RNA–Protein interactions for RNA: ENST00000528048.5

SDHD-205, Transcript of succinate dehydrogenase complex subunit D, humanhuman

TSL 1 (best) BASIC

Gene SDHD, Length 905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHD-205ENST00000528048 MYOM2P54296 1465 aa17.45■□□□□ 0.38
SDHD-205ENST00000528048 DCCP43146 1447 aa17.44■□□□□ 0.38
SDHD-205ENST00000528048 YTHDC2Q9H6S0 1430 aaKnown RBP17.44■□□□□ 0.38
SDHD-205ENST00000528048 TRAK1Q9UPV9 953 aa17.43■□□□□ 0.38
SDHD-205ENST00000528048 ADGRL3Q9HAR2 1447 aa17.43■□□□□ 0.38
SDHD-205ENST00000528048 NRXN1Q9ULB1 1477 aa17.43■□□□□ 0.38
SDHD-205ENST00000528048 DISP3Q9P2K9 1392 aa17.42■□□□□ 0.38
SDHD-205ENST00000528048 BRINP3Q76B58 766 aa17.42■□□□□ 0.38
SDHD-205ENST00000528048 L3MBTL2Q969R5 705 aa17.42■□□□□ 0.38
SDHD-205ENST00000528048 PCGF6Q9BYE7 350 aa17.42■□□□□ 0.38
SDHD-205ENST00000528048 SAFB2Q14151 953 aaKnown RBP eCLIP17.41■□□□□ 0.38
SDHD-205ENST00000528048 PRAM1Q96QH2 718 aa17.41■□□□□ 0.38
SDHD-205ENST00000528048 PPLO60437 1756 aa17.4■□□□□ 0.38
SDHD-205ENST00000528048 PRAG1Q86YV5 1406 aa17.4■□□□□ 0.38
SDHD-205ENST00000528048 TECPR2O15040 1411 aa17.38■□□□□ 0.37
SDHD-205ENST00000528048 XRN1Q8IZH2 1706 aaKnown RBP17.38■□□□□ 0.37
SDHD-205ENST00000528048 ESCO1Q5FWF5 840 aa17.38■□□□□ 0.37
SDHD-205ENST00000528048 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
SDHD-205ENST00000528048 MYCNP04198 464 aaPredicted RBP17.37■□□□□ 0.37
SDHD-205ENST00000528048 PLEKHH1Q9ULM0 1364 aa17.37■□□□□ 0.37
SDHD-205ENST00000528048 ORAI2Q96SN7 254 aa17.36■□□□□ 0.37
SDHD-205ENST00000528048 MST1RQ04912 1400 aa17.36■□□□□ 0.37
SDHD-205ENST00000528048 LRRC59Q96AG4 307 aaKnown RBP17.35■□□□□ 0.37
SDHD-205ENST00000528048 XIRP1Q702N8 1843 aaKnown RBP17.33■□□□□ 0.37
SDHD-205ENST00000528048 C1orf167Q5SNV9 1468 aa17.33■□□□□ 0.37
SDHD-205ENST00000528048 JCADQ9P266 1359 aa17.33■□□□□ 0.36
SDHD-205ENST00000528048 NBPF1Q3BBV0 1214 aa17.33■□□□□ 0.36
SDHD-205ENST00000528048 TONSLQ96HA7 1378 aa17.32■□□□□ 0.36
SDHD-205ENST00000528048 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.32■□□□□ 0.36
SDHD-205ENST00000528048 MINK1Q8N4C8 1332 aaPredicted RBP17.31■□□□□ 0.36
SDHD-205ENST00000528048 DDX17Q92841 729 aaKnown RBP17.31■□□□□ 0.36
SDHD-205ENST00000528048 HIRIP3Q9BW71 556 aaPredicted RBP17.31■□□□□ 0.36
SDHD-205ENST00000528048 ASXL1Q8IXJ9 1541 aa17.3■□□□□ 0.36
SDHD-205ENST00000528048 IFT172Q9UG01 1749 aa17.3■□□□□ 0.36
SDHD-205ENST00000528048 ROBO1Q9Y6N7 1651 aa17.29■□□□□ 0.36
SDHD-205ENST00000528048 FOXO3O43524 673 aa17.29■□□□□ 0.36
SDHD-205ENST00000528048 NPHP3Q7Z494 1330 aa17.28■□□□□ 0.36
SDHD-205ENST00000528048 SETD1AO15047 1707 aaKnown RBP17.28■□□□□ 0.36
SDHD-205ENST00000528048 MEX3CQ5U5Q3 659 aaKnown RBP17.28■□□□□ 0.36
SDHD-205ENST00000528048 SPATA31A6Q5VVP1 1343 aa17.27■□□□□ 0.36
SDHD-205ENST00000528048 WASLO00401 505 aaPredicted RBP17.27■□□□□ 0.36
SDHD-205ENST00000528048 LAMC1P11047 1609 aa17.27■□□□□ 0.36
SDHD-205ENST00000528048 NUTM2BA6NNL0 878 aaPredicted RBP17.26■□□□□ 0.35
SDHD-205ENST00000528048 NUTM2EB1AL46 878 aaPredicted RBP17.26■□□□□ 0.35
SDHD-205ENST00000528048 NUTM2AQ8IVF1 878 aaPredicted RBP17.26■□□□□ 0.35
SDHD-205ENST00000528048 PHF8Q9UPP1 1060 aa17.26■□□□□ 0.35
SDHD-205ENST00000528048 ADGRB1O14514 1584 aa17.26■□□□□ 0.35
SDHD-205ENST00000528048 DLC1Q96QB1 1528 aa17.26■□□□□ 0.35
SDHD-205ENST00000528048 PSME1Q06323 249 aa17.25■□□□□ 0.35
SDHD-205ENST00000528048 EIF3AQ14152 1382 aaKnown RBP17.25■□□□□ 0.35
SDHD-205ENST00000528048 SOS2Q07890 1332 aaPredicted RBP17.24■□□□□ 0.35
SDHD-205ENST00000528048 ROCK2O75116 1388 aaKnown RBP17.24■□□□□ 0.35
SDHD-205ENST00000528048 XPCQ01831 940 aaPredicted RBP17.23■□□□□ 0.35
SDHD-205ENST00000528048 KRT28Q7Z3Y7 464 aa17.23■□□□□ 0.35
SDHD-205ENST00000528048 CDK19Q9BWU1 502 aa17.23■□□□□ 0.35
SDHD-205ENST00000528048 CENPJQ9HC77 1338 aaPredicted RBP17.22■□□□□ 0.35
SDHD-205ENST00000528048 NBPF8Q3BBV2 869 aa17.22■□□□□ 0.35
SDHD-205ENST00000528048 PMFBP1Q8TBY8 1022 aa17.22■□□□□ 0.35
SDHD-205ENST00000528048 CCER1Q8TC90 406 aaPredicted RBP17.22■□□□□ 0.35
SDHD-205ENST00000528048 RBM42Q9BTD8 480 aaKnown RBP17.22■□□□□ 0.35
SDHD-205ENST00000528048 CDC42BPGQ6DT37 1551 aa17.21■□□□□ 0.35
SDHD-205ENST00000528048 CARD11Q9BXL7 1154 aa17.21■□□□□ 0.35
SDHD-205ENST00000528048 AHDC1Q5TGY3 1603 aaPredicted RBP17.21■□□□□ 0.35
SDHD-205ENST00000528048 CLSPNQ9HAW4 1339 aa17.21■□□□□ 0.34
SDHD-205ENST00000528048 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
SDHD-205ENST00000528048 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
SDHD-205ENST00000528048 NALCNQ8IZF0 1738 aa17.2■□□□□ 0.34
SDHD-205ENST00000528048 SRPK2P78362 688 aaKnown RBP17.19■□□□□ 0.34
SDHD-205ENST00000528048 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
SDHD-205ENST00000528048 POLA2Q14181 598 aa17.18■□□□□ 0.34
SDHD-205ENST00000528048 LMOD2Q6P5Q4 547 aa17.18■□□□□ 0.34
SDHD-205ENST00000528048 ANKARQ7Z5J8 1434 aa17.18■□□□□ 0.34
SDHD-205ENST00000528048 PHLPP1O60346 1717 aa17.18■□□□□ 0.34
SDHD-205ENST00000528048 MED1Q15648 1581 aaPredicted RBP17.17■□□□□ 0.34
SDHD-205ENST00000528048 ILDR2Q71H61 639 aa17.17■□□□□ 0.34
SDHD-205ENST00000528048 KNDC1Q76NI1 1749 aa17.17■□□□□ 0.34
SDHD-205ENST00000528048 CCDC61Q9Y6R9 512 aa17.17■□□□□ 0.34
SDHD-205ENST00000528048 GPRASP1Q5JY77 1395 aa17.16■□□□□ 0.34
SDHD-205ENST00000528048 PNPLA6Q8IY17 1366 aa17.15■□□□□ 0.34
SDHD-205ENST00000528048 ADAMTS2O95450 1211 aa17.15■□□□□ 0.34
SDHD-205ENST00000528048 HAP1P54257 671 aaPredicted RBP17.15■□□□□ 0.34
SDHD-205ENST00000528048 ZNF772Q68DY9 489 aaPredicted RBP17.15■□□□□ 0.34
SDHD-205ENST00000528048 EVC2Q86UK5 1308 aa17.15■□□□□ 0.34
SDHD-205ENST00000528048 PRR36Q9H6K5 1346 aa17.15■□□□□ 0.34
SDHD-205ENST00000528048 NGLY1Q96IV0 654 aa17.14■□□□□ 0.33
SDHD-205ENST00000528048 C8orf37Q96NL8 207 aa17.14■□□□□ 0.33
SDHD-205ENST00000528048 SPATA31A3Q5VYP0 1347 aa17.14■□□□□ 0.33
SDHD-205ENST00000528048 COL16A1Q07092 1604 aaPredicted RBP17.14■□□□□ 0.33
SDHD-205ENST00000528048 CABP2Q9NPB3 220 aa17.13■□□□□ 0.33
SDHD-205ENST00000528048 RGS17Q9UGC6 210 aaPredicted RBP17.13■□□□□ 0.33
SDHD-205ENST00000528048 PAK3O75914 559 aaPredicted RBP17.12■□□□□ 0.33
SDHD-205ENST00000528048 PLEKHG5O94827 1062 aa17.11■□□□□ 0.33
SDHD-205ENST00000528048 PLEKHG3A1L390 1219 aa17.1■□□□□ 0.33
SDHD-205ENST00000528048 SLC24A1O60721 1099 aa17.1■□□□□ 0.33
SDHD-205ENST00000528048 SBNO1A3KN83 1393 aa17.1■□□□□ 0.33
SDHD-205ENST00000528048 KIAA1210Q9ULL0 1709 aa17.1■□□□□ 0.33
SDHD-205ENST00000528048 POTEAQ6S8J7 498 aa17.09■□□□□ 0.33
SDHD-205ENST00000528048 TULP4Q9NRJ4 1543 aa17.08■□□□□ 0.32
SDHD-205ENST00000528048 ACEP12821 1306 aa17.08■□□□□ 0.32
SDHD-205ENST00000528048 PXDNQ92626 1479 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms