00000528201 STAC3Q96MF2 364 aa34.96■■■■□ 3.19
PACSIN3-204ENST00000528201 ZNF772Q68DY9 489 aaPredicted RBP34.95■■■■□ 3.19
PACSIN3-204ENST00000528201 AFF2P51816 1311 aa34.93■■■■□ 3.18
PACSIN3-204ENST00000528201 POGKQ9P215 609 aa34.93■■■■□ 3.18
PACSIN3-204ENST00000528201 C8orf37Q96NL8 207 aa34.91■■■■□ 3.18
PACSIN3-204ENST00000528201 ADAMTS2O95450 1211 aa34.9■■■■□ 3.18
PACSIN3-204ENST00000528201 HIRIP3Q9BW71 556 aaPredicted RBP34.86■■■■□ 3.17
PACSIN3-204ENST00000528201 PHF8Q9UPP1 1060 aa34.83■■■■□ 3.17
PACSIN3-204ENST00000528201 COL22A1Q8NFW1 1626 aaPredicted RBP34.83■■■■□ 3.17
PACSIN3-204ENST00000528201 ADGRB2O60241 1585 aa34.83■■■■□ 3.17
PACSIN3-204ENST00000528201 MINK1Q8N4C8 1332 aaPredicted RBP34.82■■■■□ 3.17
PACSIN3-204ENST00000528201 KIF1AQ12756 1690 aa34.79■■■■□ 3.16
PACSIN3-204ENST00000528201 KRT28Q7Z3Y7 464 aa34.79■■■■□ 3.16
PACSIN3-204ENST00000528201 SPATA31A3Q5VYP0 1347 aa34.79■■■■□ 3.16
PACSIN3-204ENST00000528201 USP32Q8NFA0 1604 aa34.78■■■■□ 3.16
PACSIN3-204ENST00000528201 RXRBP28702 533 aa34.78■■■■□ 3.16
PACSIN3-204ENST00000528201 NGLY1Q96IV0 654 aa34.78■■■■□ 3.16
PACSIN3-204ENST00000528201 ANKARQ7Z5J8 1434 aa34.78■■■■□ 3.16
PACSIN3-204ENST00000528201 PRR36Q9H6K5 1346 aa34.77■■■■□ 3.16
PACSIN3-204ENST00000528201 RGPD8O14715 1765 aaPredicted RBP34.75■■■■□ 3.15
PACSIN3-204ENST00000528201 NBPF1Q3BBV0 1214 aa34.75■■■■□ 3.15
PACSIN3-204ENST00000528201 SIN3AQ96ST3 1273 aa34.74■■■■□ 3.15
PACSIN3-204ENST00000528201 WASLO00401 505 aaPredicted RBP34.73■■■■□ 3.15
PACSIN3-204ENST00000528201 PMFBP1Q8TBY8 1022 aa34.73■■■■□ 3.15
PACSIN3-204ENST00000528201 QTRT2Q9H974 415 aaKnown RBP34.73■■■■□ 3.15
PACSIN3-204ENST00000528201 FNBP4Q8N3X1 1017 aaPredicted RBP34.71■■■■□ 3.15
PACSIN3-204ENST00000528201 ARHGEF28Q8N1W1 1705 aaKnown RBP34.69■■■■□ 3.14
PACSIN3-204ENST00000528201 L3MBTL2Q969R5 705 aa34.69■■■■□ 3.14
PACSIN3-204ENST00000528201 TNS3Q68CZ2 1445 aa34.68■■■■□ 3.14
PACSIN3-204ENST00000528201 TULP4Q9NRJ4 1543 aa34.68■■■■□ 3.14
PACSIN3-204ENST00000528201 CDK12Q9NYV4 1490 aaPredicted RBP34.67■■■■□ 3.14
PACSIN3-204ENST00000528201 USP21Q9UK80 565 aa34.67■■■■□ 3.14
PACSIN3-204ENST00000528201 SBNO1A3KN83 1393 aa34.66■■■■□ 3.14
PACSIN3-204ENST00000528201 KIAA1210Q9ULL0 1709 aa34.65■■■■□ 3.14
PACSIN3-204ENST00000528201 RBM6P78332 1123 aaKnown RBP34.65■■■■□ 3.14
PACSIN3-204ENST00000528201 PSME1Q06323 249 aa34.65■■■■□ 3.14
PACSIN3-204ENST00000528201 EIF3AQ14152 1382 aaKnown RBP34.64■■■■□ 3.14
PACSIN3-204ENST00000528201 RGS12O14924 1447 aa34.64■■■■□ 3.14
PACSIN3-204ENST00000528201 CABLES1Q8TDN4 633 aa34.62■■■■□ 3.13
PACSIN3-204ENST00000528201 BCL9LQ86UU0 1499 aa34.61■■■■□ 3.13
PACSIN3-204ENST00000528201 NEUROD1Q13562 356 aa34.61■■■■□ 3.13
PACSIN3-204ENST00000528201 ATP7BP35670 1465 aa34.59■■■■□ 3.13
PACSIN3-204ENST00000528201 ATRNO75882 1429 aa34.59■■■■□ 3.13
PACSIN3-204ENST00000528201 PLEKHG5O94827 1062 aa34.58■■■■□ 3.13
PACSIN3-204ENST00000528201 TRPC5Q9UL62 973 aaPredicted RBP34.58■■■■□ 3.13
PACSIN3-204ENST00000528201 LMOD2Q6P5Q4 547 aa34.57■■■■□ 3.12
PACSIN3-204ENST00000528201 NUDT16Q96DE0 195 aaKnown RBP34.57■■■■□ 3.12
PACSIN3-204ENST00000528201 CDK19Q9BWU1 502 aa34.57■■■■□ 3.12
PACSIN3-204ENST00000528201 ARHGEF10O15013 1369 aa34.55■■■■□ 3.12
PACSIN3-204ENST00000528201 UPF1Q92900 1129 aaKnown RBP eCLIP34.54■■■■□ 3.12
PACSIN3-204ENST00000528201 TRPM3Q9HCF6 1732 aaPredicted RBP34.52■■■■□ 3.12
PACSIN3-204ENST00000528201 GPRASP1Q5JY77 1395 aa34.52■■■■□ 3.12
PACSIN3-204ENST00000528201 SLIT2O94813 1529 aa34.51■■■■□ 3.12
PACSIN3-204ENST00000528201 NGDNQ8NEJ9 315 aaKnown RBP34.51■■■■□ 3.12
PACSIN3-204ENST00000528201 MARF1Q9Y4F3 1742 aaKnown RBP34.51■■■■□ 3.12
PACSIN3-204ENST00000528201 CENPJQ9HC77 1338 aaPredicted RBP34.49■■■■□ 3.11
PACSIN3-204ENST00000528201 HAP1P54257 671 aaPredicted RBP34.47■■■■□ 3.11
PACSIN3-204ENST00000528201 UNC5CLQ8IV45 518 aa34.46■■■■□ 3.11
PACSIN3-204ENST00000528201 ALS2Q96Q42 1657 aa34.44■■■■□ 3.1
PACSIN3-204ENST00000528201 ABCA3Q99758 1704 aa34.44■■■■□ 3.1
PACSIN3-204ENST00000528201 TRIM26Q12899 539 aaPredicted RBP34.43■■■■□ 3.1
PACSIN3-204ENST00000528201 NBPF8Q3BBV2 869 aa34.43■■■■□ 3.1
PACSIN3-204ENST00000528201 CCDC61Q9Y6R9 512 aa34.43■■■■□ 3.1
PACSIN3-204ENST00000528201 GJD4Q96KN9 370 aaPredicted RBP34.42■■■■□ 3.1
PACSIN3-204ENST00000528201 TRPM1Q7Z4N2 1603 aa34.41■■■■□ 3.1
PACSIN3-204ENST00000528201 POLR3AO14802 1390 aaPredicted RBP34.41■■■■□ 3.1
PACSIN3-204ENST00000528201 FAM83GA6ND36 823 aa34.4■■■■□ 3.1
PACSIN3-204ENST00000528201 PAK3O75914 559 aaPredicted RBP34.4■■■■□ 3.1
PACSIN3-204ENST00000528201 TOPAZ1Q8N9V7 1692 aa34.4■■■■□ 3.1
PACSIN3-204ENST00000528201 ACEP12821 1306 aa34.39■■■■□ 3.1
PACSIN3-204ENST00000528201 PLEKHG3A1L390 1219 aa34.39■■■■□ 3.1
PACSIN3-204ENST00000528201 CABP2Q9NPB3 220 aa34.39■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms