RNA–Protein interactions for RNA: ENST00000527817.1

SRPRA-202, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2

Gene SRPRA, Length 687 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-202ENST00000527817 HFM1A2PYH4 1435 aa18.71■□□□□ 0.59
SRPRA-202ENST00000527817 NPHP3Q7Z494 1330 aa18.71■□□□□ 0.59
SRPRA-202ENST00000527817 ESCO1Q5FWF5 840 aa18.7■□□□□ 0.58
SRPRA-202ENST00000527817 KIF1BO60333 1816 aa18.7■□□□□ 0.58
SRPRA-202ENST00000527817 GJD4Q96KN9 370 aaPredicted RBP18.69■□□□□ 0.58
SRPRA-202ENST00000527817 COL22A1Q8NFW1 1626 aaPredicted RBP18.69■□□□□ 0.58
SRPRA-202ENST00000527817 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
SRPRA-202ENST00000527817 MYOM2P54296 1465 aa18.68■□□□□ 0.58
SRPRA-202ENST00000527817 FOXO3O43524 673 aa18.66■□□□□ 0.58
SRPRA-202ENST00000527817 LRPPRCP42704 1394 aaKnown RBP18.64■□□□□ 0.57
SRPRA-202ENST00000527817 UNC5CLQ8IV45 518 aa18.63■□□□□ 0.57
SRPRA-202ENST00000527817 PXDNQ92626 1479 aa18.63■□□□□ 0.57
SRPRA-202ENST00000527817 NAIPQ13075 1403 aa18.61■□□□□ 0.57
SRPRA-202ENST00000527817 XPCQ01831 940 aaPredicted RBP18.61■□□□□ 0.57
SRPRA-202ENST00000527817 PPARGC1BQ86YN6 1023 aaKnown RBP18.61■□□□□ 0.57
SRPRA-202ENST00000527817 WAPLQ7Z5K2 1190 aa18.59■□□□□ 0.57
SRPRA-202ENST00000527817 MARF1Q9Y4F3 1742 aaKnown RBP18.59■□□□□ 0.57
SRPRA-202ENST00000527817 CDC42BPGQ6DT37 1551 aa18.59■□□□□ 0.57
SRPRA-202ENST00000527817 SPATA31A3Q5VYP0 1347 aa18.58■□□□□ 0.57
SRPRA-202ENST00000527817 SLC4A1APQ9BWU0 796 aaKnown RBP18.58■□□□□ 0.56
SRPRA-202ENST00000527817 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
SRPRA-202ENST00000527817 NUTM2FA1L443 756 aa18.57■□□□□ 0.56
SRPRA-202ENST00000527817 SLIT2O94813 1529 aa18.57■□□□□ 0.56
SRPRA-202ENST00000527817 ADGRF5Q8IZF2 1346 aa18.56■□□□□ 0.56
SRPRA-202ENST00000527817 PPLO60437 1756 aa18.56■□□□□ 0.56
SRPRA-202ENST00000527817 STK26Q9P289 416 aa18.56■□□□□ 0.56
SRPRA-202ENST00000527817 RALGAPBQ86X10 1494 aa18.56■□□□□ 0.56
SRPRA-202ENST00000527817 ABCC11Q96J66 1382 aa18.55■□□□□ 0.56
SRPRA-202ENST00000527817 ONECUT3O60422 494 aaPredicted RBP18.55■□□□□ 0.56
SRPRA-202ENST00000527817 KRT28Q7Z3Y7 464 aa18.55■□□□□ 0.56
SRPRA-202ENST00000527817 TECPR2O15040 1411 aa18.55■□□□□ 0.56
SRPRA-202ENST00000527817 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.54■□□□□ 0.56
SRPRA-202ENST00000527817 SF3B2Q13435 895 aaKnown RBP18.53■□□□□ 0.56
SRPRA-202ENST00000527817 VPS72Q15906 364 aa18.53■□□□□ 0.56
SRPRA-202ENST00000527817 DEFB132Q7Z7B7 95 aa18.53■□□□□ 0.56
SRPRA-202ENST00000527817 SEPT12Q8IYM1 358 aa18.53■□□□□ 0.56
SRPRA-202ENST00000527817 SIRT1Q96EB6 747 aa18.53■□□□□ 0.56
SRPRA-202ENST00000527817 RRBP1Q9P2E9 1410 aaKnown RBP18.53■□□□□ 0.56
SRPRA-202ENST00000527817 GLI3P10071 1580 aa18.52■□□□□ 0.56
SRPRA-202ENST00000527817 PSME1Q06323 249 aa18.51■□□□□ 0.55
SRPRA-202ENST00000527817 RGL3Q3MIN7 710 aa18.51■□□□□ 0.55
SRPRA-202ENST00000527817 TMEM132EQ6IEE7 984 aa18.51■□□□□ 0.55
SRPRA-202ENST00000527817 CCDC144AA2RUR9 1427 aa18.5■□□□□ 0.55
SRPRA-202ENST00000527817 ANKRD30BQ9BXX2 1392 aa18.5■□□□□ 0.55
SRPRA-202ENST00000527817 PLEKHH1Q9ULM0 1364 aa18.5■□□□□ 0.55
SRPRA-202ENST00000527817 BRWD3Q6RI45 1802 aa18.47■□□□□ 0.55
SRPRA-202ENST00000527817 HAP1P54257 671 aaPredicted RBP18.47■□□□□ 0.55
SRPRA-202ENST00000527817 KRT27Q7Z3Y8 459 aa18.47■□□□□ 0.55
SRPRA-202ENST00000527817 PHF8Q9UPP1 1060 aa18.47■□□□□ 0.55
SRPRA-202ENST00000527817 CABLES1Q8TDN4 633 aa18.46■□□□□ 0.55
SRPRA-202ENST00000527817 SPATA31E1Q6ZUB1 1445 aa18.46■□□□□ 0.55
SRPRA-202ENST00000527817 YTHDC2Q9H6S0 1430 aaKnown RBP18.45■□□□□ 0.54
SRPRA-202ENST00000527817 FMN2Q9NZ56 1722 aa18.45■□□□□ 0.54
SRPRA-202ENST00000527817 USP32Q8NFA0 1604 aa18.45■□□□□ 0.54
SRPRA-202ENST00000527817 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
SRPRA-202ENST00000527817 SBNO1A3KN83 1393 aa18.44■□□□□ 0.54
SRPRA-202ENST00000527817 CCDC9Q9Y3X0 531 aaKnown RBP18.44■□□□□ 0.54
SRPRA-202ENST00000527817 TNS3Q68CZ2 1445 aa18.43■□□□□ 0.54
SRPRA-202ENST00000527817 FAM83GA6ND36 823 aa18.43■□□□□ 0.54
SRPRA-202ENST00000527817 C14orf93Q9H972 538 aaKnown RBP18.43■□□□□ 0.54
SRPRA-202ENST00000527817 KNDC1Q76NI1 1749 aa18.43■□□□□ 0.54
SRPRA-202ENST00000527817 BAG6P46379 1132 aa18.42■□□□□ 0.54
SRPRA-202ENST00000527817 PIK3C2GO75747 1445 aa18.41■□□□□ 0.54
SRPRA-202ENST00000527817 LMOD2Q6P5Q4 547 aa18.41■□□□□ 0.54
SRPRA-202ENST00000527817 ARHGEF10O15013 1369 aa18.41■□□□□ 0.54
SRPRA-202ENST00000527817 MPHOSPH9Q99550 1183 aa18.4■□□□□ 0.54
SRPRA-202ENST00000527817 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
SRPRA-202ENST00000527817 HRCP23327 699 aa18.39■□□□□ 0.53
SRPRA-202ENST00000527817 DHX57Q6P158 1386 aaKnown RBP18.39■□□□□ 0.53
SRPRA-202ENST00000527817 LRP5O75197 1615 aa18.38■□□□□ 0.53
SRPRA-202ENST00000527817 NRXN1Q9ULB1 1477 aa18.38■□□□□ 0.53
SRPRA-202ENST00000527817 IFT172Q9UG01 1749 aa18.37■□□□□ 0.53
SRPRA-202ENST00000527817 RGPD8O14715 1765 aaPredicted RBP18.37■□□□□ 0.53
SRPRA-202ENST00000527817 PLEKHG5O94827 1062 aa18.37■□□□□ 0.53
SRPRA-202ENST00000527817 PSDA5PKW4 1024 aaPredicted RBP18.36■□□□□ 0.53
SRPRA-202ENST00000527817 FAM98CQ17RN3 349 aaKnown RBP18.36■□□□□ 0.53
SRPRA-202ENST00000527817 CFAP70Q5T0N1 1121 aa18.36■□□□□ 0.53
SRPRA-202ENST00000527817 BTG4Q9NY30 223 aa18.36■□□□□ 0.53
SRPRA-202ENST00000527817 PLCH1Q4KWH8 1693 aa18.35■□□□□ 0.53
SRPRA-202ENST00000527817 A0A0G2JS52 829 aa18.35■□□□□ 0.53
SRPRA-202ENST00000527817 MYT1Q01538 1121 aa18.35■□□□□ 0.53
SRPRA-202ENST00000527817 PMFBP1Q8TBY8 1022 aa18.35■□□□□ 0.53
SRPRA-202ENST00000527817 PRAM1Q96QH2 718 aa18.35■□□□□ 0.53
SRPRA-202ENST00000527817 EN1Q05925 392 aaPredicted RBP18.34■□□□□ 0.53
SRPRA-202ENST00000527817 SAFB2Q14151 953 aaKnown RBP eCLIP18.33■□□□□ 0.52
SRPRA-202ENST00000527817 ANKARQ7Z5J8 1434 aa18.32■□□□□ 0.52
SRPRA-202ENST00000527817 POGKQ9P215 609 aa18.32■□□□□ 0.52
SRPRA-202ENST00000527817 SPATA31A5Q5VU36 1347 aa18.3■□□□□ 0.52
SRPRA-202ENST00000527817 SPATA31A7Q8IWB4 1347 aa18.3■□□□□ 0.52
SRPRA-202ENST00000527817 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
SRPRA-202ENST00000527817 GPRASP1Q5JY77 1395 aa18.29■□□□□ 0.52
SRPRA-202ENST00000527817 ACIN1Q9UKV3 1341 aaKnown RBP18.28■□□□□ 0.52
SRPRA-202ENST00000527817 R3HDM1Q15032 1099 aaKnown RBP18.28■□□□□ 0.52
SRPRA-202ENST00000527817 FAM182BQ5T319 152 aa18.28■□□□□ 0.52
SRPRA-202ENST00000527817 NRAPQ86VF7 1730 aa18.27■□□□□ 0.52
SRPRA-202ENST00000527817 DISP2A7MBM2 1401 aa18.27■□□□□ 0.52
SRPRA-202ENST00000527817 DLC1Q96QB1 1528 aa18.27■□□□□ 0.51
SRPRA-202ENST00000527817 COL14A1Q05707 1796 aaKnown RBP18.26■□□□□ 0.51
SRPRA-202ENST00000527817 EZH2Q15910 746 aaKnown RBP18.25■□□□□ 0.51
SRPRA-202ENST00000527817 CAMKK2Q96RR4 588 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms