RNA–Protein interactions for RNA: ENST00000527947.5

RAE1-209, Transcript of ribonucleic acid export 1, humanhuman

TSL 1 (best) BASIC

Gene RAE1, Length 1,503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1-209ENST00000527947 KNDC1Q76NI1 1749 aa17.51■□□□□ 0.39
RAE1-209ENST00000527947 DCAF11Q8TEB1 546 aa17.5■□□□□ 0.39
RAE1-209ENST00000527947 DDX17Q92841 729 aaKnown RBP17.5■□□□□ 0.39
RAE1-209ENST00000527947 STK26Q9P289 416 aa17.5■□□□□ 0.39
RAE1-209ENST00000527947 YTHDC2Q9H6S0 1430 aaKnown RBP17.5■□□□□ 0.39
RAE1-209ENST00000527947 TMEM132EQ6IEE7 984 aa17.49■□□□□ 0.39
RAE1-209ENST00000527947 DHX57Q6P158 1386 aaKnown RBP17.49■□□□□ 0.39
RAE1-209ENST00000527947 PNPLA6Q8IY17 1366 aa17.49■□□□□ 0.39
RAE1-209ENST00000527947 ORAI2Q96SN7 254 aa17.48■□□□□ 0.39
RAE1-209ENST00000527947 PLEKHH1Q9ULM0 1364 aa17.47■□□□□ 0.39
RAE1-209ENST00000527947 SOS2Q07890 1332 aaPredicted RBP17.47■□□□□ 0.39
RAE1-209ENST00000527947 ZNF772Q68DY9 489 aaPredicted RBP17.47■□□□□ 0.39
RAE1-209ENST00000527947 WAPLQ7Z5K2 1190 aa17.47■□□□□ 0.39
RAE1-209ENST00000527947 SIRT1Q96EB6 747 aa17.47■□□□□ 0.39
RAE1-209ENST00000527947 KDM2AQ9Y2K7 1162 aa17.47■□□□□ 0.39
RAE1-209ENST00000527947 NUTM2BA6NNL0 878 aaPredicted RBP17.46■□□□□ 0.39
RAE1-209ENST00000527947 NUTM2EB1AL46 878 aaPredicted RBP17.46■□□□□ 0.39
RAE1-209ENST00000527947 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
RAE1-209ENST00000527947 NUTM2AQ8IVF1 878 aaPredicted RBP17.46■□□□□ 0.39
RAE1-209ENST00000527947 ESCO1Q5FWF5 840 aa17.42■□□□□ 0.38
RAE1-209ENST00000527947 SIN3AQ96ST3 1273 aa17.42■□□□□ 0.38
RAE1-209ENST00000527947 NPHP3Q7Z494 1330 aa17.41■□□□□ 0.38
RAE1-209ENST00000527947 DLC1Q96QB1 1528 aa17.41■□□□□ 0.38
RAE1-209ENST00000527947 PXDNQ92626 1479 aa17.4■□□□□ 0.38
RAE1-209ENST00000527947 FMN2Q9NZ56 1722 aa17.4■□□□□ 0.38
RAE1-209ENST00000527947 AFF2P51816 1311 aa17.4■□□□□ 0.38
RAE1-209ENST00000527947 ADGRB1O14514 1584 aa17.39■□□□□ 0.38
RAE1-209ENST00000527947 COL22A1Q8NFW1 1626 aaPredicted RBP17.38■□□□□ 0.37
RAE1-209ENST00000527947 NEUROD1Q13562 356 aa17.38■□□□□ 0.37
RAE1-209ENST00000527947 L3MBTL2Q969R5 705 aa17.37■□□□□ 0.37
RAE1-209ENST00000527947 NUTM2FA1L443 756 aa17.37■□□□□ 0.37
RAE1-209ENST00000527947 FOXO3O43524 673 aa17.37■□□□□ 0.37
RAE1-209ENST00000527947 C8orf37Q96NL8 207 aa17.37■□□□□ 0.37
RAE1-209ENST00000527947 PRAM1Q96QH2 718 aa17.37■□□□□ 0.37
RAE1-209ENST00000527947 PCGF6Q9BYE7 350 aa17.37■□□□□ 0.37
RAE1-209ENST00000527947 KIF1AQ12756 1690 aa17.36■□□□□ 0.37
RAE1-209ENST00000527947 CDK12Q9NYV4 1490 aaPredicted RBP17.35■□□□□ 0.37
RAE1-209ENST00000527947 RXRBP28702 533 aa17.35■□□□□ 0.37
RAE1-209ENST00000527947 KIAA1210Q9ULL0 1709 aa17.35■□□□□ 0.37
RAE1-209ENST00000527947 ADAMTS2O95450 1211 aa17.34■□□□□ 0.37
RAE1-209ENST00000527947 ADGRB2O60241 1585 aa17.33■□□□□ 0.37
RAE1-209ENST00000527947 XPCQ01831 940 aaPredicted RBP17.33■□□□□ 0.37
RAE1-209ENST00000527947 POGKQ9P215 609 aa17.32■□□□□ 0.36
RAE1-209ENST00000527947 SAFB2Q14151 953 aaKnown RBP eCLIP17.31■□□□□ 0.36
RAE1-209ENST00000527947 NGLY1Q96IV0 654 aa17.31■□□□□ 0.36
RAE1-209ENST00000527947 ANKARQ7Z5J8 1434 aa17.31■□□□□ 0.36
RAE1-209ENST00000527947 PHF8Q9UPP1 1060 aa17.31■□□□□ 0.36
RAE1-209ENST00000527947 TRAK1Q9UPV9 953 aa17.31■□□□□ 0.36
RAE1-209ENST00000527947 QTRT2Q9H974 415 aaKnown RBP17.3■□□□□ 0.36
RAE1-209ENST00000527947 SPATA31A3Q5VYP0 1347 aa17.3■□□□□ 0.36
RAE1-209ENST00000527947 RBM6P78332 1123 aaKnown RBP17.28■□□□□ 0.36
RAE1-209ENST00000527947 KRT28Q7Z3Y7 464 aa17.28■□□□□ 0.36
RAE1-209ENST00000527947 FNBP4Q8N3X1 1017 aaPredicted RBP17.28■□□□□ 0.36
RAE1-209ENST00000527947 NBPF1Q3BBV0 1214 aa17.27■□□□□ 0.36
RAE1-209ENST00000527947 USP21Q9UK80 565 aa17.27■□□□□ 0.36
RAE1-209ENST00000527947 EIF3AQ14152 1382 aaKnown RBP17.27■□□□□ 0.36
RAE1-209ENST00000527947 USP32Q8NFA0 1604 aa17.27■□□□□ 0.36
RAE1-209ENST00000527947 RGS12O14924 1447 aa17.27■□□□□ 0.35
RAE1-209ENST00000527947 TNS3Q68CZ2 1445 aa17.27■□□□□ 0.35
RAE1-209ENST00000527947 TONSLQ96HA7 1378 aa17.27■□□□□ 0.35
RAE1-209ENST00000527947 CLSPNQ9HAW4 1339 aa17.26■□□□□ 0.35
RAE1-209ENST00000527947 SBNO1A3KN83 1393 aa17.26■□□□□ 0.35
RAE1-209ENST00000527947 PSME1Q06323 249 aa17.26■□□□□ 0.35
RAE1-209ENST00000527947 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
RAE1-209ENST00000527947 HIRIP3Q9BW71 556 aaPredicted RBP17.25■□□□□ 0.35
RAE1-209ENST00000527947 TRPC5Q9UL62 973 aaPredicted RBP17.25■□□□□ 0.35
RAE1-209ENST00000527947 TULP4Q9NRJ4 1543 aa17.24■□□□□ 0.35
RAE1-209ENST00000527947 ATRNO75882 1429 aa17.24■□□□□ 0.35
RAE1-209ENST00000527947 RGPD8O14715 1765 aaPredicted RBP17.24■□□□□ 0.35
RAE1-209ENST00000527947 UPF1Q92900 1129 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAE1-209ENST00000527947 BCL9LQ86UU0 1499 aa17.23■□□□□ 0.35
RAE1-209ENST00000527947 ARHGEF28Q8N1W1 1705 aaKnown RBP17.23■□□□□ 0.35
RAE1-209ENST00000527947 MARF1Q9Y4F3 1742 aaKnown RBP17.23■□□□□ 0.35
RAE1-209ENST00000527947 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
RAE1-209ENST00000527947 WASLO00401 505 aaPredicted RBP17.22■□□□□ 0.35
RAE1-209ENST00000527947 TRPM1Q7Z4N2 1603 aa17.22■□□□□ 0.35
RAE1-209ENST00000527947 ARHGEF10O15013 1369 aa17.22■□□□□ 0.35
RAE1-209ENST00000527947 NBPF8Q3BBV2 869 aa17.21■□□□□ 0.34
RAE1-209ENST00000527947 PMFBP1Q8TBY8 1022 aa17.21■□□□□ 0.34
RAE1-209ENST00000527947 TIMELESSQ9UNS1 1208 aa17.19■□□□□ 0.34
RAE1-209ENST00000527947 SLIT2O94813 1529 aa17.19■□□□□ 0.34
RAE1-209ENST00000527947 ROCK2O75116 1388 aaKnown RBP17.19■□□□□ 0.34
RAE1-209ENST00000527947 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.17■□□□□ 0.34
RAE1-209ENST00000527947 TRPM3Q9HCF6 1732 aaPredicted RBP17.17■□□□□ 0.34
RAE1-209ENST00000527947 GPRASP1Q5JY77 1395 aa17.17■□□□□ 0.34
RAE1-209ENST00000527947 ATP7BP35670 1465 aa17.17■□□□□ 0.34
RAE1-209ENST00000527947 CENPJQ9HC77 1338 aaPredicted RBP17.16■□□□□ 0.34
RAE1-209ENST00000527947 HAP1P54257 671 aaPredicted RBP17.16■□□□□ 0.34
RAE1-209ENST00000527947 LMOD2Q6P5Q4 547 aa17.16■□□□□ 0.34
RAE1-209ENST00000527947 UNC5CLQ8IV45 518 aa17.16■□□□□ 0.34
RAE1-209ENST00000527947 CABLES1Q8TDN4 633 aa17.16■□□□□ 0.34
RAE1-209ENST00000527947 ABCA3Q99758 1704 aa17.15■□□□□ 0.34
RAE1-209ENST00000527947 CCER1Q8TC90 406 aaPredicted RBP17.14■□□□□ 0.33
RAE1-209ENST00000527947 NUDT16Q96DE0 195 aaKnown RBP17.14■□□□□ 0.33
RAE1-209ENST00000527947 GJD4Q96KN9 370 aaPredicted RBP17.14■□□□□ 0.33
RAE1-209ENST00000527947 ALS2Q96Q42 1657 aa17.14■□□□□ 0.33
RAE1-209ENST00000527947 RALGAPBQ86X10 1494 aa17.14■□□□□ 0.33
RAE1-209ENST00000527947 ATAD2Q6PL18 1390 aa17.13■□□□□ 0.33
RAE1-209ENST00000527947 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
RAE1-209ENST00000527947 CDK19Q9BWU1 502 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms